Clone Name | rbastl38h05 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_464303.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3039 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Minus Query: 163 tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222 ||||||||||||||| ||||| | ||| || |||||||||||||| |||||||||| Sbjct: 3039 tcactctacagttatttgtaacagggttgtgagccttggttttctgtatctcctcaacca 2980 Query: 223 cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282 ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 2979 cagagaggaacatactacactaacagatgagaacgccatgcaagcaccagccagccaagg 2920 Query: 283 cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggcaacgat 342 ||||| || |||||| ||| ||||||||||| || ||||| || ||||| || | ||| Sbjct: 2919 tggcatttggaggccggtgaatgggaagagtgctccagcagcaaccgggatagcgatgat 2860 Query: 343 gttataagccatggcaaagaagtagttccaccggattcggctgaatgtcttccttgagag 402 ||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 2859 gttgtacgccatggcaaagaagtagttccatcggattcggctgaacgtcttccttgagag 2800
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 163 tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222 ||||||||||||||| ||||| | ||| || |||||||||||||| |||||||||| Sbjct: 3950585 tcactctacagttatttgtaacagggttgtgagccttggttttctgtatctcctcaacca 3950644 Query: 223 cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282 ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 3950645 cagagaggaacatactacactaacagatgagaacgccatgcaagcaccagccagccaagg 3950704 Query: 283 cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggcaacgat 342 ||||| || |||||| ||| ||||||||||| || ||||| || ||||| || | ||| Sbjct: 3950705 tggcatttggaggccggtgaatgggaagagtgctccagcagcaaccgggatagcgatgat 3950764 Query: 343 gttataagccatggcaaagaagtagttccaccggattcggctgaatgtcttccttgagag 402 ||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 3950765 gttgtacgccatggcaaagaagtagttccatcggattcggctgaacgtcttccttgagag 3950824
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 163 tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222 ||||||||||||||| ||||| | ||| || |||||||||||||| |||||||||| Sbjct: 149056 tcactctacagttatttgtaacagggttgtgagccttggttttctgtatctcctcaacca 149115 Query: 223 cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282 ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 149116 cagagaggaacatactacactaacagatgagaacgccatgcaagcaccagccagccaagg 149175 Query: 283 cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggcaacgat 342 ||||| || |||||| ||| ||||||||||| || ||||| || ||||| || | ||| Sbjct: 149176 tggcatttggaggccggtgaatgggaagagtgctccagcagcaaccgggatagcgatgat 149235 Query: 343 gttataagccatggcaaagaagtagttccaccggattcggctgaatgtcttccttgagag 402 ||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 149236 gttgtacgccatggcaaagaagtagttccatcggattcggctgaacgtcttccttgagag 149295
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 139 bits (70), Expect = 8e-30 Identities = 193/234 (82%) Strand = Plus / Plus Query: 163 tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222 |||||||||||||||||| || |||||||| ||||||||||| || || || |||| | Sbjct: 27133869 tcactctacagttatctgcaacacggtggtcagccttggtttcctgtaccttctcaacaa 27133928 Query: 223 cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282 ||||||||| || || || || || || ||||| |||||||| || || || ||||| || Sbjct: 27133929 cagcgaggagcacaccacgctgacggaggagaacgccatgcaggcgccggcgagccacgg 27133988 Query: 283 cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggcaacgat 342 |||||||||||| | ||| |||||| || |||||||| || || |||||||| || | Sbjct: 27133989 cggcatctgcagcctcgtgaaggggaacagcgcgccggcggcgaccgggatggcgaccac 27134048 Query: 343 gttataagccatggcaaagaagtagttccaccggattcggctgaatgtcttcct 396 ||| || |||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 27134049 gttgtacgccatggcgaagaagtagttccaccggatccggctgaacgtcttcct 27134102 Score = 75.8 bits (38), Expect = 1e-10 Identities = 140/174 (80%) Strand = Plus / Plus Query: 163 tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222 |||||||||||||||||| || | ||| || |||||||||||||| ||||| |||| | Sbjct: 27130822 tcactctacagttatctgcaacatggtcgtcagccttggttttctgtatcttctcaacaa 27130881 Query: 223 cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282 ||||||||| || || || | || || ||||| |||||||| || || || ||||| || Sbjct: 27130882 cagcgaggagcacaccacgccgacggaggagaacgccatgcaggcgccggcgagccacgg 27130941 Query: 283 cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggc 336 |||||||||||| | ||| |||||| || |||||||| || || |||||||| Sbjct: 27130942 cggcatctgcagcctcgtgaaggggaacagcgcgccggcggcgaccgggatggc 27130995 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 tgccatgtgcatttctttcaaatagaaa 137 ||||| ||||||||||||||||| |||| Sbjct: 13894359 tgccaagtgcatttctttcaaattgaaa 13894332
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 139 bits (70), Expect = 8e-30 Identities = 193/234 (82%) Strand = Plus / Plus Query: 163 tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222 |||||||||||||||||| || |||||||| ||||||||||| || || || |||| | Sbjct: 102679 tcactctacagttatctgcaacacggtggtcagccttggtttcctgtaccttctcaacaa 102738 Query: 223 cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282 ||||||||| || || || || || || ||||| |||||||| || || || ||||| || Sbjct: 102739 cagcgaggagcacaccacgctgacggaggagaacgccatgcaggcgccggcgagccacgg 102798 Query: 283 cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggcaacgat 342 |||||||||||| | ||| |||||| || |||||||| || || |||||||| || | Sbjct: 102799 cggcatctgcagcctcgtgaaggggaacagcgcgccggcggcgaccgggatggcgaccac 102858 Query: 343 gttataagccatggcaaagaagtagttccaccggattcggctgaatgtcttcct 396 ||| || |||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 102859 gttgtacgccatggcgaagaagtagttccaccggatccggctgaacgtcttcct 102912 Score = 75.8 bits (38), Expect = 1e-10 Identities = 140/174 (80%) Strand = Plus / Plus Query: 163 tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222 |||||||||||||||||| || | ||| || |||||||||||||| ||||| |||| | Sbjct: 99632 tcactctacagttatctgcaacatggtcgtcagccttggttttctgtatcttctcaacaa 99691 Query: 223 cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282 ||||||||| || || || | || || ||||| |||||||| || || || ||||| || Sbjct: 99692 cagcgaggagcacaccacgccgacggaggagaacgccatgcaggcgccggcgagccacgg 99751 Query: 283 cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggc 336 |||||||||||| | ||| |||||| || |||||||| || || |||||||| Sbjct: 99752 cggcatctgcagcctcgtgaaggggaacagcgcgccggcggcgaccgggatggc 99805
>gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33 (Tak33) genes, complete cds Length = 20754 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 13 ttgctttatttataaagtggggcgaaagcctttttgggta 52 ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 17259 ttgctttatttataaagcggggcgaaagcctttttcggta 17298
>emb|AJ512821.1|TAE512821 Triticum aestivum stB1.1a gene for sulphate transporter, exons 1-14, genome B Length = 4071 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 17 tttatttataaagtggggcgaaagcctttttgggtata 54 ||||||||||||| ||||||||||||||||| |||||| Sbjct: 324 tttatttataaagcggggcgaaagcctttttcggtata 287
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 13 ttgctttatttataaagtggggcgaaagccttttt 47 ||||||||||||||||| |||||||||||||||| Sbjct: 113309 ttgctttatttataaagcagggcgaaagccttttt 113275
>gb|DQ135974.1| Triticum aestivum clone wmc(20g4) anchored-SSR primer sequence Length = 374 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 13 ttgctttatttataaagtggggcgaaagcctttt 46 ||||||||||||||||| ||| |||||||||||| Sbjct: 46 ttgctttatttataaagcgggtcgaaagcctttt 13
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Minus Query: 12 gttgctttatttataaagtggggcgaaagccttttt 47 |||||||||| ||||||| ||| ||||||||||||| Sbjct: 19078 gttgctttatatataaagcgggacgaaagccttttt 19043
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Minus Query: 12 gttgctttatttataaagtggggcgaaagccttttt 47 |||||||||| |||||| ||||||||||||||||| Sbjct: 13456 gttgctttatacataaagcggggcgaaagccttttt 13421
>gb|DQ469713.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1040 gene, complete cds Length = 21799 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Minus Query: 12 gttgctttatttataaagtggggcgaaa 39 |||||||||| ||||||||||||||||| Sbjct: 13040 gttgctttatatataaagtggggcgaaa 13013
>gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete sequence Length = 137052 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Plus Query: 257 gccatgcaagcaccagccagccatggcggca 287 ||||||||||||||||| |||||||| |||| Sbjct: 9522 gccatgcaagcaccagcaagccatggtggca 9552
>gb|AF166121.1|AF166121 Hordeum vulgare Cf2/Cf5 disease resistance protein homolog (Big1) gene, complete cds Length = 7351 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 14 tgctttatttataaagtggggcgaaagcct 43 |||||||| ||||||| ||||||||||||| Sbjct: 6336 tgctttatctataaagcggggcgaaagcct 6307
>emb|BX005058.3| Zebrafish DNA sequence from clone CH211-112K3 in linkage group 17, complete sequence Length = 170139 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 ataagccatggcaaagaagtag 367 |||||||||||||||||||||| Sbjct: 108282 ataagccatggcaaagaagtag 108303
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 109 atgccatgtgcatttctttcaaatagaaa 137 |||||| ||||||||||||||||| |||| Sbjct: 53892 atgccaagtgcatttctttcaaattgaaa 53864
>gb|AC119806.6| Mus musculus chromosome 7, clone RP23-211A9, complete sequence Length = 215147 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 tcacttgattacaaacagatg 111 ||||||||||||||||||||| Sbjct: 4270 tcacttgattacaaacagatg 4250
>dbj|AK086324.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930021H04 product:unclassifiable, full insert sequence Length = 1798 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 tcacttgattacaaacagatg 111 ||||||||||||||||||||| Sbjct: 1311 tcacttgattacaaacagatg 1291
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 109 atgccatgtgcatttctttcaaatagaaa 137 |||||| ||||||||||||||||| |||| Sbjct: 29569390 atgccaagtgcatttctttcaaattgaaa 29569362
>gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome 7, complete sequence Length = 226264 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 tcacttgattacaaacagatg 111 ||||||||||||||||||||| Sbjct: 65193 tcacttgattacaaacagatg 65213
>gb|AC140269.3| Mus musculus BAC clone RP23-322I5 from chromosome 3, complete sequence Length = 205887 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ttttgggtatatgctattta 63 |||||||||||||||||||| Sbjct: 171211 ttttgggtatatgctattta 171192
>gb|AY358696.1| Homo sapiens clone DNA66309 serine/threonine-rich receptor (UNQ641) mRNA, complete cds Length = 1281 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cagccatggcggcatctgca 293 |||||||||||||||||||| Sbjct: 182 cagccatggcggcatctgca 201
>gb|AC134909.4| Mus musculus chromosome 3 clone RP23-402O2, complete sequence Length = 183831 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ttttgggtatatgctattta 63 |||||||||||||||||||| Sbjct: 177568 ttttgggtatatgctattta 177587
>gb|BC032296.1| Homo sapiens transmembrane protein 123, mRNA (cDNA clone MGC:40439 IMAGE:4340763), complete cds Length = 3282 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cagccatggcggcatctgca 293 |||||||||||||||||||| Sbjct: 197 cagccatggcggcatctgca 216
>emb|AL356131.12| Human DNA sequence from clone RP1-91N13 on chromosome 6 Contains a proteasome subunit alpha type 4 (PROS29) pseudogene, complete sequence Length = 170095 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ttggttttctatatctcctc 217 |||||||||||||||||||| Sbjct: 122056 ttggttttctatatctcctc 122075
>emb|AL035688.8|HS173A13 Human DNA sequence from clone RP1-173A13 on chromosome 6 Contains a proteasome component C9 (macropain subunit C9) (PSMA4) pseudogene, complete sequence Length = 148870 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 ttggttttctatatctcctc 217 |||||||||||||||||||| Sbjct: 12335 ttggttttctatatctcctc 12316
>emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chromosome 13 Contains part of a novel gene, complete sequence Length = 150986 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 aggccatgcaagcaccagcc 274 |||||||||||||||||||| Sbjct: 86115 aggccatgcaagcaccagcc 86134
>emb|AL645476.26| Mouse DNA sequence from clone RP23-70L6 on chromosome 11 Contains a CpG island, complete sequence Length = 143728 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 atcactctacagttatctgt 181 |||||||||||||||||||| Sbjct: 118473 atcactctacagttatctgt 118492
>dbj|AK075420.1| Homo sapiens cDNA PSEC0111 fis, clone NT2RP2006028, moderately similar to Pro-oncosis receptor inducing membrane injury gene Length = 3362 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cagccatggcggcatctgca 293 |||||||||||||||||||| Sbjct: 294 cagccatggcggcatctgca 313
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 tgccatgtgcatttctttcaaatagaaa 137 ||||| ||||||||||||||||| |||| Sbjct: 7252266 tgccaagtgcatttctttcaaattgaaa 7252239
>gb|AY157580.1| Homo sapiens keratinocytes associated transmembrane protein 3 (KCT3) mRNA, complete cds Length = 967 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cagccatggcggcatctgca 293 |||||||||||||||||||| Sbjct: 205 cagccatggcggcatctgca 224
>gb|AC013482.2|AC013482 Genomic sequence for Arabidopsis thaliana BAC T26F17 from chromosome I, complete sequence Length = 82875 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ttacaaacagatgccatgtg 118 |||||||||||||||||||| Sbjct: 44336 ttacaaacagatgccatgtg 44355
>dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031J07 Length = 172511 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 tgccatgtgcatttctttcaaatagaaa 137 ||||| ||||||||||||||||| |||| Sbjct: 11579 tgccaagtgcatttctttcaaattgaaa 11552
>gb|AC005895.1|AC005895 Homo sapiens chromosome 5, Bac clone 5m9 (LBNL H220), complete sequence Length = 87857 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gttgctttatttataaagtggggc 35 ||||| |||||||||||||||||| Sbjct: 60368 gttgccttatttataaagtggggc 60345
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 tgccatgtgcatttctttcaaatagaaa 137 ||||| ||||||||||||||||| |||| Sbjct: 7252145 tgccaagtgcatttctttcaaattgaaa 7252118
>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121243 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 110 tgccatgtgcatttctttcaaatagaaa 137 ||||| ||||||||||||||||| |||| Sbjct: 3832 tgccaagtgcatttctttcaaattgaaa 3859
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 tgccatgtgcatttctttcaaatagaaa 137 ||||| ||||||||||||||||| |||| Sbjct: 108579 tgccaagtgcatttctttcaaattgaaa 108552 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,734,020 Number of Sequences: 3902068 Number of extensions: 3734020 Number of successful extensions: 75893 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75718 Number of HSP's gapped (non-prelim): 170 length of query: 406 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 384 effective length of database: 17,147,199,772 effective search space: 6584524712448 effective search space used: 6584524712448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)