>REC8L_HUMAN (O95072) Meiotic recombination protein REC8-like 1 (Cohesin Rec8p)|
          Length = 547

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +1

Query: 277 SPEKEPRVTAAPRRELAKRLLFWD 348
           SPE+ P V   PRR   +RLLFWD
Sbjct: 286 SPERRPPVPPPPRRRRRRRLLFWD 309

>ZYX_CHICK (Q04584) Zyxin|
          Length = 542

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 141 LPSPSPTSGDYSHMWEKPWKDDGLVMVMTMAAISPLRRPKQPP 269
           L  P P +  Y+  WE+P   +  V     AA+  +RRP   P
Sbjct: 270 LSRPQPPNFTYAQQWERPQVQEKPVPTEKSAAVKDMRRPTADP 312

>CY550_ODOSI (P49510) Cytochrome c-550 precursor (Cytochrome c550)|
          Length = 163

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 250 RRGEIAAIVITITNPSSFHGFSHMCE*SPDVGEGD 146
           RR   AA+V  + NP+S+ G   + E  P +  GD
Sbjct: 91  RRDNAAALVDYLKNPTSYDGLESIAEIHPSIKSGD 125

>NPBL_MOUSE (Q6KCD5) Nipped-B-like protein (Delangin homolog) (SCC2 homolog)|
          Length = 2798

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 159 TSGDYSHMWEKPWKDDGLVMVMTMAAISPLRRPK 260
           +S DY HM  +   DDG    M  AA  PLR P+
Sbjct: 243 SSDDYLHMVHRLSSDDGDSSTMRNAASFPLRSPQ 276

>SERC_YEAST (P33330) Phosphoserine aminotransferase (EC 2.6.1.52) (PSAT)|
          Length = 395

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 104 SDELLHDLTHPISPIPFTY 160
           SDE LH+L  PI+PI F Y
Sbjct: 242 SDETLHELGVPITPIAFDY 260

>RL5_PYRFU (Q8U012) 50S ribosomal protein L5P|
          Length = 186

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = -1

Query: 352 RNPRTEVVLQVLDVEPPSPSVLFRES*SGGCFGLRRGEIAAIVITITNPSSF 197
           R  + E++LQ L  + P   +  +   +   FG+RRGE  A+ +T+  P ++
Sbjct: 40  RLTKAEIMLQQLTGQKP---IRRKAKKTNRDFGIRRGEPIAVKVTLRGPKAY 88

>FDHD_PHOLL (Q7MY11) Protein fdhD homolog|
          Length = 276

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 38  RVISSSKDDKHHTRG*ATCPQKSDELLHDLTHPISPIPFT 157
           R  +  K+ + +  G   C     E L D+  PISP+PFT
Sbjct: 104 RRFAGLKERRRNLAGRTGCGICGAEQLSDIFRPISPLPFT 143

>CDC5_YEAST (P32562) Cell cycle serine/threonine-protein kinase CDC5/MSD2 (EC|
           2.7.11.21)
          Length = 705

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +3

Query: 168 DYSHMWEKPWKDDGLVMVMTMAAISPLRRP 257
           D+S   +KP  D+G +++  + ++ P+ RP
Sbjct: 297 DFSFPRDKPISDEGKILIRDILSLDPIERP 326

>NIPBL_HUMAN (Q6KC79) Nipped-B-like protein (Delangin) (SCC2 homolog)|
          Length = 2804

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 159 TSGDYSHMWEKPWKDDGLVMVMTMAAISPLRRPK 260
           +S DY HM  +   DDG    M  AA  PLR P+
Sbjct: 243 SSEDYLHMVHRLSSDDGDSSTMRNAASFPLRSPQ 276

>RL5_PYRHO (O59431) 50S ribosomal protein L5P|
          Length = 188

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = -1

Query: 352 RNPRTEVVLQVLDVEPPSPSVLFRES*SGGCFGLRRGEIAAIVITITNPSSF 197
           R  + E++LQ L  + P   +  +   +   FG+RRGE  A+ +T+  P ++
Sbjct: 40  RLTKAEIMLQRLTGQKP---IRRKAKKTNRDFGIRRGEPIAVKVTLRGPKAY 88

>VG29_HAEIN (P44225) Mu-like prophage FluMu protein gp29|
          Length = 520

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = -2

Query: 378 LAPIFTRDTEIPEQKSFCKFSTWSRRHPRFFFGRANLEAVLASGEG 241
           LA   TRD   P     CK    +RR PRF F  A  E + A  +G
Sbjct: 341 LAATLTRDLVYPLYALNCKSFNDARRIPRFEFDVAESEDLNAFADG 386

>CY550_SPIMA (P82603) Cytochrome c-550 (Cytochrome c550) (Cytochrome c-549)|
           (Cytochrome c549)
          Length = 129

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 247 RGEIAAIVITITNPSSFHGFSHMCE*SPDVGEGD 146
           R  IAA+V  I NP+++ GF  + E  P +   D
Sbjct: 64  RDNIAALVDYIKNPTTYDGFVEISELHPSLKSSD 97

>SKI2_YEAST (P35207) Antiviral helicase SKI2 (EC 3.6.1.-)|
          Length = 1287

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +3

Query: 57  KMINTILEDRQHAPKNLMNYYMI*LIQSLP---SPSPTSG--DYSHMWEKP 194
           K  N I++DR   P N + + ++ ++Q +P   SP   SG  DY  + + P
Sbjct: 45  KHANDIIKDRFLRPSNALPWSLLDMVQDVPHTSSPEDCSGKLDYKELLKVP 95


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,904,173
Number of Sequences: 219361
Number of extensions: 1135680
Number of successful extensions: 2297
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2297
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)