ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_464303.1| Oryza sativa (japonica cultivar-group), mRNA 230 3e-57
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 230 3e-57
3dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic D... 230 3e-57
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
5dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
6gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33... 64 4e-07
7emb|AJ512821.1|TAE512821 Triticum aestivum stB1.1a gene for sulp... 60 6e-06
8gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete se... 54 4e-04
9gb|DQ135974.1| Triticum aestivum clone wmc(20g4) anchored-SSR pr... 52 0.001
10gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14... 48 0.022
11gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial c... 48 0.022
12gb|DQ469713.1| Hordeum vulgare subsp. vulgare serine/threonine k... 48 0.022
13gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete se... 46 0.088
14gb|AF166121.1|AF166121 Hordeum vulgare Cf2/Cf5 disease resistanc... 44 0.35
15emb|BX005058.3| Zebrafish DNA sequence from clone CH211-112K3 in... 44 0.35
16gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
17gb|AC119806.6| Mus musculus chromosome 7, clone RP23-211A9, comp... 42 1.4
18dbj|AK086324.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 42 1.4
19dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
20gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome... 42 1.4
21gb|AC140269.3| Mus musculus BAC clone RP23-322I5 from chromosome... 40 5.4
22gb|AY358696.1| Homo sapiens clone DNA66309 serine/threonine-rich... 40 5.4
23gb|AC134909.4| Mus musculus chromosome 3 clone RP23-402O2, compl... 40 5.4
24gb|BC032296.1| Homo sapiens transmembrane protein 123, mRNA (cDN... 40 5.4
25emb|AL356131.12| Human DNA sequence from clone RP1-91N13 on chro... 40 5.4
26emb|AL035688.8|HS173A13 Human DNA sequence from clone RP1-173A13... 40 5.4
27emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chr... 40 5.4
28emb|AL645476.26| Mouse DNA sequence from clone RP23-70L6 on chro... 40 5.4
29dbj|AK075420.1| Homo sapiens cDNA PSEC0111 fis, clone NT2RP20060... 40 5.4
30dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
31gb|AY157580.1| Homo sapiens keratinocytes associated transmembra... 40 5.4
32gb|AC013482.2|AC013482 Genomic sequence for Arabidopsis thaliana... 40 5.4
33dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
34gb|AC005895.1|AC005895 Homo sapiens chromosome 5, Bac clone 5m9 ... 40 5.4
35gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
36emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.4
37emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.4

>ref|XM_464303.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3039

 Score =  230 bits (116), Expect = 3e-57
 Identities = 209/240 (87%)
 Strand = Plus / Minus

                                                                        
Query: 163  tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222
            ||||||||||||||| ||||| | ||| || |||||||||||||| ||||||||||    
Sbjct: 3039 tcactctacagttatttgtaacagggttgtgagccttggttttctgtatctcctcaacca 2980

                                                                        
Query: 223  cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282
            ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 2979 cagagaggaacatactacactaacagatgagaacgccatgcaagcaccagccagccaagg 2920

                                                                        
Query: 283  cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggcaacgat 342
             ||||| || |||||| |||  ||||||||||| || ||||| || ||||| || | |||
Sbjct: 2919 tggcatttggaggccggtgaatgggaagagtgctccagcagcaaccgggatagcgatgat 2860

                                                                        
Query: 343  gttataagccatggcaaagaagtagttccaccggattcggctgaatgtcttccttgagag 402
            ||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 2859 gttgtacgccatggcaaagaagtagttccatcggattcggctgaacgtcttccttgagag 2800



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  230 bits (116), Expect = 3e-57
 Identities = 209/240 (87%)
 Strand = Plus / Plus

                                                                           
Query: 163     tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222
               ||||||||||||||| ||||| | ||| || |||||||||||||| ||||||||||    
Sbjct: 3950585 tcactctacagttatttgtaacagggttgtgagccttggttttctgtatctcctcaacca 3950644

                                                                           
Query: 223     cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282
               ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 3950645 cagagaggaacatactacactaacagatgagaacgccatgcaagcaccagccagccaagg 3950704

                                                                           
Query: 283     cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggcaacgat 342
                ||||| || |||||| |||  ||||||||||| || ||||| || ||||| || | |||
Sbjct: 3950705 tggcatttggaggccggtgaatgggaagagtgctccagcagcaaccgggatagcgatgat 3950764

                                                                           
Query: 343     gttataagccatggcaaagaagtagttccaccggattcggctgaatgtcttccttgagag 402
               ||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 3950765 gttgtacgccatggcaaagaagtagttccatcggattcggctgaacgtcttccttgagag 3950824



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>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0030G02
          Length = 187265

 Score =  230 bits (116), Expect = 3e-57
 Identities = 209/240 (87%)
 Strand = Plus / Plus

                                                                          
Query: 163    tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222
              ||||||||||||||| ||||| | ||| || |||||||||||||| ||||||||||    
Sbjct: 149056 tcactctacagttatttgtaacagggttgtgagccttggttttctgtatctcctcaacca 149115

                                                                          
Query: 223    cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282
              ||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 149116 cagagaggaacatactacactaacagatgagaacgccatgcaagcaccagccagccaagg 149175

                                                                          
Query: 283    cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggcaacgat 342
               ||||| || |||||| |||  ||||||||||| || ||||| || ||||| || | |||
Sbjct: 149176 tggcatttggaggccggtgaatgggaagagtgctccagcagcaaccgggatagcgatgat 149235

                                                                          
Query: 343    gttataagccatggcaaagaagtagttccaccggattcggctgaatgtcttccttgagag 402
              ||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 149236 gttgtacgccatggcaaagaagtagttccatcggattcggctgaacgtcttccttgagag 149295



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  139 bits (70), Expect = 8e-30
 Identities = 193/234 (82%)
 Strand = Plus / Plus

                                                                            
Query: 163      tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222
                |||||||||||||||||| || |||||||| ||||||||||| || || || ||||  | 
Sbjct: 27133869 tcactctacagttatctgcaacacggtggtcagccttggtttcctgtaccttctcaacaa 27133928

                                                                            
Query: 223      cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282
                ||||||||| || || || || || || ||||| |||||||| || || || ||||| ||
Sbjct: 27133929 cagcgaggagcacaccacgctgacggaggagaacgccatgcaggcgccggcgagccacgg 27133988

                                                                            
Query: 283      cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggcaacgat 342
                |||||||||||| |   ||| |||||| || |||||||| || || |||||||| || | 
Sbjct: 27133989 cggcatctgcagcctcgtgaaggggaacagcgcgccggcggcgaccgggatggcgaccac 27134048

                                                                      
Query: 343      gttataagccatggcaaagaagtagttccaccggattcggctgaatgtcttcct 396
                ||| || |||||||| |||||||||||||||||||| |||||||| ||||||||
Sbjct: 27134049 gttgtacgccatggcgaagaagtagttccaccggatccggctgaacgtcttcct 27134102



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 140/174 (80%)
 Strand = Plus / Plus

                                                                            
Query: 163      tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222
                |||||||||||||||||| || | ||| || |||||||||||||| ||||| ||||  | 
Sbjct: 27130822 tcactctacagttatctgcaacatggtcgtcagccttggttttctgtatcttctcaacaa 27130881

                                                                            
Query: 223      cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282
                ||||||||| || || || |  || || ||||| |||||||| || || || ||||| ||
Sbjct: 27130882 cagcgaggagcacaccacgccgacggaggagaacgccatgcaggcgccggcgagccacgg 27130941

                                                                      
Query: 283      cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggc 336
                |||||||||||| |   ||| |||||| || |||||||| || || ||||||||
Sbjct: 27130942 cggcatctgcagcctcgtgaaggggaacagcgcgccggcggcgaccgggatggc 27130995



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 110      tgccatgtgcatttctttcaaatagaaa 137
                ||||| ||||||||||||||||| ||||
Sbjct: 13894359 tgccaagtgcatttctttcaaattgaaa 13894332



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>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0473H04
          Length = 155204

 Score =  139 bits (70), Expect = 8e-30
 Identities = 193/234 (82%)
 Strand = Plus / Plus

                                                                          
Query: 163    tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222
              |||||||||||||||||| || |||||||| ||||||||||| || || || ||||  | 
Sbjct: 102679 tcactctacagttatctgcaacacggtggtcagccttggtttcctgtaccttctcaacaa 102738

                                                                          
Query: 223    cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282
              ||||||||| || || || || || || ||||| |||||||| || || || ||||| ||
Sbjct: 102739 cagcgaggagcacaccacgctgacggaggagaacgccatgcaggcgccggcgagccacgg 102798

                                                                          
Query: 283    cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggcaacgat 342
              |||||||||||| |   ||| |||||| || |||||||| || || |||||||| || | 
Sbjct: 102799 cggcatctgcagcctcgtgaaggggaacagcgcgccggcggcgaccgggatggcgaccac 102858

                                                                    
Query: 343    gttataagccatggcaaagaagtagttccaccggattcggctgaatgtcttcct 396
              ||| || |||||||| |||||||||||||||||||| |||||||| ||||||||
Sbjct: 102859 gttgtacgccatggcgaagaagtagttccaccggatccggctgaacgtcttcct 102912



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 140/174 (80%)
 Strand = Plus / Plus

                                                                         
Query: 163   tcactctacagttatctgtaagacggtggtaagccttggttttctatatctcctcagtag 222
             |||||||||||||||||| || | ||| || |||||||||||||| ||||| ||||  | 
Sbjct: 99632 tcactctacagttatctgcaacatggtcgtcagccttggttttctgtatcttctcaacaa 99691

                                                                         
Query: 223   cagcgaggaacatactacactaacagacgagaaggccatgcaagcaccagccagccatgg 282
             ||||||||| || || || |  || || ||||| |||||||| || || || ||||| ||
Sbjct: 99692 cagcgaggagcacaccacgccgacggaggagaacgccatgcaggcgccggcgagccacgg 99751

                                                                   
Query: 283   cggcatctgcaggccgatgagggggaagagtgcgccggcagccacggggatggc 336
             |||||||||||| |   ||| |||||| || |||||||| || || ||||||||
Sbjct: 99752 cggcatctgcagcctcgtgaaggggaacagcgcgccggcggcgaccgggatggc 99805



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>gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33 (Tak33) genes, complete cds
          Length = 20754

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 13    ttgctttatttataaagtggggcgaaagcctttttgggta 52
             ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 17259 ttgctttatttataaagcggggcgaaagcctttttcggta 17298



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>emb|AJ512821.1|TAE512821 Triticum aestivum stB1.1a gene for sulphate transporter, exons
           1-14, genome B
          Length = 4071

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 17  tttatttataaagtggggcgaaagcctttttgggtata 54
           ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 324 tttatttataaagcggggcgaaagcctttttcggtata 287



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>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence
          Length = 285444

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 13     ttgctttatttataaagtggggcgaaagccttttt 47
              |||||||||||||||||  ||||||||||||||||
Sbjct: 113309 ttgctttatttataaagcagggcgaaagccttttt 113275



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>gb|DQ135974.1| Triticum aestivum clone wmc(20g4) anchored-SSR primer sequence
          Length = 374

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                            
Query: 13 ttgctttatttataaagtggggcgaaagcctttt 46
          ||||||||||||||||| ||| ||||||||||||
Sbjct: 46 ttgctttatttataaagcgggtcgaaagcctttt 13



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>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 12    gttgctttatttataaagtggggcgaaagccttttt 47
             |||||||||| ||||||| ||| |||||||||||||
Sbjct: 19078 gttgctttatatataaagcgggacgaaagccttttt 19043



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>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative
             chromosome condensation factor (CCF), putative resistance
             protein (RGA-2), putative resistance protein (RGA2) and
             putative nodulin-like-like protein (NLL) gene, complete
             cds; and retrotransposons Josephine, Angela-2, Angela-4,
             Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6,
             Angela-5, Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 12    gttgctttatttataaagtggggcgaaagccttttt 47
             ||||||||||  |||||| |||||||||||||||||
Sbjct: 13456 gttgctttatacataaagcggggcgaaagccttttt 13421



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>gb|DQ469713.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein
             ABC1040 gene, complete cds
          Length = 21799

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 12    gttgctttatttataaagtggggcgaaa 39
             |||||||||| |||||||||||||||||
Sbjct: 13040 gttgctttatatataaagtggggcgaaa 13013



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>gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete sequence
          Length = 137052

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 257  gccatgcaagcaccagccagccatggcggca 287
            ||||||||||||||||| |||||||| ||||
Sbjct: 9522 gccatgcaagcaccagcaagccatggtggca 9552



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>gb|AF166121.1|AF166121 Hordeum vulgare Cf2/Cf5 disease resistance protein homolog (Big1)
            gene, complete cds
          Length = 7351

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 14   tgctttatttataaagtggggcgaaagcct 43
            |||||||| ||||||| |||||||||||||
Sbjct: 6336 tgctttatctataaagcggggcgaaagcct 6307



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>emb|BX005058.3| Zebrafish DNA sequence from clone CH211-112K3 in linkage group 17,
              complete sequence
          Length = 170139

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 346    ataagccatggcaaagaagtag 367
              ||||||||||||||||||||||
Sbjct: 108282 ataagccatggcaaagaagtag 108303



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>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035I01, complete sequence
          Length = 147813

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 109   atgccatgtgcatttctttcaaatagaaa 137
             |||||| ||||||||||||||||| ||||
Sbjct: 53892 atgccaagtgcatttctttcaaattgaaa 53864



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>gb|AC119806.6| Mus musculus chromosome 7, clone RP23-211A9, complete sequence
          Length = 215147

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 91   tcacttgattacaaacagatg 111
            |||||||||||||||||||||
Sbjct: 4270 tcacttgattacaaacagatg 4250



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>dbj|AK086324.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:D930021H04 product:unclassifiable, full
            insert sequence
          Length = 1798

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 91   tcacttgattacaaacagatg 111
            |||||||||||||||||||||
Sbjct: 1311 tcacttgattacaaacagatg 1291



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 109      atgccatgtgcatttctttcaaatagaaa 137
                |||||| ||||||||||||||||| ||||
Sbjct: 29569390 atgccaagtgcatttctttcaaattgaaa 29569362



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>gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome 7, complete sequence
          Length = 226264

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    tcacttgattacaaacagatg 111
             |||||||||||||||||||||
Sbjct: 65193 tcacttgattacaaacagatg 65213



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>gb|AC140269.3| Mus musculus BAC clone RP23-322I5 from chromosome 3, complete sequence
          Length = 205887

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     ttttgggtatatgctattta 63
              ||||||||||||||||||||
Sbjct: 171211 ttttgggtatatgctattta 171192



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>gb|AY358696.1| Homo sapiens clone DNA66309 serine/threonine-rich receptor (UNQ641)
           mRNA, complete cds
          Length = 1281

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 cagccatggcggcatctgca 293
           ||||||||||||||||||||
Sbjct: 182 cagccatggcggcatctgca 201



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>gb|AC134909.4| Mus musculus chromosome 3 clone RP23-402O2, complete sequence
          Length = 183831

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     ttttgggtatatgctattta 63
              ||||||||||||||||||||
Sbjct: 177568 ttttgggtatatgctattta 177587



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>gb|BC032296.1| Homo sapiens transmembrane protein 123, mRNA (cDNA clone MGC:40439
           IMAGE:4340763), complete cds
          Length = 3282

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 cagccatggcggcatctgca 293
           ||||||||||||||||||||
Sbjct: 197 cagccatggcggcatctgca 216



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>emb|AL356131.12| Human DNA sequence from clone RP1-91N13 on chromosome 6 Contains a
              proteasome subunit alpha type 4 (PROS29) pseudogene,
              complete sequence
          Length = 170095

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    ttggttttctatatctcctc 217
              ||||||||||||||||||||
Sbjct: 122056 ttggttttctatatctcctc 122075



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>emb|AL035688.8|HS173A13 Human DNA sequence from clone RP1-173A13 on chromosome 6 Contains a
             proteasome component C9 (macropain subunit C9) (PSMA4)
             pseudogene, complete sequence
          Length = 148870

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ttggttttctatatctcctc 217
             ||||||||||||||||||||
Sbjct: 12335 ttggttttctatatctcctc 12316



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>emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chromosome 13 Contains
             part of a novel gene, complete sequence
          Length = 150986

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   aggccatgcaagcaccagcc 274
             ||||||||||||||||||||
Sbjct: 86115 aggccatgcaagcaccagcc 86134



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>emb|AL645476.26| Mouse DNA sequence from clone RP23-70L6 on chromosome 11 Contains a CpG
              island, complete sequence
          Length = 143728

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    atcactctacagttatctgt 181
              ||||||||||||||||||||
Sbjct: 118473 atcactctacagttatctgt 118492



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>dbj|AK075420.1| Homo sapiens cDNA PSEC0111 fis, clone NT2RP2006028, moderately
           similar to Pro-oncosis receptor inducing membrane injury
           gene
          Length = 3362

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 cagccatggcggcatctgca 293
           ||||||||||||||||||||
Sbjct: 294 cagccatggcggcatctgca 313



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 110     tgccatgtgcatttctttcaaatagaaa 137
               ||||| ||||||||||||||||| ||||
Sbjct: 7252266 tgccaagtgcatttctttcaaattgaaa 7252239



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>gb|AY157580.1| Homo sapiens keratinocytes associated transmembrane protein 3
           (KCT3) mRNA, complete cds
          Length = 967

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 cagccatggcggcatctgca 293
           ||||||||||||||||||||
Sbjct: 205 cagccatggcggcatctgca 224



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>gb|AC013482.2|AC013482 Genomic sequence for Arabidopsis thaliana BAC T26F17 from chromosome I,
             complete sequence
          Length = 82875

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    ttacaaacagatgccatgtg 118
             ||||||||||||||||||||
Sbjct: 44336 ttacaaacagatgccatgtg 44355



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>dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031J07
          Length = 172511

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 110   tgccatgtgcatttctttcaaatagaaa 137
             ||||| ||||||||||||||||| ||||
Sbjct: 11579 tgccaagtgcatttctttcaaattgaaa 11552



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>gb|AC005895.1|AC005895 Homo sapiens chromosome 5, Bac clone 5m9 (LBNL H220), complete sequence
          Length = 87857

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    gttgctttatttataaagtggggc 35
             ||||| ||||||||||||||||||
Sbjct: 60368 gttgccttatttataaagtggggc 60345



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 110     tgccatgtgcatttctttcaaatagaaa 137
               ||||| ||||||||||||||||| ||||
Sbjct: 7252145 tgccaagtgcatttctttcaaattgaaa 7252118



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>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 121243

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 110  tgccatgtgcatttctttcaaatagaaa 137
            ||||| ||||||||||||||||| ||||
Sbjct: 3832 tgccaagtgcatttctttcaaattgaaa 3859



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>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 141427

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 110    tgccatgtgcatttctttcaaatagaaa 137
              ||||| ||||||||||||||||| ||||
Sbjct: 108579 tgccaagtgcatttctttcaaattgaaa 108552


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,734,020
Number of Sequences: 3902068
Number of extensions: 3734020
Number of successful extensions: 75893
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75718
Number of HSP's gapped (non-prelim): 170
length of query: 406
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 384
effective length of database: 17,147,199,772
effective search space: 6584524712448
effective search space used: 6584524712448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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