Clone Name | rbastl38f10 |
---|---|
Clone Library Name | barley_pub |
>HAK12_ORYSA (Q8VXB1) Putative potassium transporter 12 (OsHAK12)| Length = 793 Score = 54.7 bits (130), Expect = 6e-08 Identities = 23/26 (88%), Positives = 26/26 (100%) Frame = -2 Query: 355 RICRENSVMFNIPHESLLNVGQIYYI 278 +ICRENSV+FN+PHESLLNVGQIYYI Sbjct: 768 KICRENSVIFNVPHESLLNVGQIYYI 793
>HAK11_ORYSA (Q7XLC6) Probable potassium transporter 11 (OsHAK11)| Length = 791 Score = 54.7 bits (130), Expect = 6e-08 Identities = 23/26 (88%), Positives = 26/26 (100%) Frame = -2 Query: 355 RICRENSVMFNIPHESLLNVGQIYYI 278 +ICRENSV+FN+PHESLLNVGQIYYI Sbjct: 766 KICRENSVIFNVPHESLLNVGQIYYI 791
>POT10_ARATH (Q9SA05) Putative potassium transporter 10 (AtPOT10)| Length = 787 Score = 48.1 bits (113), Expect = 5e-06 Identities = 19/26 (73%), Positives = 24/26 (92%) Frame = -2 Query: 355 RICRENSVMFNIPHESLLNVGQIYYI 278 +ICRENS +FN+P ESLLNVGQI+Y+ Sbjct: 762 KICRENSAIFNVPQESLLNVGQIFYV 787
>POT11_ARATH (O64769) Potassium transporter 11 (AtPOT11)| Length = 792 Score = 46.6 bits (109), Expect = 2e-05 Identities = 18/26 (69%), Positives = 25/26 (96%) Frame = -2 Query: 355 RICRENSVMFNIPHESLLNVGQIYYI 278 +ICRE+SV++N+P ESLLNVGQI+Y+ Sbjct: 767 KICREHSVIYNVPQESLLNVGQIFYV 792
>POT9_ARATH (O49423) Putative potassium transporter 9 (AtPOT9)| Length = 807 Score = 44.7 bits (104), Expect = 6e-05 Identities = 16/26 (61%), Positives = 24/26 (92%) Frame = -2 Query: 355 RICRENSVMFNIPHESLLNVGQIYYI 278 +ICR NSV+ ++PHE+LLNVGQ++Y+ Sbjct: 782 KICRANSVILHVPHETLLNVGQVFYV 807
>POT1_ARATH (O22397) Potassium transporter 1 (AtPOT1) (AtKUP1) (AtKT1)| Length = 712 Score = 36.2 bits (82), Expect = 0.020 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -2 Query: 349 CRENSVMFNIPHESLLNVGQIYYI 278 CR V+ N+PH SLL VG +YY+ Sbjct: 689 CRGTDVVLNVPHTSLLEVGMVYYV 712
>POT4_ARATH (Q9LD18) Potassium transporter 4 (AtPOT4) (AtKUP3) (AtKT4)| Length = 789 Score = 34.3 bits (77), Expect = 0.077 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = -2 Query: 349 CRENSVMFNIPHESLLNVGQIYYI 278 CR +V NIPH SL+ VG IYY+ Sbjct: 766 CRGPAVALNIPHISLIEVGMIYYV 789
>HAK3_ORYSA (Q5ZC87) Probable potassium transporter 3 (OsHAK3)| Length = 808 Score = 33.5 bits (75), Expect = 0.13 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -2 Query: 349 CRENSVMFNIPHESLLNVGQIYYI 278 CR ++ NIPH SL+ VG IYY+ Sbjct: 785 CRGPGLVLNIPHISLIEVGMIYYV 808
>HAK7_ORYSA (Q8H3P9) Potassium transporter 7 (OsHAK7)| Length = 811 Score = 32.0 bits (71), Expect = 0.38 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -2 Query: 349 CRENSVMFNIPHESLLNVGQIYYI 278 CR +V +IPH SL+ VG IYY+ Sbjct: 788 CRGPAVALHIPHISLVEVGMIYYV 811
>POT3_ARATH (Q9FE38) Potassium transporter 3 (AtPOT3) (AtKUP4) (AtKT3) (Tiny| root hair 1 protein) Length = 775 Score = 32.0 bits (71), Expect = 0.38 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 Query: 349 CRENSVMFNIPHESLLNVGQIYYI 278 CR VM NIPH L+ VG YY+ Sbjct: 752 CRSPGVMLNIPHICLIKVGMNYYL 775
>XPOT_HUMAN (O43592) Exportin-T (tRNA exportin) (Exportin(tRNA))| Length = 962 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +2 Query: 92 EHCLKDAEGKTKSEAIPYLYSTTDKFPIYI 181 EH LKD E K E IP + T KF I + Sbjct: 728 EHMLKDCEAKDLQEFIPLINQITAKFKIQV 757
>XPOT_MOUSE (Q9CRT8) Exportin-T (tRNA exportin) (Exportin(tRNA)) (Fragment)| Length = 246 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +2 Query: 92 EHCLKDAEGKTKSEAIPYLYSTTDKFPIYI 181 EH LKD E K E IP + T KF + + Sbjct: 12 EHMLKDCEAKDLQEFIPLINQITAKFKMQV 41
>HAK2_ORYSA (Q942X8) Probable potassium transporter 2 (OsHAK2)| Length = 783 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -2 Query: 349 CRENSVMFNIPHESLLNVGQIYYI 278 CR SV +IPH SL+ VG Y + Sbjct: 760 CRGPSVTLHIPHISLIEVGMAYQV 783
>POLN_SAGV (Q9JGL0) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2466 Score = 28.5 bits (62), Expect = 4.2 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +2 Query: 143 YLYSTTDKFPIYILKQPAPFFPP 211 YL+ TDK P Y K P P + P Sbjct: 1942 YLHEQTDKVPTYTSKYPRPVYSP 1964
>POLN_GETV (Q5Y389) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2466 Score = 28.5 bits (62), Expect = 4.2 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +2 Query: 143 YLYSTTDKFPIYILKQPAPFFPP 211 YL+ TDK P Y K P P + P Sbjct: 1942 YLHEQTDKVPTYTSKYPRPVYSP 1964
>KUP1_RHIME (Q92RN0) Probable potassium transport system protein kup 1| Length = 622 Score = 28.1 bits (61), Expect = 5.5 Identities = 20/88 (22%), Positives = 37/88 (42%) Frame = +3 Query: 6 ATIAIYDLSWKESI*ILHVTTQNMNVSSMNTA*KMQRAKQNLKLFPIYILRLISFLYTF* 185 AT + +WK ILH T+++++ + ++R ++ P+ + FL + Sbjct: 428 ATFIVIMWTWKRGTAILHAKTRHIDIPLASFIKSVERQSEHA---PVSVTGTAIFLTSDP 484 Query: 186 SSQPLFSLQRTAHQSFLLKTQYKLTSET 269 S P L H L + + LT T Sbjct: 485 ESTPAALLHNIKHNHVLHQQNFILTIRT 512
>POLN_RRVT (P13888) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: Nonstructural protein 3 (nsP3); RNA-directed RNA polymerase nsP4 (EC 2.7.7.48) (Nonstructural protein 4) (nsP4)] (Fragment) Length = 1148 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +2 Query: 119 KTKSEAIPYLYSTTDKFPIYILKQPAPFFPPENGTSKLFAQNP 247 + K A YL ++K P Y+ K P P + P S QNP Sbjct: 616 RLKDGARTYLTEQSEKIPTYVSKYPRPVYSPSVEDS---LQNP 655
>BDF1_YEAST (P35817) Protein BDF1| Length = 686 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = +2 Query: 101 LKDAEGKTKSEAIPYLYSTTDKFPIYILKQPAPFFPPENGTSKLFAQNPI 250 LK EG ++ ++ + P+ + K+PAP PPE + L QNPI Sbjct: 101 LKKEEGGQGTKQEDLDENSKQELPMEVPKEPAPAPPPEPDMNNL-PQNPI 149
>GLGC_BACLD (Q65FS5) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)| (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) Length = 379 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +3 Query: 6 ATIAIYDLSWKES--I*ILHVTTQNMNVSSMNTA*KMQRAKQNLKLFPIYILR 158 ATIA+ ++SW E+ ILH T M ++S K + K NL +Y+ + Sbjct: 148 ATIAVIEVSWAEAGRFGILH-TNDKMEITSFEE--KPKYPKSNLASMGVYVFK 197 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,464,362 Number of Sequences: 219361 Number of extensions: 951615 Number of successful extensions: 1720 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1698 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1719 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)