ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
2dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
3gb|AY111837.1| Zea mays CL61386_1 mRNA sequence 105 1e-19
4gb|AC123761.17| Mus musculus chromosome 3, clone RP24-331E24, co... 42 1.5
5gb|AC107811.28| Mus musculus chromosome 3, clone RP23-69D10, com... 42 1.5
6gb|AC164555.2| Mus musculus BAC clone RP23-346G13 from chromosom... 42 1.5
7gb|AC010919.11| Drosophila melanogaster clone BACR32K23, complet... 42 1.5
8emb|BX640406.9| Zebrafish DNA sequence from clone DKEY-187A3 in ... 42 1.5
9emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in... 42 1.5
10gb|AC154549.2| Mus musculus BAC clone RP23-443L15 from chromosom... 42 1.5
11gb|AC010975.9| Homo sapiens BAC clone RP11-191H23 from 2, comple... 42 1.5
12emb|AJ570305.1|DME570305 Drosophila melanogaster X chromosome fr... 42 1.5
13emb|AJ570303.1|DME570303 Drosophila melanogaster X chromosome fr... 42 1.5
14emb|AJ570300.1|DME570300 Drosophila melanogaster X chromosome fr... 42 1.5
15emb|AJ570299.1|DME570299 Drosophila melanogaster X chromosome fr... 42 1.5
16emb|AJ570298.1|DME570298 Drosophila melanogaster X chromosome fr... 42 1.5
17emb|AJ570297.1|DME570297 Drosophila melanogaster X chromosome fr... 42 1.5
18emb|AJ570295.1|DME570295 Drosophila melanogaster X chromosome fr... 42 1.5
19emb|AJ570292.1|DME570292 Drosophila melanogaster X chromosome fr... 42 1.5
20emb|AJ570291.1|DME570291 Drosophila melanogaster X chromosome fr... 42 1.5
21emb|AJ570290.1|DME570290 Drosophila melanogaster X chromosome fr... 42 1.5
22emb|AJ570289.1|DME570289 Drosophila melanogaster X chromosome fr... 42 1.5
23emb|AJ570288.1|DME570288 Drosophila melanogaster X chromosome fr... 42 1.5
24emb|AJ570287.1|DME570287 Drosophila melanogaster X chromosome fr... 42 1.5
25emb|AJ570286.1|DME570286 Drosophila melanogaster X chromosome fr... 42 1.5
26emb|AJ570285.1|DME570285 Drosophila melanogaster X chromosome fr... 42 1.5
27emb|AJ570284.1|DME570284 Drosophila melanogaster X chromosome fr... 42 1.5
28emb|AJ570283.1|DME570283 Drosophila melanogaster X chromosome fr... 42 1.5
29emb|AJ570281.1|DME570281 Drosophila melanogaster X chromosome fr... 42 1.5
30emb|AJ570280.1|DME570280 Drosophila melanogaster X chromosome fr... 42 1.5
31emb|AJ570279.1|DME570279 Drosophila melanogaster X chromosome fr... 42 1.5
32gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 ... 42 1.5
33gb|AE015927.1| Clostridium tetani E88, complete genome 42 1.5
34emb|AL645524.8| Mouse DNA sequence from clone RP23-35D7 on chrom... 42 1.5
35gb|AC127026.19| Mus musculus chromosome 5, clone RP24-394H13, co... 40 5.9
36gb|AC152112.2| Pichia stipitis clone JGIAHYZ-17L12, complete seq... 40 5.9
37gb|AC152110.1| Pichia stipitis clone JGIAHYZ-13H24, complete seq... 40 5.9
38gb|AC129595.3| Mus musculus BAC clone RP23-257H19 from chromosom... 40 5.9
39gb|AC103770.5| Homo sapiens chromosome 8, clone RP11-122A3, comp... 40 5.9
40emb|CR956411.6| Pig DNA sequence from clone CH242-282N1 on chrom... 40 5.9
41emb|AL445225.9| Human DNA sequence from clone RP11-4D11 on chrom... 40 5.9
42emb|AL133215.17| Human DNA sequence from clone RP11-108L7 on chr... 40 5.9
43gb|AC093329.6| Homo sapiens chromosome 8, clone RP11-662G23, com... 40 5.9
44gb|AC068510.8| Homo sapiens chromosome 8, clone RP11-662E23, com... 40 5.9
45gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, compl... 40 5.9
46dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
47gb|AC092533.1| Homo sapiens BAC clone RP11-57I10 from 2, complet... 40 5.9
48emb|BX510317.5| Zebrafish DNA sequence from clone CH211-229G14 i... 40 5.9
49dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
50emb|AJ570301.1|DME570301 Drosophila melanogaster X chromosome fr... 40 5.9
51dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
52gb|AF466202.2| Zea mays putative pol protein gene, partial cds; ... 40 5.9
53gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols c... 40 5.9 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  143 bits (72), Expect = 6e-31
 Identities = 138/160 (86%)
 Strand = Plus / Minus

                                                                            
Query: 276      tcatttgttggacgaaacacggctgtagtattcagtgaagtctaaacggaagagaaggaa 335
                ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct: 16581294 tcatttgttagacgaaacacgactgtagtattcagtgaagtctaagcggaagagtaggaa 16581235

                                                                            
Query: 336      ctttaaatcaacatgttgctgcaggggcaactgggagataaatgaatcaagagaagctgt 395
                 || ||||||||||| || ||||  || ||||| | |||||||| |||||| ||||  ||
Sbjct: 16581234 tttcaaatcaacatgctgttgcataggtaactgagcgataaatgcatcaagtgaagaagt 16581175

                                                        
Query: 396      gtaatcttttgcaatgctgttcaaatcttcacccattttc 435
                 |||||||| || ||||| | |||||||||||||||||||
Sbjct: 16581174 ataatctttcgcgatgctatccaaatcttcacccattttc 16581135



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 232      aaatctgacacctatttctt 251
                ||||||||||||||||||||
Sbjct: 10378859 aaatctgacacctatttctt 10378878
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>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1123_B08
          Length = 134028

 Score =  143 bits (72), Expect = 6e-31
 Identities = 138/160 (86%)
 Strand = Plus / Minus

                                                                          
Query: 276    tcatttgttggacgaaacacggctgtagtattcagtgaagtctaaacggaagagaaggaa 335
              ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct: 113519 tcatttgttagacgaaacacgactgtagtattcagtgaagtctaagcggaagagtaggaa 113460

                                                                          
Query: 336    ctttaaatcaacatgttgctgcaggggcaactgggagataaatgaatcaagagaagctgt 395
               || ||||||||||| || ||||  || ||||| | |||||||| |||||| ||||  ||
Sbjct: 113459 tttcaaatcaacatgctgttgcataggtaactgagcgataaatgcatcaagtgaagaagt 113400

                                                      
Query: 396    gtaatcttttgcaatgctgttcaaatcttcacccattttc 435
               |||||||| || ||||| | |||||||||||||||||||
Sbjct: 113399 ataatctttcgcgatgctatccaaatcttcacccattttc 113360
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>gb|AY111837.1| Zea mays CL61386_1 mRNA sequence
          Length = 683

 Score =  105 bits (53), Expect = 1e-19
 Identities = 137/165 (83%)
 Strand = Plus / Plus

                                                                       
Query: 271 cacactcatttgttggacgaaacacggctgtagtattcagtgaagtctaaacggaagaga 330
           |||| |||||||||||| |||||||| ||||| ||||||| |||||| |  |||||||||
Sbjct: 256 cacattcatttgttggaggaaacacgactgtaatattcagggaagtcaaggcggaagaga 315

                                                                       
Query: 331 aggaactttaaatcaacatgttgctgcaggggcaactgggagataaatgaatcaagagaa 390
           |||||||| ||||| || || || |||| ||||| ||| |  ||||| | ||||||||||
Sbjct: 316 aggaacttcaaatcgacgtgctgttgcatgggcagctgcgtaataaaagcatcaagagaa 375

                                                        
Query: 391 gctgtgtaatcttttgcaatgctgttcaaatcttcacccattttc 435
           ||||| ||||| ||||| ||||| | ||   ||||||||||||||
Sbjct: 376 gctgtataatcctttgcgatgctatccaggccttcacccattttc 420
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>gb|AC123761.17| Mus musculus chromosome 3, clone RP24-331E24, complete sequence
          Length = 192157

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 208   cctcgcaaatccaaaccaaaa 228
             |||||||||||||||||||||
Sbjct: 67296 cctcgcaaatccaaaccaaaa 67316
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>gb|AC107811.28| Mus musculus chromosome 3, clone RP23-69D10, complete sequence
          Length = 166255

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 208  cctcgcaaatccaaaccaaaa 228
            |||||||||||||||||||||
Sbjct: 9326 cctcgcaaatccaaaccaaaa 9306
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>gb|AC164555.2| Mus musculus BAC clone RP23-346G13 from chromosome 17, complete
             sequence
          Length = 211631

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 406   gcaatgctgttcaaatcttca 426
             |||||||||||||||||||||
Sbjct: 36509 gcaatgctgttcaaatcttca 36529
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>gb|AC010919.11| Drosophila melanogaster clone BACR32K23, complete sequence
          Length = 198967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    taaacttacataaactctgta 67
             |||||||||||||||||||||
Sbjct: 91542 taaacttacataaactctgta 91522
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>emb|BX640406.9| Zebrafish DNA sequence from clone DKEY-187A3 in linkage group 13,
              complete sequence
          Length = 149208

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 139    aactgaatgtgttcatgccat 159
              |||||||||||||||||||||
Sbjct: 121337 aactgaatgtgttcatgccat 121317
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>emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in linkage group 13,
              complete sequence
          Length = 193538

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 139    aactgaatgtgttcatgccat 159
              |||||||||||||||||||||
Sbjct: 128448 aactgaatgtgttcatgccat 128468
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>gb|AC154549.2| Mus musculus BAC clone RP23-443L15 from chromosome 17, complete
             sequence
          Length = 191523

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 406   gcaatgctgttcaaatcttca 426
             |||||||||||||||||||||
Sbjct: 31851 gcaatgctgttcaaatcttca 31831
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>gb|AC010975.9| Homo sapiens BAC clone RP11-191H23 from 2, complete sequence
          Length = 171249

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 214   aaatccaaaccaaaagctaaa 234
             |||||||||||||||||||||
Sbjct: 54845 aaatccaaaccaaaagctaaa 54825
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>emb|AJ570305.1|DME570305 Drosophila melanogaster X chromosome fragment, ID 301ZBMEL95
          Length = 585

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 406 taaacttacataaactctgta 386
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>emb|AJ570303.1|DME570303 Drosophila melanogaster X chromosome fragment, ID 301ZBMEL84
          Length = 580

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 401 taaacttacataaactctgta 381
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>emb|AJ570300.1|DME570300 Drosophila melanogaster X chromosome fragment, ID 301ZBMEL384
          Length = 589

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>emb|AJ570299.1|DME570299 Drosophila melanogaster X chromosome fragment, ID 301ZBMEL377
          Length = 584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>emb|AJ570298.1|DME570298 Drosophila melanogaster X chromosome fragment, ID 301ZBMEL229
          Length = 584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>emb|AJ570297.1|DME570297 Drosophila melanogaster X chromosome fragment, ID 301ZBMEL191
          Length = 576

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 397 taaacttacataaactctgta 377
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>emb|AJ570295.1|DME570295 Drosophila melanogaster X chromosome fragment, ID 301ZBMEL157
          Length = 572

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 394 taaacttacataaactctgta 374
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>emb|AJ570292.1|DME570292 Drosophila melanogaster X chromosome fragment, ID 301ZBMEL131
          Length = 588

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 409 taaacttacataaactctgta 389
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>emb|AJ570291.1|DME570291 Drosophila melanogaster X chromosome fragment, ID 301MEL20
          Length = 584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>emb|AJ570290.1|DME570290 Drosophila melanogaster X chromosome fragment, ID 301MEL19
          Length = 584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>emb|AJ570289.1|DME570289 Drosophila melanogaster X chromosome fragment, ID 301MEL18
          Length = 584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>emb|AJ570288.1|DME570288 Drosophila melanogaster X chromosome fragment, ID 301MEL17
          Length = 584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>emb|AJ570287.1|DME570287 Drosophila melanogaster X chromosome fragment, ID 301MEL16
          Length = 584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>emb|AJ570286.1|DME570286 Drosophila melanogaster X chromosome fragment, ID 301MEL15
          Length = 584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>emb|AJ570285.1|DME570285 Drosophila melanogaster X chromosome fragment, ID 301MEL14
          Length = 584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>emb|AJ570284.1|DME570284 Drosophila melanogaster X chromosome fragment, ID 301MEL13
          Length = 573

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 394 taaacttacataaactctgta 374
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>emb|AJ570283.1|DME570283 Drosophila melanogaster X chromosome fragment, ID 301MEL12
          Length = 584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>emb|AJ570281.1|DME570281 Drosophila melanogaster X chromosome fragment, ID 301MEL11
          Length = 573

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 394 taaacttacataaactctgta 374
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>emb|AJ570280.1|DME570280 Drosophila melanogaster X chromosome fragment, ID 301MEL02
          Length = 584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>emb|AJ570279.1|DME570279 Drosophila melanogaster X chromosome fragment, ID 301MEL01
          Length = 584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  taaacttacataaactctgta 67
           |||||||||||||||||||||
Sbjct: 405 taaacttacataaactctgta 385
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>gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 of 74 of the complete
              sequence
          Length = 303344

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 47     taaacttacataaactctgta 67
              |||||||||||||||||||||
Sbjct: 259456 taaacttacataaactctgta 259436
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>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 415     ttcaaatcttcacccattttctgaa 439
               |||||||||||||||||||| ||||
Sbjct: 1113557 ttcaaatcttcacccattttatgaa 1113581
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>emb|AL645524.8| Mouse DNA sequence from clone RP23-35D7 on chromosome 11, complete
              sequence
          Length = 210163

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 29     acaaatgtcaaatccaggtaa 49
              |||||||||||||||||||||
Sbjct: 206882 acaaatgtcaaatccaggtaa 206862
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>gb|AC127026.19| Mus musculus chromosome 5, clone RP24-394H13, complete sequence
          Length = 212213

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     taaacttacataaactctgt 66
              ||||||||||||||||||||
Sbjct: 187646 taaacttacataaactctgt 187665
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>gb|AC152112.2| Pichia stipitis clone JGIAHYZ-17L12, complete sequence
          Length = 34576

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   aatccaaaccaaaagctaaa 234
             ||||||||||||||||||||
Sbjct: 21656 aatccaaaccaaaagctaaa 21675
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>gb|AC152110.1| Pichia stipitis clone JGIAHYZ-13H24, complete sequence
          Length = 36108

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  aatccaaaccaaaagctaaa 234
            ||||||||||||||||||||
Sbjct: 9843 aatccaaaccaaaagctaaa 9862
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>gb|AC129595.3| Mus musculus BAC clone RP23-257H19 from chromosome 7, complete sequence
          Length = 214318

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     aaacaaatgtcaaatccagg 46
              ||||||||||||||||||||
Sbjct: 103496 aaacaaatgtcaaatccagg 103515
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>gb|AC103770.5| Homo sapiens chromosome 8, clone RP11-122A3, complete sequence
          Length = 176632

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 159    ttgaactgacaatatatcaa 178
              ||||||||||||||||||||
Sbjct: 159446 ttgaactgacaatatatcaa 159465
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>emb|CR956411.6| Pig DNA sequence from clone CH242-282N1 on chromosome 17, complete
              sequence
          Length = 221712

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    aactttaaatcaacatgttg 353
              ||||||||||||||||||||
Sbjct: 117374 aactttaaatcaacatgttg 117355
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>emb|AL445225.9| Human DNA sequence from clone RP11-4D11 on chromosome 13, complete
             sequence
          Length = 171764

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   actgggagataaatgaatca 384
             ||||||||||||||||||||
Sbjct: 51204 actgggagataaatgaatca 51185
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>emb|AL133215.17| Human DNA sequence from clone RP11-108L7 on chromosome 10 Contains the 3'
              end of the C10orf6 gene for chromosome 10 open reading
              frame 6, the SEMA4G gene for sema domain immunoglobulin
              domain (Ig) transmembrane domain (TM) and short cytoplasmic
              domain (semaphorin) 4G, the MRPL43 gene for mitochondrial
              ribosomal protein L43, the C10orf2 gene for chromosome 10
              open reading frame 2, the gene for a novel protein
              (KIAA1813) (LAPSER1), a novel gene, the gene for a novel
              protein (FLJ23209 FLJ00011), the gene for a novel
              tricarboxylate carrier domain containing protein (FLJ34185
              FLJ35692), the gene for a novel kazal-type serine protease
              inhibitor domain and immunoglobulin domain containing
              protein (FKSG28) (FKSG4), the 3' end of a novel gene and
              six CpG islands, complete sequence
          Length = 181086

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 31     aaatgtcaaatccaggtaaactta 54
              |||||||||| |||||||||||||
Sbjct: 139525 aaatgtcaaaaccaggtaaactta 139548
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>gb|AC093329.6| Homo sapiens chromosome 8, clone RP11-662G23, complete sequence
          Length = 191820

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    ttgaactgacaatatatcaa 178
              ||||||||||||||||||||
Sbjct: 169384 ttgaactgacaatatatcaa 169365
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>gb|AC068510.8| Homo sapiens chromosome 8, clone RP11-662E23, complete sequence
          Length = 191820

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    ttgaactgacaatatatcaa 178
              ||||||||||||||||||||
Sbjct: 169383 ttgaactgacaatatatcaa 169364
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>gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, complete sequence
          Length = 247769

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    gacaactgaatgtgttcatg 155
              ||||||||||||||||||||
Sbjct: 197033 gacaactgaatgtgttcatg 197014



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    gacaactgaatgtgttcatg 155
              ||||||||||||||||||||
Sbjct: 115917 gacaactgaatgtgttcatg 115898
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 213     caaatccaaaccaaaagctaaatc 236
               |||||||||| |||||||||||||
Sbjct: 7580018 caaatccaaatcaaaagctaaatc 7580041
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>gb|AC092533.1| Homo sapiens BAC clone RP11-57I10 from 2, complete sequence
          Length = 121688

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   ttcaaatcttcacccatttt 434
             ||||||||||||||||||||
Sbjct: 24378 ttcaaatcttcacccatttt 24359
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>emb|BX510317.5| Zebrafish DNA sequence from clone CH211-229G14 in linkage group 9,
             complete sequence
          Length = 159458

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   tggataaacatcttcaacag 130
             ||||||||||||||||||||
Sbjct: 45426 tggataaacatcttcaacag 45445
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>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1104_G11
          Length = 140093

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   aaatctgacacctatttctt 251
             ||||||||||||||||||||
Sbjct: 86564 aaatctgacacctatttctt 86583
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>emb|AJ570301.1|DME570301 Drosophila melanogaster X chromosome fragment, ID 301ZBMEL398
          Length = 573

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 47  taaacttacataaactctgt 66
           ||||||||||||||||||||
Sbjct: 394 taaacttacataaactctgt 375
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>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1705_E12
          Length = 191416

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 213    caaatccaaaccaaaagctaaatc 236
              |||||||||| |||||||||||||
Sbjct: 173724 caaatccaaatcaaaagctaaatc 173747
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>gb|AF466202.2| Zea mays putative pol protein gene, partial cds; and putative gag-pol
             precursor -orf2, putative Fourf gag/pol protein, putative
             NADP-dependent malic enzyme, putative argonaute protein,
             putative pinhead protein, putative pol protein, putative
             gag protein, putative TNP2, r1-B73 proteins, putative
             genetic modifier, putative S-receptor kinase, putative
             aldose reductase-related protein, putative glutathione
             peroxidase, putative glycerol 3-phosphate permease,
             putative response regulator, and putative 4-coumarate-CoA
             ligase-like protein genes, complete cds
          Length = 290350

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   atgtgttcatgccattgaac 164
             ||||||||||||||||||||
Sbjct: 40164 atgtgttcatgccattgaac 40183
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>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome
          Length = 1138011

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    tgttcatgccattgaactga 167
              ||||||||||||||||||||
Sbjct: 858494 tgttcatgccattgaactga 858475


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,754,806
Number of Sequences: 3902068
Number of extensions: 4754806
Number of successful extensions: 109040
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108837
Number of HSP's gapped (non-prelim): 202
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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