>SPO11_CAEEL (Q22236) Meiotic recombination protein spo-11|
          Length = 425

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = -2

Query: 224 IFIPFQDTTDEYLVTTNFVALFSKSILETSIFFPTGTVATVSLFLLFS 81
           I +  +DTT + L+  NF A+F + IL TS  +P   +AT ++  + S
Sbjct: 198 ILVVEKDTTFQKLMDENFQAMFPRGILATSKGYP--DIATRNVLKMLS 243

>Y131_UREPA (Q9PR13) Hypothetical protein UU131|
          Length = 268

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -3

Query: 271 WDALGCHCHIRYVNHRSSFLFRTQQMNTW 185
           ++AL  H H +++NH  ++ F T+ ++ W
Sbjct: 124 YEALHYHAHSKFINHNGTWGFVTKVLSDW 152

>ACO1_AJECA (Q12618) Acyl-CoA desaturase (EC 1.14.19.1) (Stearoyl-CoA|
           desaturase) (Fatty acid desaturase)
           (Delta(9)-desaturase)
          Length = 476

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -3

Query: 364 QLLCHCSRMNAQMCADSTAEVGSPHLDGYLRWDALGCHCHIRYVN 230
           +L  HCS           A VG   ++G +RW A G   H RY +
Sbjct: 102 RLWAHCSYSATLPLKIYLAAVGGGAVEGSIRWWARGHRAHHRYTD 146

>YJGX_ECOLI (P39349) Hypothetical UPF0141 protein yjgX precursor|
          Length = 371

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
 Frame = +3

Query: 318 SAHICAFILLQW------HNNWMELRLYVFDQV 398
           SA I  F+++ W      H NW+ LRL+V   V
Sbjct: 14  SAAILVFVVIFWRTHHRDHRNWLALRLFVLCSV 46

>NU2M_BRALA (O21001) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 346

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = -2

Query: 215 PFQDTTDEYLVTTNFVALFSKSILETSIFFPTGTVATVSLFLLFSVICIRLRDCNKLLEG 36
           PF     ++L+ T+FV    + +L  S+   TGT+ ++  +L  S +CI +    +++ G
Sbjct: 256 PFFGFFGKWLLLTHFVG---QLLLGVSVVLITGTLISLFYYLRVSYLCIVVLGPQQIMSG 312

>NU2M_BRAFL (O47434) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 346

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = -2

Query: 215 PFQDTTDEYLVTTNFVALFSKSILETSIFFPTGTVATVSLFLLFSVICIRLRDCNKLLEG 36
           PF     ++L+ T+FV    + +L  S+   TGT+ ++  +L  S +CI +    +++ G
Sbjct: 256 PFFGFFGKWLLLTHFVG---QLLLGVSVVLITGTLISLFYYLRVSYLCIVVLGPQQIMSG 312

>PGS1_RAT (P47853) Biglycan precursor (Bone/cartilage proteoglycan I) (PG-S1)|
          Length = 369

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
 Frame = -3

Query: 340 MNAQMCADSTAEVGSPHLDG----YLRWDALGCHCHIRYV 233
           MN +  + S    G P LD     +      GCHCH+R V
Sbjct: 36  MNDEEASGSDTTSGVPDLDSLTPTFSAMCPFGCHCHLRVV 75

>PGS1_MOUSE (P28653) Biglycan precursor (Bone/cartilage proteoglycan I) (PG-S1)|
          Length = 369

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
 Frame = -3

Query: 340 MNAQMCADSTAEVGSPHLDG----YLRWDALGCHCHIRYV 233
           MN +  + S    G P LD     +      GCHCH+R V
Sbjct: 36  MNDEEASGSDTTSGVPDLDSVTPTFSAMCPFGCHCHLRVV 75

>KITH_HSVBM (P33802) Thymidine kinase (EC 2.7.1.21)|
          Length = 686

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 9/66 (13%)
 Frame = +1

Query: 214 GMKIYGL-RT*YGSDNPVHPI*GSRQGEGFQLQQWNLHTSVHSFCY--------NGTTTG 366
           G+K  GL R    +DNP          EGF  + W LH S  +F +        + T +G
Sbjct: 66  GLKPRGLVRPRQDADNP-------SSDEGFDWELWKLHLSTRAFSFLEPPRLSSSNTASG 118

Query: 367 WSSDCT 384
             S C+
Sbjct: 119 LRSSCS 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,592,194
Number of Sequences: 219361
Number of extensions: 1068913
Number of successful extensions: 2309
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2309
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)