>OTC_PEA (Q43814) Ornithine carbamoyltransferase, chloroplast precursor (EC|
           2.1.3.3) (OTCase) (Ornithine transcarbamylase)
          Length = 375

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +1

Query: 145 CFTTNGGH---TQPQTEAFTSSKNGKMSSIQGSTVSEPRRNACK 267
           CFTT G H     P +  F  S +  +SS   S+ S  RR +C+
Sbjct: 10  CFTTVGSHKPYLSPSSHNFRHSPSVSLSSSSSSSPSPLRRISCQ 53

>CID_DROME (P19538) Protein cubitus interruptus|
          Length = 1397

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +1

Query: 124 EIRIPP*CFTTNGGHTQPQTEAFTSSKN---GKMSSIQGSTVSEPRRNA 261
           EI+IP    TT GG+T+   +  TS +N    K  ++ GS   + RR++
Sbjct: 790 EIKIPKLPNTTIGGYTEDPLQNQTSFRNTVSNKQGTVSGSIQGQFRRDS 838

>HIS3_MYCPA (P60543) Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (PRA-CH)|
          Length = 115

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 359 DVDGCCVSRTVINYGPTSTKGDHAIF*SQVILH 261
           D DG  V  TV   G     GDH+ F + V+LH
Sbjct: 80  DCDGDTVLLTVDQVGGACHTGDHSCFDADVLLH 112

>YHV5_YEAST (P38851) Hypothetical 143.6 kDa protein in SPO16-REC104 intergenic|
           region
          Length = 1228

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = -3

Query: 198 TCKSLSLRLGVTPVCSETL-----WWNSNLQEILSLASKVS 91
           T K     + +TP  +ETL     W  SNLQ + +L+SK+S
Sbjct: 221 TTKDTKDVIDITPELTETLKDWTDWIESNLQTLQALSSKLS 261

>PTR3_YEAST (P43606) Protein PTR3 (Protein SSY3)|
          Length = 678

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
 Frame = -3

Query: 246 FAHC*PLYR------THFTVLRTCKSLSLRLGVTPVCSETLWWNSNLQEILSLASKVSS 88
           FA+C P+YR      TH   L T   L +   ++P C++      +  EI S+  K +S
Sbjct: 270 FANCFPMYRKKFQFNTHPKFLGTKSKLFINQSISPDCTKFALITEHKWEIYSINPKDNS 328


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,548,159
Number of Sequences: 219361
Number of extensions: 940385
Number of successful extensions: 1796
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)