ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HAK12_ORYSA (Q8VXB1) Putative potassium transporter 12 (OsHAK12) 55 6e-08
2HAK11_ORYSA (Q7XLC6) Probable potassium transporter 11 (OsHAK11) 55 6e-08
3POT10_ARATH (Q9SA05) Putative potassium transporter 10 (AtPOT10) 48 5e-06
4POT11_ARATH (O64769) Potassium transporter 11 (AtPOT11) 47 2e-05
5POT9_ARATH (O49423) Putative potassium transporter 9 (AtPOT9) 45 6e-05
6POT1_ARATH (O22397) Potassium transporter 1 (AtPOT1) (AtKUP1) (A... 36 0.020
7POT4_ARATH (Q9LD18) Potassium transporter 4 (AtPOT4) (AtKUP3) (A... 34 0.077
8HAK3_ORYSA (Q5ZC87) Probable potassium transporter 3 (OsHAK3) 33 0.13
9HAK7_ORYSA (Q8H3P9) Potassium transporter 7 (OsHAK7) 32 0.38
10POT3_ARATH (Q9FE38) Potassium transporter 3 (AtPOT3) (AtKUP4) (A... 32 0.38
11XPOT_HUMAN (O43592) Exportin-T (tRNA exportin) (Exportin(tRNA)) 30 1.9
12XPOT_MOUSE (Q9CRT8) Exportin-T (tRNA exportin) (Exportin(tRNA)) ... 28 4.2
13HAK2_ORYSA (Q942X8) Probable potassium transporter 2 (OsHAK2) 28 4.2
14POLN_SAGV (Q9JGL0) Nonstructural polyprotein (Polyprotein nsP123... 28 4.2
15POLN_GETV (Q5Y389) Nonstructural polyprotein (Polyprotein nsP123... 28 4.2
16KUP1_RHIME (Q92RN0) Probable potassium transport system protein ... 28 5.5
17POLN_RRVT (P13888) Nonstructural polyprotein (Polyprotein nsP123... 28 7.2
18BDF1_YEAST (P35817) Protein BDF1 27 9.4
19GLGC_BACLD (Q65FS5) Glucose-1-phosphate adenylyltransferase (EC ... 27 9.4

>HAK12_ORYSA (Q8VXB1) Putative potassium transporter 12 (OsHAK12)|
          Length = 793

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = -2

Query: 355 RICRENSVMFNIPHESLLNVGQIYYI 278
           +ICRENSV+FN+PHESLLNVGQIYYI
Sbjct: 768 KICRENSVIFNVPHESLLNVGQIYYI 793



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>HAK11_ORYSA (Q7XLC6) Probable potassium transporter 11 (OsHAK11)|
          Length = 791

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = -2

Query: 355 RICRENSVMFNIPHESLLNVGQIYYI 278
           +ICRENSV+FN+PHESLLNVGQIYYI
Sbjct: 766 KICRENSVIFNVPHESLLNVGQIYYI 791



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>POT10_ARATH (Q9SA05) Putative potassium transporter 10 (AtPOT10)|
          Length = 787

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = -2

Query: 355 RICRENSVMFNIPHESLLNVGQIYYI 278
           +ICRENS +FN+P ESLLNVGQI+Y+
Sbjct: 762 KICRENSAIFNVPQESLLNVGQIFYV 787



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>POT11_ARATH (O64769) Potassium transporter 11 (AtPOT11)|
          Length = 792

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 18/26 (69%), Positives = 25/26 (96%)
 Frame = -2

Query: 355 RICRENSVMFNIPHESLLNVGQIYYI 278
           +ICRE+SV++N+P ESLLNVGQI+Y+
Sbjct: 767 KICREHSVIYNVPQESLLNVGQIFYV 792



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>POT9_ARATH (O49423) Putative potassium transporter 9 (AtPOT9)|
          Length = 807

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 16/26 (61%), Positives = 24/26 (92%)
 Frame = -2

Query: 355 RICRENSVMFNIPHESLLNVGQIYYI 278
           +ICR NSV+ ++PHE+LLNVGQ++Y+
Sbjct: 782 KICRANSVILHVPHETLLNVGQVFYV 807



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>POT1_ARATH (O22397) Potassium transporter 1 (AtPOT1) (AtKUP1) (AtKT1)|
          Length = 712

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -2

Query: 349 CRENSVMFNIPHESLLNVGQIYYI 278
           CR   V+ N+PH SLL VG +YY+
Sbjct: 689 CRGTDVVLNVPHTSLLEVGMVYYV 712



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>POT4_ARATH (Q9LD18) Potassium transporter 4 (AtPOT4) (AtKUP3) (AtKT4)|
          Length = 789

 Score = 34.3 bits (77), Expect = 0.077
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -2

Query: 349 CRENSVMFNIPHESLLNVGQIYYI 278
           CR  +V  NIPH SL+ VG IYY+
Sbjct: 766 CRGPAVALNIPHISLIEVGMIYYV 789



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>HAK3_ORYSA (Q5ZC87) Probable potassium transporter 3 (OsHAK3)|
          Length = 808

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -2

Query: 349 CRENSVMFNIPHESLLNVGQIYYI 278
           CR   ++ NIPH SL+ VG IYY+
Sbjct: 785 CRGPGLVLNIPHISLIEVGMIYYV 808



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>HAK7_ORYSA (Q8H3P9) Potassium transporter 7 (OsHAK7)|
          Length = 811

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -2

Query: 349 CRENSVMFNIPHESLLNVGQIYYI 278
           CR  +V  +IPH SL+ VG IYY+
Sbjct: 788 CRGPAVALHIPHISLVEVGMIYYV 811



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>POT3_ARATH (Q9FE38) Potassium transporter 3 (AtPOT3) (AtKUP4) (AtKT3) (Tiny|
           root hair 1 protein)
          Length = 775

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 349 CRENSVMFNIPHESLLNVGQIYYI 278
           CR   VM NIPH  L+ VG  YY+
Sbjct: 752 CRSPGVMLNIPHICLIKVGMNYYL 775



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>XPOT_HUMAN (O43592) Exportin-T (tRNA exportin) (Exportin(tRNA))|
          Length = 962

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 92  EHCLKDAEGKTKSEAIPYLYSTTDKFPIYI 181
           EH LKD E K   E IP +   T KF I +
Sbjct: 728 EHMLKDCEAKDLQEFIPLINQITAKFKIQV 757



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>XPOT_MOUSE (Q9CRT8) Exportin-T (tRNA exportin) (Exportin(tRNA)) (Fragment)|
          Length = 246

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 92  EHCLKDAEGKTKSEAIPYLYSTTDKFPIYI 181
           EH LKD E K   E IP +   T KF + +
Sbjct: 12  EHMLKDCEAKDLQEFIPLINQITAKFKMQV 41



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>HAK2_ORYSA (Q942X8) Probable potassium transporter 2 (OsHAK2)|
          Length = 783

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 349 CRENSVMFNIPHESLLNVGQIYYI 278
           CR  SV  +IPH SL+ VG  Y +
Sbjct: 760 CRGPSVTLHIPHISLIEVGMAYQV 783



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>POLN_SAGV (Q9JGL0) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2466

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 143  YLYSTTDKFPIYILKQPAPFFPP 211
            YL+  TDK P Y  K P P + P
Sbjct: 1942 YLHEQTDKVPTYTSKYPRPVYSP 1964



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>POLN_GETV (Q5Y389) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2466

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 143  YLYSTTDKFPIYILKQPAPFFPP 211
            YL+  TDK P Y  K P P + P
Sbjct: 1942 YLHEQTDKVPTYTSKYPRPVYSP 1964



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>KUP1_RHIME (Q92RN0) Probable potassium transport system protein kup 1|
          Length = 622

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 20/88 (22%), Positives = 37/88 (42%)
 Frame = +3

Query: 6   ATIAIYDLSWKESI*ILHVTTQNMNVSSMNTA*KMQRAKQNLKLFPIYILRLISFLYTF* 185
           AT  +   +WK    ILH  T+++++   +    ++R  ++    P+ +     FL +  
Sbjct: 428 ATFIVIMWTWKRGTAILHAKTRHIDIPLASFIKSVERQSEHA---PVSVTGTAIFLTSDP 484

Query: 186 SSQPLFSLQRTAHQSFLLKTQYKLTSET 269
            S P   L    H   L +  + LT  T
Sbjct: 485 ESTPAALLHNIKHNHVLHQQNFILTIRT 512



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>POLN_RRVT (P13888) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: Nonstructural protein 3 (nsP3); RNA-directed
           RNA polymerase nsP4 (EC 2.7.7.48) (Nonstructural protein
           4) (nsP4)] (Fragment)
          Length = 1148

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 119 KTKSEAIPYLYSTTDKFPIYILKQPAPFFPPENGTSKLFAQNP 247
           + K  A  YL   ++K P Y+ K P P + P    S    QNP
Sbjct: 616 RLKDGARTYLTEQSEKIPTYVSKYPRPVYSPSVEDS---LQNP 655



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>BDF1_YEAST (P35817) Protein BDF1|
          Length = 686

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 101 LKDAEGKTKSEAIPYLYSTTDKFPIYILKQPAPFFPPENGTSKLFAQNPI 250
           LK  EG   ++      ++  + P+ + K+PAP  PPE   + L  QNPI
Sbjct: 101 LKKEEGGQGTKQEDLDENSKQELPMEVPKEPAPAPPPEPDMNNL-PQNPI 149



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>GLGC_BACLD (Q65FS5) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)|
           (ADP-glucose synthase) (ADP-glucose pyrophosphorylase)
           (ADPGlc PPase)
          Length = 379

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +3

Query: 6   ATIAIYDLSWKES--I*ILHVTTQNMNVSSMNTA*KMQRAKQNLKLFPIYILR 158
           ATIA+ ++SW E+    ILH T   M ++S     K +  K NL    +Y+ +
Sbjct: 148 ATIAVIEVSWAEAGRFGILH-TNDKMEITSFEE--KPKYPKSNLASMGVYVFK 197


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,464,362
Number of Sequences: 219361
Number of extensions: 951615
Number of successful extensions: 1720
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1719
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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