>gb|AC092052.2| Homo sapiens chromosome 3 clone RP11-329N16, complete sequence
          Length = 203204

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 136    ttgaaataaataaaaggggaaccacaacat 165
              ||||||||||||||| ||||| ||||||||
Sbjct: 187522 ttgaaataaataaaaagggaatcacaacat 187551

>gb|AC183679.3| Pan troglodytes BAC clone CH251-400O3 from chromosome 10, complete
             sequence
          Length = 203130

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 179   tggtaactctcccaatgtaatagtg 203
             |||||||||||||||||| ||||||
Sbjct: 23571 tggtaactctcccaatgtcatagtg 23595

>gb|AC073221.9| Homo sapiens BAC clone RP11-543D8 from 7, complete sequence
          Length = 94027

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 139  aaataaataaaaggggaacca 159
            |||||||||||||||||||||
Sbjct: 2497 aaataaataaaaggggaacca 2477

>gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L1) gene, complete cds
          Length = 660392

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 138    gaaataaataaaaggggaacc 158
              |||||||||||||||||||||
Sbjct: 599740 gaaataaataaaaggggaacc 599760

>gb|AC004848.1| Homo sapiens PAC clone RP4-649P17 from 7, complete sequence
          Length = 135214

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 139   aaataaataaaaggggaacca 159
             |||||||||||||||||||||
Sbjct: 34234 aaataaataaaaggggaacca 34254

>gb|AC146275.2| Pan troglodytes BAC clone RP43-30A5 from 7, complete sequence
          Length = 179711

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 139  aaataaataaaaggggaacca 159
            |||||||||||||||||||||
Sbjct: 1316 aaataaataaaaggggaacca 1296

>emb|AL589882.10| Human DNA sequence from clone RP11-368F13 on chromosome 10, complete
             sequence
          Length = 69266

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 179   tggtaactctcccaatgtaatagtg 203
             |||||||||||||||||| ||||||
Sbjct: 59138 tggtaactctcccaatgtcatagtg 59162

>emb|CR931728.1| Medicago truncatula chromosome 5 clone mth2-175g3, COMPLETE SEQUENCE
          Length = 115300

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 124   attttaccaaatttgaaataaataa 148
             |||||||||||||| ||||||||||
Sbjct: 78195 attttaccaaatttaaaataaataa 78171

>emb|AL122013.5|CNS01DSU Human chromosome 14 DNA sequence BAC R-204K16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173010

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   gaaataaataaaaggggaacc 158
             |||||||||||||||||||||
Sbjct: 41589 gaaataaataaaaggggaacc 41569

>gb|AY630340.1| Philaenus spumarius mitochondrion, complete genome
          Length = 16324

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   caaatttgaaataaataaaa 150
             ||||||||||||||||||||
Sbjct: 12798 caaatttgaaataaataaaa 12817

>gb|AC115358.7| Mus musculus BAC clone RP23-190I17 from chromosome 18, complete sequence
          Length = 218573

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 126    tttaccaaatttgaaataaataaa 149
              ||||| ||||||||||||||||||
Sbjct: 148646 tttacaaaatttgaaataaataaa 148623

>gb|AC127259.3| Mus musculus BAC clone RP24-304A20 from chromosome 9, complete sequence
          Length = 162717

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   gccactggtaactctcccaa 193
             ||||||||||||||||||||
Sbjct: 22637 gccactggtaactctcccaa 22656

>gb|AC098724.3| Mus musculus BAC clone RP23-3D14 from 4, complete sequence
          Length = 190437

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    aaatttgaaataaataaaag 151
              ||||||||||||||||||||
Sbjct: 188945 aaatttgaaataaataaaag 188964

>emb|AL499605.6| Human DNA sequence from clone RP11-478L17 on chromosome 1, complete
              sequence
          Length = 188350

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    ccaaatttgaaataaataaa 149
              ||||||||||||||||||||
Sbjct: 172441 ccaaatttgaaataaataaa 172422

>emb|AL359642.12| Human DNA sequence from clone RP11-507F17 on chromosome 9 Contains a
              kertain pseudogene, complete sequence
          Length = 122613

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    caaatttgaaataaataaaa 150
              ||||||||||||||||||||
Sbjct: 102198 caaatttgaaataaataaaa 102179

>emb|AL133353.6| Human DNA sequence from clone RP11-483F11 on chromosome 10 Contains
            the gene for lysosomal apyrase-like protein 1 (LALP1),
            the COX15 gene for COX15 homolog, cytochrome c oxidase
            assembly protein (yeast), the gene for CGI-32 protein
            (CGI-32), the 5' end of the ABCC2 gene for ATP-binding
            cassette, sub-family C (CFTR/MRP), member 2, an estrogen
            receptor binding site associated antigen 9 (EBAG9)
            pseudogene, a novel pseudogene, a novel gene and two CpG
            islands, complete sequence
          Length = 159204

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  agaaaacagaaatcgaagac 295
            ||||||||||||||||||||
Sbjct: 7542 agaaaacagaaatcgaagac 7523

>emb|BX120006.15| Zebrafish DNA sequence from clone DKEYP-21H4 in linkage group 3,
             complete sequence
          Length = 196854

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   caaatttgaaataaataaaa 150
             ||||||||||||||||||||
Sbjct: 41989 caaatttgaaataaataaaa 41970

>gb|AC097067.3| Homo sapiens BAC clone RP11-558N14 from 4, complete sequence
          Length = 136500

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 139   aaataaataaaaggggaaccacaa 162
             ||||||||||||||| ||||||||
Sbjct: 93938 aaataaataaaagggtaaccacaa 93961

>gb|AC162927.3| Mus musculus BAC clone RP23-269E12 from chromosome 9, complete sequence
          Length = 213948

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    gccactggtaactctcccaa 193
              ||||||||||||||||||||
Sbjct: 196827 gccactggtaactctcccaa 196846

>gb|AC147908.2| Xenopus tropicalis clone CH216-7L4, complete sequence
          Length = 183527

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   ttgaaataaataaaagggga 155
             ||||||||||||||||||||
Sbjct: 27693 ttgaaataaataaaagggga 27712

>gb|AC019144.9| Homo sapiens BAC clone RP11-733L22 from 2, complete sequence
          Length = 146004

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     agattaaacagtcacttcca 66
              ||||||||||||||||||||
Sbjct: 125818 agattaaacagtcacttcca 125837

>gb|L07553.1|HUMTRAMINS Human intragenic minisatellite
          Length = 467

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 caaatttgaaataaataaaa 150
           ||||||||||||||||||||
Sbjct: 195 caaatttgaaataaataaaa 176

>gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complete sequence
          Length = 152251

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   atacagccatttcaatttta 129
             ||||||||||||||||||||
Sbjct: 95650 atacagccatttcaatttta 95631

>gb|AC008011.11|AC008011 Homo sapiens 12p13 BAC RP11-993B23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 157267

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   caaatttgaaataaataaaa 150
             ||||||||||||||||||||
Sbjct: 34813 caaatttgaaataaataaaa 34794

>gb|AC147209.2| Xenopus tropicalis clone CH216-50L16, complete sequence
          Length = 176731

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   ttgaaataaataaaagggga 155
             ||||||||||||||||||||
Sbjct: 19584 ttgaaataaataaaagggga 19603

>emb|CR855387.11| Zebrafish DNA sequence from clone DKEY-282H22 in linkage group 3,
             complete sequence
          Length = 106466

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   caaatttgaaataaataaaa 150
             ||||||||||||||||||||
Sbjct: 64293 caaatttgaaataaataaaa 64274

>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome
          Length = 1664970

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     aaggataggacagcaagttg 105
              ||||||||||||||||||||
Sbjct: 948682 aaggataggacagcaagttg 948663

>emb|AL929124.13| Zebrafish DNA sequence from clone CH211-128D23, complete sequence
          Length = 165243

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   caaatttgaaataaataaaa 150
             ||||||||||||||||||||
Sbjct: 49094 caaatttgaaataaataaaa 49113

>emb|AL929446.5| Mouse DNA sequence from clone RP23-177M10 on chromosome 11, complete
             sequence
          Length = 118812

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 291   aagacgcatcgttcacatcacaac 314
             ||||||||| ||||||||||||||
Sbjct: 10418 aagacgcatagttcacatcacaac 10395

>gb|U23074.1|PTU23074 Pan troglodytes repeat sequence in the parathyroid hormone-related
           peptide gene
          Length = 182

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 caaatttgaaataaataaaa 150
           ||||||||||||||||||||
Sbjct: 151 caaatttgaaataaataaaa 132

>gb|U23075.1|GGU23075 Gorilla gorilla repeat sequence in the parathyroid hormone-related
           peptide gene
          Length = 170

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 caaatttgaaataaataaaa 150
           ||||||||||||||||||||
Sbjct: 139 caaatttgaaataaataaaa 120

>emb|AL611982.26| Mouse DNA sequence from clone RP23-348F1 on chromosome 4, complete
              sequence
          Length = 171559

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    aaatttgaaataaataaaag 151
              ||||||||||||||||||||
Sbjct: 124083 aaatttgaaataaataaaag 124102

>emb|AJ287905.1|DCE287905 Dictyota cervicornis chloroplast rbcL gene, spacer sequence,
           OdC713b
          Length = 160

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 123 aattttaccaaatttgaaataaataaaa 150
           |||||||| |||||| ||||||||||||
Sbjct: 79  aattttactaaatttaaaataaataaaa 52

>emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chromosome 2, complete
             sequence
          Length = 100090

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 60    acttccacacattacccatgttaa 83
             ||||||||||||| ||||||||||
Sbjct: 86206 acttccacacattccccatgttaa 86229


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,727,057
Number of Sequences: 3902068
Number of extensions: 5727057
Number of successful extensions: 97947
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97871
Number of HSP's gapped (non-prelim): 76
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)