ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible l... 523 e-145
2emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2... 98 3e-17
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
5emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 86 1e-13
6emb|AJ270938.1|OSA270938 Oryza sativa mRNA for lipoxygenase (rci... 78 3e-11
7dbj|AK072241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-11
8dbj|AK066737.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-11
9emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 78 3e-11
10ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
11ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
12gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 54 4e-04
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 4e-04
14emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2... 54 4e-04
15gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 54 4e-04
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
17dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
18dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
19dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
20dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
21gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 52 0.002
22gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 52 0.002
23gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 52 0.002
24gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 52 0.002
25gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 50 0.006
26gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 50 0.006
27gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
28ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.024
29gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 48 0.024
30emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 48 0.024
31gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 48 0.024
32gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 48 0.024
33dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.024
34gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 48 0.024
35gb|AY103567.1| Zea mays PCO116252 mRNA sequence 48 0.024
36gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partia... 48 0.024
37gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 48 0.024
38ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.37
39dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
40dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
41dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
42dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
43ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
44gb|AC104785.5| Homo sapiens BAC clone RP11-84C13 from 4, complet... 42 1.5
45gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 42 1.5
46gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 42 1.5
47dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.5
48dbj|AP001614.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 42 1.5
49ref|XM_524799.1| PREDICTED: Pan troglodytes similar to potassium... 40 5.8
50ref|NM_005549.2| Homo sapiens potassium voltage-gated channel, s... 40 5.8
51gb|BC074990.2| Homo sapiens potassium voltage-gated channel, sha... 40 5.8
52gb|AC132405.3| Mus musculus BAC clone RP23-332I1 from chromosome... 40 5.8
53ref|XM_582224.2| PREDICTED: Bos taurus similar to potassium volt... 40 5.8
54ref|XM_983966.1| PREDICTED: Mus musculus potassium voltage-gated... 40 5.8
55ref|XM_143471.4| PREDICTED: Mus musculus potassium voltage-gated... 40 5.8
56emb|CR354437.13| Zebrafish DNA sequence from clone DKEY-11D10 in... 40 5.8
57ref|XM_854998.1| PREDICTED: Canis familiaris similar to Signal t... 40 5.8
58ref|XM_854961.1| PREDICTED: Canis familiaris similar to Signal t... 40 5.8
59ref|XM_854922.1| PREDICTED: Canis familiaris similar to Signal t... 40 5.8
60ref|XM_548092.2| PREDICTED: Canis familiaris similar to Signal t... 40 5.8
61ref|XM_854847.1| PREDICTED: Canis familiaris similar to Signal t... 40 5.8
62ref|XM_854813.1| PREDICTED: Canis familiaris similar to Signal t... 40 5.8
63ref|XM_854777.1| PREDICTED: Canis familiaris similar to Signal t... 40 5.8
64ref|XM_854742.1| PREDICTED: Canis familiaris similar to Signal t... 40 5.8
65ref|XM_854710.1| PREDICTED: Canis familiaris similar to Signal t... 40 5.8
66ref|XM_854676.1| PREDICTED: Canis familiaris similar to Signal t... 40 5.8
67ref|XM_548091.2| PREDICTED: Canis familiaris similar to Signal t... 40 5.8
68ref|XM_547232.2| PREDICTED: Canis familiaris similar to potassiu... 40 5.8
69ref|XM_946728.1| Theileria annulata strain Ankara hypothetical p... 40 5.8
70gb|AC159626.2| Mus musculus BAC clone RP24-209A23 from chromosom... 40 5.8
71emb|AL512592.14| Human DNA sequence from clone RP11-35D6 on chro... 40 5.8
72emb|AL358215.16| Human DNA sequence from clone RP11-470L19 on ch... 40 5.8
73gb|BC077139.1| Danio rerio wu:fc51g12, mRNA (cDNA clone IMAGE:71... 40 5.8
74gb|BC069165.1| Homo sapiens cDNA clone IMAGE:7216995 40 5.8
75gb|AC010012.5| Drosophila melanogaster 3L BAC RP98-22J16 (Roswel... 40 5.8
76dbj|AK157965.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 40 5.8
77ref|XM_688015.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 5.8
78emb|BX324196.4| Zebrafish DNA sequence from clone CH211-142A12 i... 40 5.8
79ref|XM_227577.3| PREDICTED: Rattus norvegicus potassium voltage-... 40 5.8
80gb|AY110522.1| Zea mays CL4677_2 mRNA sequence 40 5.8
81gb|AY104322.1| Zea mays PCO093659 mRNA sequence 40 5.8
82gb|AE003474.4| Drosophila melanogaster chromosome 3L, section 8 ... 40 5.8
83gb|U96110.1|HSU96110 Homo sapiens cyclic GMP gated potassium cha... 40 5.8
84gb|U38182.1|OCU38182 Oryctolagus cuniculus cGMP-gated potassium ... 40 5.8 
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA,
            complete cds
          Length = 3054

 Score =  523 bits (264), Expect = e-145
 Identities = 281/284 (98%), Gaps = 2/284 (0%)
 Strand = Plus / Minus

                                                                        
Query: 153  cgtccgtgggatcaccgtccgacggcctgagcagcacatacggcaccatgccggcgccgt 212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2854 cgtccgtgggatcaccgtccgacggcctgagcagcacatacggcaccatgccggcgccgt 2795

                                                                        
Query: 213  gtcggtttttccggtcggggtcgttgttccactcatccacctgctccacgatcttccagg 272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2794 gtcggtttttccggtcggggtcgttgttccactcatccacctgctccacgatcttcctgg 2735

                                                                        
Query: 273  tgctctccttgaactcctcaaatgcctggttgatcaccccatcctttgtccatgccggct 332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2734 tgctctccttgaactcctcaaatgcctggttgatcaccccatcctttgtccatgccggct 2675

                                                                        
Query: 333  cttcgtgcgtgcccatgtactcctcatccgacgagtgcgtggacaagaggtccaaagatg 392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2674 cttcgtgcgtgcccatgtactcctcatccgacgagtgcgtggacaagaggtcc-aagatg 2616

                                                        
Query: 393  gc-aggactatggcactctggtactgggacgggaacgtgtccag 435
            || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2615 gcaaggactatggcactctggtactgggacgggaacgtgtccag 2572



 Score =  165 bits (83), Expect = 1e-37
 Identities = 83/83 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    aattataatttggtgctcattcccattatacccaccgccgggccaagagactgaagacac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3021 aattataatttggtgctcattcccattatacccaccgccgggccaagagactgaagacac 2962

                                   
Query: 61   tcttatttacgcctagttgagtt 83
            |||||||||||||||||||||||
Sbjct: 2961 tcttatttacgcctagttgagtt 2939



 Score =  149 bits (75), Expect = 9e-33
 Identities = 75/75 (100%)
 Strand = Plus / Minus

                                                                        
Query: 99   aggcagctcaaatggagatgctgttggggatgcccatctccatcaccatcttctcgtccg 158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2923 aggcagctcaaatggagatgctgttggggatgcccatctccatcaccatcttctcgtccg 2864

                           
Query: 159  tgggatcaccgtccg 173
            |||||||||||||||
Sbjct: 2863 tgggatcaccgtccg 2849
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>emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:2 gene)
          Length = 3023

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                        
Query: 108  aaatggagatgctgttggggatgcccatctccatcaccatcttctcgtccgtgggatcac 167
            ||||||| |||||||| || |||||||||||||||||| | ||  ||||| | |||| ||
Sbjct: 2892 aaatggaaatgctgttcggaatgcccatctccatcaccgttttagcgtccatcggattac 2833

                                                                        
Query: 168  cgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtttttccggt 227
            ||| | | |||||||||||||| |||||||| | |||||| ||||| |||||| ||||| 
Sbjct: 2832 cgttcaatggcctgagcagcacgtacggcactacgccggcaccgtggcggtttctccggc 2773

                                                 
Query: 228  cggggtcgttgttccactcatccacctgctccacgat 264
             |  ||| ||||||||||| || ||||||||| ||||
Sbjct: 2772 tgtcgtccttgttccactcttcgacctgctccgcgat 2736



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 309  ccccatcctttgtccatgccggctcttcgtgcgtgcccatgtactcctcatccgacgagt 368
            |||||||| ||  ||| |||||||| | ||||||||||||||||||||| ||||||| ||
Sbjct: 2691 ccccatccctttgccaagccggctcctggtgcgtgcccatgtactcctcgtccgacgcgt 2632

               
Query: 369  gcg 371
            |||
Sbjct: 2631 gcg 2629
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 43/43 (100%)
 Strand = Plus / Minus

                                                           
Query: 103      agctcaaatggagatgctgttggggatgcccatctccatcacc 145
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22970463 agctcaaatggagatgctgttggggatgcccatctccatcacc 22970421



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Plus

                                                                            
Query: 105      ctcaaatggagatgctgttggggatgcccatctccatcaccatcttctcgtccgtgggat 164
                ||||||| ||||||||||||||||| ||||||||||||||   | ||  |||| | || |
Sbjct: 22888635 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 22888694

                                                                       
Query: 165      caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 219
                ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 22888695 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 22888749



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 408      tctggtactgggacgggaacgtgtccag 435
                |||||||||| |||||||||||||||||
Sbjct: 22970158 tctggtactgcgacgggaacgtgtccag 22970131



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 337      gtgcgtgcccatgtactcctc 357
                |||||||||||||||||||||
Sbjct: 22970229 gtgcgtgcccatgtactcctc 22970209



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 338      tgcgtgcccatgtactcctc 357
                ||||||||||||||||||||
Sbjct: 22888868 tgcgtgcccatgtactcctc 22888887
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 43/43 (100%)
 Strand = Plus / Minus

                                                           
Query: 103      agctcaaatggagatgctgttggggatgcccatctccatcacc 145
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22898654 agctcaaatggagatgctgttggggatgcccatctccatcacc 22898612



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Plus

                                                                            
Query: 105      ctcaaatggagatgctgttggggatgcccatctccatcaccatcttctcgtccgtgggat 164
                ||||||| ||||||||||||||||| ||||||||||||||   | ||  |||| | || |
Sbjct: 22816826 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 22816885

                                                                       
Query: 165      caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 219
                ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 22816886 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 22816940



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 408      tctggtactgggacgggaacgtgtccag 435
                |||||||||| |||||||||||||||||
Sbjct: 22898349 tctggtactgcgacgggaacgtgtccag 22898322



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 337      gtgcgtgcccatgtactcctc 357
                |||||||||||||||||||||
Sbjct: 22898420 gtgcgtgcccatgtactcctc 22898400



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 338      tgcgtgcccatgtactcctc 357
                ||||||||||||||||||||
Sbjct: 22817059 tgcgtgcccatgtactcctc 22817078
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>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 43/43 (100%)
 Strand = Plus / Minus

                                                        
Query: 103   agctcaaatggagatgctgttggggatgcccatctccatcacc 145
             |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79740 agctcaaatggagatgctgttggggatgcccatctccatcacc 79698



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 408   tctggtactgggacgggaacgtgtccag 435
             |||||||||| |||||||||||||||||
Sbjct: 79435 tctggtactgcgacgggaacgtgtccag 79408



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 337   gtgcgtgcccatgtactcctc 357
             |||||||||||||||||||||
Sbjct: 79506 gtgcgtgcccatgtactcctc 79486
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>emb|AJ270938.1|OSA270938 Oryza sativa mRNA for lipoxygenase (rci-1 gene)
          Length = 3018

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                        
Query: 105  ctcaaatggagatgctgttggggatgcccatctccatcaccatcttctcgtccgtgggat 164
            ||||||| ||||||||||||||||| ||||||||||||||   | ||  |||| | || |
Sbjct: 2817 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2758

                                                                   
Query: 165  caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 219
            ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 2757 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2703



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  tgcgtgcccatgtactcctc 357
            ||||||||||||||||||||
Sbjct: 2584 tgcgtgcccatgtactcctc 2565
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>dbj|AK072241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002P20, full
            insert sequence
          Length = 3080

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                        
Query: 105  ctcaaatggagatgctgttggggatgcccatctccatcaccatcttctcgtccgtgggat 164
            ||||||| ||||||||||||||||| ||||||||||||||   | ||  |||| | || |
Sbjct: 2836 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2777

                                                                   
Query: 165  caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 219
            ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 2776 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2722



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  tgcgtgcccatgtactcctc 357
            ||||||||||||||||||||
Sbjct: 2603 tgcgtgcccatgtactcctc 2584
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>dbj|AK066737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079G10, full
            insert sequence
          Length = 2747

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                        
Query: 105  ctcaaatggagatgctgttggggatgcccatctccatcaccatcttctcgtccgtgggat 164
            ||||||| ||||||||||||||||| ||||||||||||||   | ||  |||| | || |
Sbjct: 2343 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2284

                                                                   
Query: 165  caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 219
            ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 2283 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2229



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  tgcgtgcccatgtactcctc 357
            ||||||||||||||||||||
Sbjct: 2110 tgcgtgcccatgtactcctc 2091
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>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                         
Query: 105   ctcaaatggagatgctgttggggatgcccatctccatcaccatcttctcgtccgtgggat 164
             ||||||| ||||||||||||||||| ||||||||||||||   | ||  |||| | || |
Sbjct: 68209 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 68150

                                                                    
Query: 165   caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 219
             ||||||  |||||| |||||||||| |||||||||| ||||| ||| || |||||
Sbjct: 68149 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 68095



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   tgcgtgcccatgtactcctc 357
             ||||||||||||||||||||
Sbjct: 67976 tgcgtgcccatgtactcctc 67957
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>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 105  ctcaaatggagatgctgttggggatgcccat 135
            |||| ||||||||||||||||||||||||||
Sbjct: 2447 ctcagatggagatgctgttggggatgcccat 2417
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>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 105  ctcaaatggagatgctgttggggatgcccat 135
            |||| ||||||||||||||||||||||||||
Sbjct: 2926 ctcagatggagatgctgttggggatgcccat 2896
to top
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 105   ctcaaatggagatgctgttggggatgcccat 135
             |||| ||||||||||||||||||||||||||
Sbjct: 65817 ctcagatggagatgctgttggggatgcccat 65787



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 113   gagatgctgttggggatgccc 133
             |||||||||||||||||||||
Sbjct: 47230 gagatgctgttggggatgccc 47210
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 105      ctcaaatggagatgctgttggggatgcccat 135
                |||| ||||||||||||||||||||||||||
Sbjct: 27821687 ctcagatggagatgctgttggggatgcccat 27821657



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 105      ctcaaatggagatgctgttggggatgccc 133
                ||||||||| |||||||||||||||||||
Sbjct: 14300017 ctcaaatggtgatgctgttggggatgccc 14300045



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 110      atggagatgctgttggggatgccc 133
                ||||||||||||||||||||||||
Sbjct: 30026445 atggagatgctgttggggatgccc 30026422



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 113      gagatgctgttggggatgccc 133
                |||||||||||||||||||||
Sbjct: 27803100 gagatgctgttggggatgccc 27803080
to top
>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene)
          Length = 2967

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 106  tcaaatggagatgctgttggggatgcc 132
            |||||||||||||||||||||||||||
Sbjct: 2774 tcaaatggagatgctgttggggatgcc 2748



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 174  acggcctgagcagcacatacggcaccatgccggcgcc 210
            ||||| |||||||| | |||||||| |||||||||||
Sbjct: 2721 acggcttgagcagctcgtacggcacgatgccggcgcc 2685
to top
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 105  ctcaaatggagatgctgttggggatgcccat 135
            |||| ||||||||||||||||||||||||||
Sbjct: 2920 ctcagatggagatgctgttggggatgcccat 2890
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 105      ctcaaatggagatgctgttggggatgcccat 135
                |||| ||||||||||||||||||||||||||
Sbjct: 27913011 ctcagatggagatgctgttggggatgcccat 27912981



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 105      ctcaaatggagatgctgttggggatgccc 133
                ||||||||| |||||||||||||||||||
Sbjct: 14294992 ctcaaatggtgatgctgttggggatgccc 14295020



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 110      atggagatgctgttggggatgccc 133
                ||||||||||||||||||||||||
Sbjct: 30117867 atggagatgctgttggggatgccc 30117844



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 113      gagatgctgttggggatgccc 133
                |||||||||||||||||||||
Sbjct: 27894424 gagatgctgttggggatgccc 27894404
to top
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 105  ctcaaatggagatgctgttggggatgcccat 135
            |||| ||||||||||||||||||||||||||
Sbjct: 1333 ctcagatggagatgctgttggggatgcccat 1303
to top
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 105  ctcaaatggagatgctgttggggatgcccat 135
            |||| ||||||||||||||||||||||||||
Sbjct: 2598 ctcagatggagatgctgttggggatgcccat 2568
to top
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 105  ctcaaatggagatgctgttggggatgcccat 135
            |||| ||||||||||||||||||||||||||
Sbjct: 2928 ctcagatggagatgctgttggggatgcccat 2898
to top
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 105  ctcaaatggagatgctgttggggatgcccat 135
            |||| ||||||||||||||||||||||||||
Sbjct: 1498 ctcagatggagatgctgttggggatgcccat 1468
to top
>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 104 gctcaaatggagatgctgttggggatgccc 133
           ||||| ||||||||||||||||||||||||
Sbjct: 755 gctcagatggagatgctgttggggatgccc 726
to top
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 104  gctcaaatggagatgctgttggggatgccc 133
            ||||| ||||||||||||||||||||||||
Sbjct: 4664 gctcagatggagatgctgttggggatgccc 4635
to top
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 102  cagctcaaatggagatgctgttggggatgcccat 135
            ||||||| ||||||| ||||||||||||||||||
Sbjct: 2768 cagctcagatggagacgctgttggggatgcccat 2735
to top
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 104  gctcaaatggagatgctgttggggatgccc 133
            ||||| ||||||||||||||||||||||||
Sbjct: 2066 gctcagatggagatgctgttggggatgccc 2037
to top
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 105 ctcaaatggagatgctgttggggatgccc 133
           |||| ||||||||||||||||||||||||
Sbjct: 907 ctcagatggagatgctgttggggatgccc 879
to top
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
             sequence
          Length = 158714

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 105   ctcaaatggagatgctgttggggatgccc 133
             ||||||||| |||||||||||||||||||
Sbjct: 49246 ctcaaatggtgatgctgttggggatgccc 49274
to top
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18,
              complete sequence
          Length = 122159

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 105    ctcaaatggagatgctgttggggatgccc 133
              ||||||||| |||||||||||||||||||
Sbjct: 111405 ctcaaatggtgatgctgttggggatgccc 111433
to top
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 110  atggagatgctgttggggatgccc 133
            ||||||||||||||||||||||||
Sbjct: 2609 atggagatgctgttggggatgccc 2586
to top
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 110  atggagatgctgttggggatgccc 133
            ||||||||||||||||||||||||
Sbjct: 1082 atggagatgctgttggggatgccc 1059
to top
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 110  atggagatgctgttggggatgccc 133
            ||||||||||||||||||||||||
Sbjct: 2691 atggagatgctgttggggatgccc 2668
to top
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 110   atggagatgctgttggggatgccc 133
             ||||||||||||||||||||||||
Sbjct: 81306 atggagatgctgttggggatgccc 81329
to top
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 110  atggagatgctgttggggatgccc 133
            ||||||||||||||||||||||||
Sbjct: 2591 atggagatgctgttggggatgccc 2568
to top
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 110  atggagatgctgttggggatgccc 133
            ||||||||||||||||||||||||
Sbjct: 2724 atggagatgctgttggggatgccc 2701
to top
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 104 gctcaaatggagatgctgttggggatgcccat 135
           ||||| ||||||||||||||||| ||||||||
Sbjct: 369 gctcatatggagatgctgttgggaatgcccat 338
to top
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 104  gctcaaatggagatgctgttggggatgcccat 135
            ||||| ||||||||||||||||| ||||||||
Sbjct: 2902 gctcatatggagatgctgttgggaatgcccat 2871
to top
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds
          Length = 1814

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 110  atggagatgctgttggggatgccc 133
            ||||||||||||||||||||||||
Sbjct: 1552 atggagatgctgttggggatgccc 1529
to top
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 110  atggagatgctgttggggatgccc 133
            ||||||||||||||||||||||||
Sbjct: 2653 atggagatgctgttggggatgccc 2630
to top
>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 174  acggcctgagcagcacatacggcaccatgccggcgccg 211
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 2828 acggcttgagcagctcgtacggcacgatgccggcgccg 2791



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 105  ctcaaatggagatgctgttggggatgccc 133
            |||| |||||||||||||| |||||||||
Sbjct: 2882 ctcagatggagatgctgtttgggatgccc 2854
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 174     acggcctgagcagcacatacggcaccatgccggcgccg 211
               ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 5277016 acggcttgagcagctcgtacggcacgatgccggcgccg 5277053



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 105     ctcaaatggagatgctgttggggatgccc 133
               |||| |||||||||||||| |||||||||
Sbjct: 5276962 ctcagatggagatgctgtttgggatgccc 5276990
to top
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 174  acggcctgagcagcacatacggcaccatgccggcgccg 211
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 3319 acggcttgagcagctcgtacggcacgatgccggcgccg 3356



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 105  ctcaaatggagatgctgttggggatgccc 133
            |||| |||||||||||||| |||||||||
Sbjct: 3265 ctcagatggagatgctgtttgggatgccc 3293
to top
>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 174  acggcctgagcagcacatacggcaccatgccggcgccg 211
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 2827 acggcttgagcagctcgtacggcacgatgccggcgccg 2790



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 105  ctcaaatggagatgctgttggggatgccc 133
            |||| |||||||||||||| |||||||||
Sbjct: 2881 ctcagatggagatgctgtttgggatgccc 2853
to top
>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 174  acggcctgagcagcacatacggcaccatgccggcgccg 211
            ||||| |||||||| | |||||||| ||||||||||||
Sbjct: 1989 acggcttgagcagctcgtacggcacgatgccggcgccg 1952



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 105  ctcaaatggagatgctgttggggatgccc 133
            |||| |||||||||||||| |||||||||
Sbjct: 2043 ctcagatggagatgctgtttgggatgccc 2015
to top
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 113  gagatgctgttggggatgccc 133
            |||||||||||||||||||||
Sbjct: 2594 gagatgctgttggggatgccc 2574
to top
>gb|AC104785.5| Homo sapiens BAC clone RP11-84C13 from 4, complete sequence
          Length = 112003

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 269   caggtgctctccttgaactcc 289
             |||||||||||||||||||||
Sbjct: 69670 caggtgctctccttgaactcc 69690
to top
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   gagatgctgttggggatgccc 133
             |||||||||||||||||||||
Sbjct: 10793 gagatgctgttggggatgccc 10813
to top
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 105  ctcaaatggagatgctgttggggatgccc 133
            ||||||||||||||||||| || ||||||
Sbjct: 2623 ctcaaatggagatgctgtttggaatgccc 2595
to top
>dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, section 87/105
          Length = 219256

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 240   tccactcatccacctgctcca 260
             |||||||||||||||||||||
Sbjct: 49785 tccactcatccacctgctcca 49805
to top
>dbj|AP001614.1| Homo sapiens genomic DNA, chromosome 21, clone:KB2042A8, MX1-D21S171
             region, complete sequence
          Length = 81896

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 240   tccactcatccacctgctcca 260
             |||||||||||||||||||||
Sbjct: 34126 tccactcatccacctgctcca 34146
to top
>ref|XM_524799.1| PREDICTED: Pan troglodytes similar to potassium voltage-gated
           channel, shaker-related subfamily, member 10; cyclic GMP
           gated potassium channel (LOC469414), mRNA
          Length = 1671

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 catctccatcaccatcttct 152
           ||||||||||||||||||||
Sbjct: 681 catctccatcaccatcttct 700
to top
>ref|NM_005549.2| Homo sapiens potassium voltage-gated channel, shaker-related
            subfamily, member 10 (KCNA10), mRNA
          Length = 1959

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  catctccatcaccatcttct 152
            ||||||||||||||||||||
Sbjct: 1069 catctccatcaccatcttct 1088
to top
>gb|BC074990.2| Homo sapiens potassium voltage-gated channel, shaker-related
           subfamily, member 10, mRNA (cDNA clone MGC:103916
           IMAGE:30915306), complete cds
          Length = 1599

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 catctccatcaccatcttct 152
           ||||||||||||||||||||
Sbjct: 711 catctccatcaccatcttct 730
to top
>gb|AC132405.3| Mus musculus BAC clone RP23-332I1 from chromosome 3, complete sequence
          Length = 207726

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    catctccatcaccatcttct 152
              ||||||||||||||||||||
Sbjct: 187186 catctccatcaccatcttct 187167
to top
>ref|XM_582224.2| PREDICTED: Bos taurus similar to potassium voltage-gated channel,
           shaker-related subfamily, member 10 (LOC538721), mRNA
          Length = 1643

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 catctccatcaccatcttct 152
           ||||||||||||||||||||
Sbjct: 762 catctccatcaccatcttct 781
to top
>ref|XM_983966.1| PREDICTED: Mus musculus potassium voltage-gated channel,
           shaker-related subfamily, member 10 (Kcna10), mRNA
          Length = 1826

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 catctccatcaccatcttct 152
           ||||||||||||||||||||
Sbjct: 840 catctccatcaccatcttct 859
to top
>ref|XM_143471.4| PREDICTED: Mus musculus potassium voltage-gated channel,
           shaker-related subfamily, member 10 (Kcna10), mRNA
          Length = 1826

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 catctccatcaccatcttct 152
           ||||||||||||||||||||
Sbjct: 840 catctccatcaccatcttct 859
to top
>emb|CR354437.13| Zebrafish DNA sequence from clone DKEY-11D10 in linkage group 23,
            complete sequence
          Length = 205907

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 275  ctctccttgaactcctcaaa 294
            ||||||||||||||||||||
Sbjct: 3675 ctctccttgaactcctcaaa 3694
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>ref|XM_854998.1| PREDICTED: Canis familiaris similar to Signal transducer and
           activator of transcription 5B, transcript variant 4
           (LOC490969), mRNA
          Length = 2640

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 aactcctcaaatgcctggttgatc 307
           ||||||||||||| ||||||||||
Sbjct: 452 aactcctcaaatgtctggttgatc 429
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>ref|XM_854961.1| PREDICTED: Canis familiaris similar to Signal transducer and
           activator of transcription 5B, transcript variant 3
           (LOC490969), mRNA
          Length = 2814

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 aactcctcaaatgcctggttgatc 307
           ||||||||||||| ||||||||||
Sbjct: 452 aactcctcaaatgtctggttgatc 429
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>ref|XM_854922.1| PREDICTED: Canis familiaris similar to Signal transducer and
           activator of transcription 5B, transcript variant 2
           (LOC490969), mRNA
          Length = 2787

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 aactcctcaaatgcctggttgatc 307
           ||||||||||||| ||||||||||
Sbjct: 452 aactcctcaaatgtctggttgatc 429
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>ref|XM_548092.2| PREDICTED: Canis familiaris similar to Signal transducer and
           activator of transcription 5B, transcript variant 1
           (LOC490969), mRNA
          Length = 2797

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 aactcctcaaatgcctggttgatc 307
           ||||||||||||| ||||||||||
Sbjct: 453 aactcctcaaatgtctggttgatc 430
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>ref|XM_854847.1| PREDICTED: Canis familiaris similar to Signal transducer and
           activator of transcription 5A, transcript variant 8
           (LOC490968), mRNA
          Length = 2773

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 aactcctcaaatgcctggttgatc 307
           ||||||||||||| ||||||||||
Sbjct: 452 aactcctcaaatgtctggttgatc 429
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>ref|XM_854813.1| PREDICTED: Canis familiaris similar to Signal transducer and
           activator of transcription 5A, transcript variant 7
           (LOC490968), mRNA
          Length = 2749

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 aactcctcaaatgcctggttgatc 307
           ||||||||||||| ||||||||||
Sbjct: 452 aactcctcaaatgtctggttgatc 429
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>ref|XM_854777.1| PREDICTED: Canis familiaris similar to Signal transducer and
           activator of transcription 5A, transcript variant 6
           (LOC490968), mRNA
          Length = 2755

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 aactcctcaaatgcctggttgatc 307
           ||||||||||||| ||||||||||
Sbjct: 452 aactcctcaaatgtctggttgatc 429
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>ref|XM_854742.1| PREDICTED: Canis familiaris similar to Signal transducer and
           activator of transcription 5A, transcript variant 5
           (LOC490968), mRNA
          Length = 2644

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 aactcctcaaatgcctggttgatc 307
           ||||||||||||| ||||||||||
Sbjct: 452 aactcctcaaatgtctggttgatc 429
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>ref|XM_854710.1| PREDICTED: Canis familiaris similar to Signal transducer and
           activator of transcription 5A, transcript variant 4
           (LOC490968), mRNA
          Length = 2740

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 aactcctcaaatgcctggttgatc 307
           ||||||||||||| ||||||||||
Sbjct: 452 aactcctcaaatgtctggttgatc 429
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>ref|XM_854676.1| PREDICTED: Canis familiaris similar to Signal transducer and
           activator of transcription 5A, transcript variant 3
           (LOC490968), mRNA
          Length = 2557

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 aactcctcaaatgcctggttgatc 307
           ||||||||||||| ||||||||||
Sbjct: 452 aactcctcaaatgtctggttgatc 429
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>ref|XM_548091.2| PREDICTED: Canis familiaris similar to Signal transducer and
           activator of transcription 5A, transcript variant 1
           (LOC490968), mRNA
          Length = 2737

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 284 aactcctcaaatgcctggttgatc 307
           ||||||||||||| ||||||||||
Sbjct: 452 aactcctcaaatgtctggttgatc 429
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>ref|XM_547232.2| PREDICTED: Canis familiaris similar to potassium voltage-gated
           channel, shaker-related subfamily, member 10
           (LOC490111), mRNA
          Length = 1650

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 catctccatcaccatcttct 152
           ||||||||||||||||||||
Sbjct: 795 catctccatcaccatcttct 814
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>ref|XM_946728.1| Theileria annulata strain Ankara hypothetical protein (TA15705)
           partial mRNA
          Length = 1008

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 ccatctccatcaccatcttc 151
           ||||||||||||||||||||
Sbjct: 95  ccatctccatcaccatcttc 76
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>gb|AC159626.2| Mus musculus BAC clone RP24-209A23 from chromosome 12, complete
             sequence
          Length = 157411

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   cttccaggtgctctccttga 284
             ||||||||||||||||||||
Sbjct: 77245 cttccaggtgctctccttga 77226
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>emb|AL512592.14| Human DNA sequence from clone RP11-35D6 on chromosome 6 Contains part
             of a novel gene (FLJ00197), complete sequence
          Length = 60858

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   caaagatggcaggactatgg 404
             ||||||||||||||||||||
Sbjct: 46966 caaagatggcaggactatgg 46985
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>emb|AL358215.16| Human DNA sequence from clone RP11-470L19 on chromosome 1 Contains the
             3' end of the PROK1 gene for Prokineticin 1, a putatative
             novel transcript, an unprocessed pseudogene, a novel
             transcript and the LOC395116 gene for the shaker subfamily
             potassium channel KCNA10, complete sequence
          Length = 101529

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   catctccatcaccatcttct 152
             ||||||||||||||||||||
Sbjct: 64506 catctccatcaccatcttct 64487
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>gb|BC077139.1| Danio rerio wu:fc51g12, mRNA (cDNA clone IMAGE:7146502), partial cds
          Length = 2835

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 277  ctccttgaactcctcaaatgcctg 300
            |||||||||||||||||| |||||
Sbjct: 1903 ctccttgaactcctcaaaagcctg 1880
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>gb|BC069165.1| Homo sapiens cDNA clone IMAGE:7216995
          Length = 1959

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 133 catctccatcaccatcttct 152
           ||||||||||||||||||||
Sbjct: 891 catctccatcaccatcttct 872
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>gb|AC010012.5| Drosophila melanogaster 3L BAC RP98-22J16 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 170466

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   ccatctccatcaccatcttc 151
             ||||||||||||||||||||
Sbjct: 69693 ccatctccatcaccatcttc 69712
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>dbj|AK157965.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
           library, clone:F930012I12 product:Cyclic GMP gated
           potassium channel homolog [Homo sapiens], full insert
           sequence
          Length = 1827

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 catctccatcaccatcttct 152
           ||||||||||||||||||||
Sbjct: 841 catctccatcaccatcttct 860
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>ref|XM_688015.1| PREDICTED: Danio rerio hypothetical protein LOC553235 (LOC553235),
            mRNA
          Length = 4007

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 277  ctccttgaactcctcaaatgcctg 300
            |||||||||||||||||| |||||
Sbjct: 1824 ctccttgaactcctcaaaagcctg 1801
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>emb|BX324196.4| Zebrafish DNA sequence from clone CH211-142A12 in linkage group 23,
             complete sequence
          Length = 89652

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   ctctccttgaactcctcaaa 294
             ||||||||||||||||||||
Sbjct: 37123 ctctccttgaactcctcaaa 37142
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>ref|XM_227577.3| PREDICTED: Rattus norvegicus potassium voltage-gated channel,
           shaker-related subfamily, member 10 (predicted)
           (Kcna10_predicted), mRNA
          Length = 1603

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 catctccatcaccatcttct 152
           ||||||||||||||||||||
Sbjct: 710 catctccatcaccatcttct 729
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>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence
          Length = 1304

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 110 atggagatgctgttggggatgccc 133
           |||||||||||| |||||||||||
Sbjct: 138 atggagatgctgctggggatgccc 161
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>gb|AY104322.1| Zea mays PCO093659 mRNA sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 110  atggagatgctgttggggatgccc 133
            |||||||||||| |||||||||||
Sbjct: 1210 atggagatgctgctggggatgccc 1187
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>gb|AE003474.4| Drosophila melanogaster chromosome 3L, section 8 of 83 of the complete
              sequence
          Length = 312072

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    ccatctccatcaccatcttc 151
              ||||||||||||||||||||
Sbjct: 127765 ccatctccatcaccatcttc 127784
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>gb|U96110.1|HSU96110 Homo sapiens cyclic GMP gated potassium channel (Kcn1) gene,
           complete cds
          Length = 1580

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 catctccatcaccatcttct 152
           ||||||||||||||||||||
Sbjct: 690 catctccatcaccatcttct 709
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>gb|U38182.1|OCU38182 Oryctolagus cuniculus cGMP-gated potassium channel (Kcn1) mRNA,
            complete cds
          Length = 2178

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  catctccatcaccatcttct 152
            ||||||||||||||||||||
Sbjct: 1320 catctccatcaccatcttct 1339


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,100,340
Number of Sequences: 3902068
Number of extensions: 3100340
Number of successful extensions: 57620
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57299
Number of HSP's gapped (non-prelim): 320
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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