>gb|AC026791.4|AC026791 Homo sapiens chromosome 5 clone CTD-2265D9, complete sequence
          Length = 154318

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 162   tcctcttcttttctcatcattttctttg 189
             |||| |||||||||||||||||||||||
Sbjct: 21122 tccttttcttttctcatcattttctttg 21095

>gb|AC145952.3| Pan troglodytes BAC clone RP43-18D16 from 7, complete sequence
          Length = 160354

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 169   cttttctcatcattttctttgat 191
             |||||||||||||||||||||||
Sbjct: 64635 cttttctcatcattttctttgat 64613

>gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, complete sequence
          Length = 217989

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 164    ctcttcttttctcatcattttct 186
              |||||||||||||||||||||||
Sbjct: 163429 ctcttcttttctcatcattttct 163451

>gb|AC113010.10| Mus musculus chromosome 18, clone RP23-172F6, complete sequence
          Length = 246921

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 164   ctcttcttttctcatcattttct 186
             |||||||||||||||||||||||
Sbjct: 66466 ctcttcttttctcatcattttct 66488

>ref|XM_462832.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3111

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 313  ttaactgcctcccttctgctt 333
            |||||||||||||||||||||
Sbjct: 3111 ttaactgcctcccttctgctt 3091

>gb|AF212132.1| Bombyx mandarina mariner transposon Bmamar2 transposase
          pseudogene, partial sequence
          Length = 458

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 26 gtcggtaataaagcatcacaattga 50
          ||||||||||||| |||||||||||
Sbjct: 54 gtcggtaataaagaatcacaattga 30

>gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, complete sequence
          Length = 214250

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 179    cattttctttgatcttttgaa 199
              |||||||||||||||||||||
Sbjct: 161618 cattttctttgatcttttgaa 161598

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 313      ttaactgcctcccttctgctt 333
                |||||||||||||||||||||
Sbjct: 10020837 ttaactgcctcccttctgctt 10020857

>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F09
          Length = 132713

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 313    ttaactgcctcccttctgctt 333
              |||||||||||||||||||||
Sbjct: 101119 ttaactgcctcccttctgctt 101139

>dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0021A04
          Length = 50487

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 313   ttaactgcctcccttctgctt 333
             |||||||||||||||||||||
Sbjct: 48394 ttaactgcctcccttctgctt 48414

>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0036E02
          Length = 145931

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 313    ttaactgcctcccttctgctt 333
              |||||||||||||||||||||
Sbjct: 115330 ttaactgcctcccttctgctt 115350

>ref|NM_001016394.2| Xenopus tropicalis hypothetical protein LOC549148 (LOC549148), mRNA
          Length = 1594

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cttttctcatcattttcttt 188
           ||||||||||||||||||||
Sbjct: 119 cttttctcatcattttcttt 100

>gb|AC147885.2| Xenopus tropicalis clone CH216-12C9, complete sequence
          Length = 222162

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    cttttctcatcattttcttt 188
              ||||||||||||||||||||
Sbjct: 115684 cttttctcatcattttcttt 115703

>emb|X04658.1|CERVDNA Carnation etched ring virus (CERV) DNA
          Length = 7932

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   aataaaaacttcacccattt 89
            ||||||||||||||||||||
Sbjct: 5156 aataaaaacttcacccattt 5175

>emb|AJ853858.1| Carnation etched ring virus, complete genome, Indian isolate
          Length = 7924

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   aataaaaacttcacccattt 89
            ||||||||||||||||||||
Sbjct: 5147 aataaaaacttcacccattt 5166

>gb|AC105204.5| Homo sapiens chromosome 15, clone RP11-1087J2, complete sequence
          Length = 210658

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   ttcttttctcatcattttct 186
             ||||||||||||||||||||
Sbjct: 65993 ttcttttctcatcattttct 66012

>gb|AC112724.3| Homo sapiens BAC clone RP11-811L19 from 4, complete sequence
          Length = 42210

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   tcttcttttctcatcatttt 184
             ||||||||||||||||||||
Sbjct: 23110 tcttcttttctcatcatttt 23091

>gb|AC090259.5| Homo sapiens chromosome 15, clone RP11-424E9, complete sequence
          Length = 143479

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     aaagcatcacaattgatgta 54
              ||||||||||||||||||||
Sbjct: 126939 aaagcatcacaattgatgta 126958

>gb|AC100825.2| Homo sapiens chromosome 15, clone RP11-1152M12, complete sequence
          Length = 127680

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aaagcatcacaattgatgta 54
             ||||||||||||||||||||
Sbjct: 45044 aaagcatcacaattgatgta 45025

>gb|AC079208.4| Homo sapiens chromosome 15, clone RP11-1149K15, complete sequence
          Length = 168252

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   ttcttttctcatcattttct 186
             ||||||||||||||||||||
Sbjct: 34307 ttcttttctcatcattttct 34288

>ref|XM_694569.1| PREDICTED: Danio rerio similar to egf-like module-containing
           mucin-like receptor 3 isoform a (LOC571015), mRNA
          Length = 2205

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 attaactgcctcccttctgc 331
           ||||||||||||||||||||
Sbjct: 183 attaactgcctcccttctgc 164

>gb|AC013551.10| Homo sapiens chromosome 15, clone RP11-133P13, complete sequence
          Length = 153823

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   ttcttttctcatcattttct 186
             ||||||||||||||||||||
Sbjct: 30254 ttcttttctcatcattttct 30273

>gb|AC016370.17|AC016370 Homo sapiens chromosome 15 clone RP11-424E9, complete sequence
          Length = 162773

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     aaagcatcacaattgatgta 54
              ||||||||||||||||||||
Sbjct: 146233 aaagcatcacaattgatgta 146252

>gb|AC150280.2| Pan troglodytes BAC clone CH251-20M5 from chromosome 7, complete
             sequence
          Length = 191966

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   ttttctcatcattttctttg 189
             ||||||||||||||||||||
Sbjct: 80407 ttttctcatcattttctttg 80388

>gb|AC147873.3| Monodelphis domestica clone VMRC6-582D4, complete sequence
          Length = 165359

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 166   cttcttttctcatcattttctttg 189
             ||||| ||||||||||||||||||
Sbjct: 54653 cttctattctcatcattttctttg 54676

>emb|CR761165.2| Xenopus tropicalis finished cDNA, clone TEgg054k06
          Length = 1594

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 cttttctcatcattttcttt 188
           ||||||||||||||||||||
Sbjct: 119 cttttctcatcattttcttt 100

>gb|AC115876.18| Mus musculus chromosome 1, clone RP24-356G6, complete sequence
          Length = 163698

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  ttctcatcattttctttgat 191
            ||||||||||||||||||||
Sbjct: 6082 ttctcatcattttctttgat 6101

>gb|AC125525.3| Mus musculus BAC clone RP24-395H10 from 1, complete sequence
          Length = 195904

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   ttctcatcattttctttgat 191
             ||||||||||||||||||||
Sbjct: 12907 ttctcatcattttctttgat 12888

>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 166    cttcttttctcatcattttctttg 189
              ||||| ||||||||||||||||||
Sbjct: 883826 cttctattctcatcattttctttg 883849

>emb|AL670035.15| Mouse DNA sequence from clone RP23-295C20 on chromosome 4, complete
             sequence
          Length = 201142

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 165   tcttcttttctcatcattttcttt 188
             ||||||||||| ||||||||||||
Sbjct: 47129 tcttcttttcttatcattttcttt 47106

>dbj|AP001577.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB611H5
          Length = 144828

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    ttcacccatttatcaagaaa 98
             ||||||||||||||||||||
Sbjct: 43968 ttcacccatttatcaagaaa 43949


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,928,798
Number of Sequences: 3902068
Number of extensions: 3928798
Number of successful extensions: 110699
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110594
Number of HSP's gapped (non-prelim): 105
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)