ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl38f02 |
|---|---|
| Clone Library Name | barley_pub |
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 69.7 bits (169), Expect = 2e-12 Identities = 34/80 (42%), Positives = 49/80 (61%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +G+R D WT+ +A +A F KL + E + RN D++LRNRNGPV++PYT+L Sbjct: 784 EVYLGQR-DNPNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVL 842 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P + GIPNSI++ Sbjct: 843 LPTCEDEGLTFRGIPNSISI 862
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 67.4 bits (163), Expect = 8e-12 Identities = 37/80 (46%), Positives = 51/80 (63%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +GER D WTS++RA +A +F KL + + + +RN D LRNR+GPVE+PYTLL Sbjct: 784 ELYLGER-DNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLL 842 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P + GIPNSI++ Sbjct: 843 YP-SSKEGLTFRGIPNSISI 861
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 65.9 bits (159), Expect = 2e-11 Identities = 34/80 (42%), Positives = 51/80 (63%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +GER +T WT++++A +A F +KL + + RN+D +LRNR GPV++PYTLL Sbjct: 787 EIYLGER-ETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLL 845 Query: 169 TPRADPTAPHVGGIPNSIAV 110 R+ GIPNSI++ Sbjct: 846 -HRSSEEGLTFKGIPNSISI 864
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 64.3 bits (155), Expect = 7e-11 Identities = 36/80 (45%), Positives = 47/80 (58%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +GER D WTS+ RA +A F KL + + +RN D LRNR GPV++PYTLL Sbjct: 780 EVYLGER-DNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLL 838 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P + GIPNSI++ Sbjct: 839 LP-SSKEGLTFRGIPNSISI 857
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 63.9 bits (154), Expect = 9e-11 Identities = 33/80 (41%), Positives = 50/80 (62%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +G+R D WTS+ +A +A +F KL + E + ++N D +L NR GPV++PYTLL Sbjct: 789 EVYLGQR-DNPHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLL 847 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P ++ GIPNSI++ Sbjct: 848 HPNSEGLT--CRGIPNSISI 865
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 63.9 bits (154), Expect = 9e-11 Identities = 33/80 (41%), Positives = 49/80 (61%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +GER + + WT++ +A F KL + E + +RN D +LRNR GPV++PYTLL Sbjct: 788 EQYLGERIEGDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLL 847 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P ++ GIPNSI++ Sbjct: 848 YPSSEEGLT-CRGIPNSISI 866
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 63.5 bits (153), Expect = 1e-10 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 6/86 (6%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +G+R DT WTS+ +A A F ++L + +K N ++ L+NRNGPV++PY LL Sbjct: 793 EVYLGQR-DTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLL 851 Query: 169 TPRADPTAPHVG------GIPNSIAV 110 P G GIPNSI++ Sbjct: 852 YPNTSDVTKEKGQGLTAMGIPNSISI 877
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 61.6 bits (148), Expect = 4e-10 Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 5/85 (5%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +G+R DT WTS+ RA +A F+ +L + V N D L+NRNGP E PY LL Sbjct: 783 EVYLGQR-DTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLL 841 Query: 169 TPR-ADPTAPHVG----GIPNSIAV 110 P +D T G GIPNSI++ Sbjct: 842 YPNTSDVTGAAAGITAKGIPNSISI 866
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 60.8 bits (146), Expect = 7e-10 Identities = 30/77 (38%), Positives = 47/77 (61%) Frame = -1 Query: 340 MGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLLTPR 161 +G+R + WTS+ +A F KL+ + + + ++N D TLRNR GP ++PYTLL P Sbjct: 778 LGQRDGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS 837 Query: 160 ADPTAPHVGGIPNSIAV 110 ++ GIPNSI++ Sbjct: 838 SEEGLT-FRGIPNSISI 853
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 60.1 bits (144), Expect = 1e-09 Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLR-NRNGPVEVPYTL 173 E +G+R D WTS+ +A +A +F KL + E + +RN D +L+ NR GPV++PYTL Sbjct: 761 EVYLGQR-DNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTL 819 Query: 172 LTPRADPTAPHVGGIPNSIAV 110 L P ++ GIPNSI++ Sbjct: 820 LYPSSEEGLT-FRGIPNSISI 839
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 59.7 bits (143), Expect = 2e-09 Identities = 32/80 (40%), Positives = 46/80 (57%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +GERPD E WT++ A A EF A + E +++RNAD + RNR G +PY L+ Sbjct: 822 EEYLGERPD-EAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELM 880 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P + P G+PNS+ + Sbjct: 881 APSSGPGIT-CRGVPNSVTI 899
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 59.3 bits (142), Expect = 2e-09 Identities = 30/80 (37%), Positives = 51/80 (63%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +G+R D++ W +E+ A +A +F K+ + + + +RN D TL+NR G V++PYTLL Sbjct: 782 EVYLGQR-DSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLL 840 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P ++ GIPNS+++ Sbjct: 841 FPSSEGGVTG-RGIPNSVSI 859
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 58.2 bits (139), Expect = 5e-09 Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +G+R DT WTS+ +A +A F A+L + V N D +NR GP PYTLL Sbjct: 787 EVYLGQR-DTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLL 845 Query: 169 TP-----RADPTAPHVGGIPNSIAV 110 P + D GIPNSI++ Sbjct: 846 YPNTSDLKGDAAGLSARGIPNSISI 870
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 56.6 bits (135), Expect = 1e-08 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 8/88 (9%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +G+R DT WTS+ +A + F+ +L + V N D L+NRNGP + PY LL Sbjct: 779 ELYLGQR-DTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLL 837 Query: 169 TPRADPTAPHVG--------GIPNSIAV 110 P T+ H G GIPNSI++ Sbjct: 838 YPN---TSDHKGAAAGLTAKGIPNSISI 862
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 56.6 bits (135), Expect = 1e-08 Identities = 26/65 (40%), Positives = 39/65 (60%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +GER + WTS+ +A F KL + + + ++N D TLRNR GP ++PYTLL Sbjct: 669 EIYLGERDGGDHWTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLL 728 Query: 169 TPRAD 155 P ++ Sbjct: 729 YPSSE 733
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 55.1 bits (131), Expect = 4e-08 Identities = 30/80 (37%), Positives = 44/80 (55%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +G+R E WT ++ A F KL + + + +RN D L NR+GPV PYTLL Sbjct: 784 EIYLGQRESPE-WTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLL 842 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P ++ GIPNS+++ Sbjct: 843 FPTSEGGLTG-KGIPNSVSI 861
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 54.7 bits (130), Expect = 5e-08 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 5/85 (5%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +G+R DT WTS+ +A +A F+ +L + V N D L+NR GP PYTL+ Sbjct: 780 EIYLGQR-DTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLM 838 Query: 169 TPR-ADPTAPHVG----GIPNSIAV 110 P +D G GIPNSI++ Sbjct: 839 FPNTSDNKGAAEGITARGIPNSISI 863
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 54.7 bits (130), Expect = 5e-08 Identities = 30/80 (37%), Positives = 47/80 (58%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +G+R + WTS+ +A +A +F KL + + +N D +L +R GPV++PYTLL Sbjct: 787 EVYLGQR-ENPHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLL 845 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P + GIPNSI++ Sbjct: 846 HP-SSKEGLTFRGIPNSISI 864
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 53.5 bits (127), Expect = 1e-07 Identities = 29/80 (36%), Positives = 43/80 (53%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +G+R E WT ++ A F KL + + + +RN + L NR GPV PYTLL Sbjct: 783 EIYLGQRESPE-WTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLL 841 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P ++ GIPNS+++ Sbjct: 842 FPTSEGGLTG-KGIPNSVSI 860
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 49.3 bits (116), Expect = 2e-06 Identities = 27/80 (33%), Positives = 43/80 (53%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E +G+R D+ WT ++ A F L + + N+ + +NR+GPV VPYTLL Sbjct: 782 EVYLGQR-DSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLL 840 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P ++ GIPNS+++ Sbjct: 841 FPTSEEGLTG-KGIPNSVSI 859
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 48.9 bits (115), Expect = 3e-06 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 2/84 (2%) Frame = -1 Query: 355 PGEPLMGERPDTER--WTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVP 182 P E +GE D WT+++ A A F A + E +++RNAD +NR G +P Sbjct: 836 PDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLP 895 Query: 181 YTLLTPRADPTAPHVGGIPNSIAV 110 Y LL P + P G+PNSI++ Sbjct: 896 YELLAP-SSPPGVTCRGVPNSISI 918
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 44.7 bits (104), Expect = 5e-05 Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 4/72 (5%) Frame = -1 Query: 313 WTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLLTP----RADPTA 146 W + KA F K+ +AE V++ N D + RNR+G VPY LL P D Sbjct: 861 WQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKT 920 Query: 145 PHVGGIPNSIAV 110 GIPNSI++ Sbjct: 921 VMEMGIPNSISI 932
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 43.9 bits (102), Expect = 9e-05 Identities = 28/80 (35%), Positives = 40/80 (50%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E L GE+ T W S+ A F A+L + + RN D L+NR G +PY L+ Sbjct: 865 EYLGGEQ--TRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLM 922 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P +D + GIPNS ++ Sbjct: 923 KPFSDAGVTGM-GIPNSTSI 941
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 43.5 bits (101), Expect = 1e-04 Identities = 28/82 (34%), Positives = 40/82 (48%) Frame = -1 Query: 355 PGEPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYT 176 P E MGE + W +E A +F+ +L + RN + +NR G VPY Sbjct: 817 PDEEYMGEYAEPA-WLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYE 875 Query: 175 LLTPRADPTAPHVGGIPNSIAV 110 LL P ++P GIPNSI++ Sbjct: 876 LLKPFSEPGVTG-RGIPNSISI 896
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 42.7 bits (99), Expect = 2e-04 Identities = 26/82 (31%), Positives = 41/82 (50%) Frame = -1 Query: 355 PGEPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYT 176 P E +GE+ + W +E A F KL + + +RN + TL+NR G V Y Sbjct: 817 PDEEYIGEQQEAS-WANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYE 875 Query: 175 LLTPRADPTAPHVGGIPNSIAV 110 LL P ++ + G+P SI++ Sbjct: 876 LLKPTSEHGVTGM-GVPYSISI 896
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 42.0 bits (97), Expect = 4e-04 Identities = 28/80 (35%), Positives = 40/80 (50%) Frame = -1 Query: 349 EPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLL 170 E L GE+ T W S+ A F A+L + + RN D L+NR G +PY L+ Sbjct: 848 EYLGGEQ--TRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLM 905 Query: 169 TPRADPTAPHVGGIPNSIAV 110 P +D + GIPNS ++ Sbjct: 906 KPFSDSGVTGM-GIPNSTSI 924
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 40.4 bits (93), Expect = 0.001 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Frame = -1 Query: 313 WTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLLTPR------ADP 152 WT + +A EF + E V + N D +NR+G VPY LL P DP Sbjct: 860 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDP 919 Query: 151 TAPHV---GGIPNSIAV 110 T + GIPNSI++ Sbjct: 920 TDEKMVMEMGIPNSISI 936
>NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (Retinoid| X receptor-interacting protein 13) (RIP13) Length = 2453 Score = 31.6 bits (70), Expect = 0.48 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Frame = -1 Query: 391 ALMALTMNPPVK---PGEPLMGERPDTERWTSEQR--AAKALLEFNAKLDAVAEAV 239 A A T PP P EP+ E +T RWT E+ A K L+E A+A+ V Sbjct: 598 AAAAATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMV 653
>NCOR1_HUMAN (O75376) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR)| Length = 2440 Score = 31.6 bits (70), Expect = 0.48 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Frame = -1 Query: 391 ALMALTMNPPVK---PGEPLMGERPDTERWTSEQR--AAKALLEFNAKLDAVAEAV 239 A A T PP P EP+ E +T RWT E+ A K L+E A+A+ V Sbjct: 599 AAAAATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMV 654
>BIOD_SALTI (Q8Z890) Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin| synthase) (DTB synthetase) (DTBS) Length = 228 Score = 31.2 bits (69), Expect = 0.63 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = -1 Query: 232 RNADTTLRNRNGPVEVPYTLLTPR--ADPTAPHVGGIPNSIAV 110 RN+D RN + PY+ + P A+PT+PH+ A+ Sbjct: 52 RNSDALALQRNSSLPQPYSAINPYTFAEPTSPHIASADEGRAI 94
>BIOD_SALTY (Q8ZQQ5) Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin| synthase) (DTB synthetase) (DTBS) Length = 228 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = -1 Query: 232 RNADTTLRNRNGPVEVPYTLLTPR--ADPTAPHV 137 RN+D RN + PY+ + P A+PT+PH+ Sbjct: 52 RNSDALALQRNSSLPQPYSAINPYTFAEPTSPHI 85
>NU2M_CAEEL (P24889) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 282 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +3 Query: 21 FYLFIYYFTKVILLISYY 74 FYLFIYYF ++LLIS + Sbjct: 172 FYLFIYYFVLMVLLISKF 189
>PURA_CAEEL (P91134) Probable adenylosuccinate synthetase (EC 6.3.4.4)| (IMP--aspartate ligase) (AdSS) (AMPSase) Length = 434 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%) Frame = +3 Query: 123 LGIPPTCGAVGSALGVSSVYGT--STGPF 203 +G+PPT AVG+ +GV Y T TGPF Sbjct: 260 IGVPPT--AVGNVIGVVKAYQTRVGTGPF 286
>Y658_HAEIN (P44808) Probable ABC transporter ATP-binding protein HI0658| Length = 638 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 3/85 (3%) Frame = -1 Query: 358 KPGEPLMGERPDTERWTSEQRAA---KALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVE 188 K E G+ D ++W SEQ + K + ++V +++ + LR + P+ Sbjct: 507 KKVEEFKGDLEDYQKWLSEQNSTSENKVSEKVGDNENSVQNRKEQKRREAELRQQTAPLR 566 Query: 187 VPYTLLTPRADPTAPHVGGIPNSIA 113 T L + + + + I N +A Sbjct: 567 KKITQLEEKMNKFSSELANIENQLA 591
>PRGH_SALTY (P41783) Protein prgH| Length = 392 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = -1 Query: 382 ALTMNPPVKPGEPLMGERPDTERWTSEQ 299 ++ +N P++ GE L+ RP++E W EQ Sbjct: 96 SVQLNTPIQVGELLILIRPESEPWVPEQ 123
>ANFB_CANFA (P16859) Natriuretic peptides B precursor [Contains: Gamma-brain| natriuretic peptide; Brain natriuretic peptide 34 (BNP-34); Brain natriuretic peptide 29 (BNP-29)] Length = 140 Score = 28.1 bits (61), Expect = 5.3 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 2/85 (2%) Frame = -1 Query: 388 LMALTMNPPVKPGEPLMGERPDTERW-TSEQRAAKALLEFNAKL-DAVAEAVKKRNADTT 215 L+ L ++P PL G P +E SE A+ E +L DAV+E ++ A Sbjct: 14 LLFLHLSPLGGRPHPLGGRSPASEASEASEASGLWAVQELLGRLKDAVSELQAEQLALEP 73 Query: 214 LRNRNGPVEVPYTLLTPRADPTAPH 140 L + P E P TPR APH Sbjct: 74 LHRSHSPAEAPEAGGTPRG-VLAPH 97
>Y048_MYCTU (P71705) Hypothetical protein Rv0048c/MT0054 precursor| Length = 289 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -1 Query: 313 WTSEQRAAKALLEFN----AKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLLTPRADPTA 146 W +AK++ + + +K DA R A TL + V+ Y ++ P DPT Sbjct: 196 WGDATSSAKSIADVSVVDLSKFDAKTAVGIMRGAPETLGLKQSDVKSMYLIVEPVKDPTT 255 Query: 145 P 143 P Sbjct: 256 P 256
>CLPB_DEIRA (Q9RVI3) Chaperone clpB| Length = 852 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 316 RWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTL 212 RW +E+ AL E KLDAV ++K D L Sbjct: 452 RWEAERGEVAALREKREKLDAVRTQIEKARRDYDL 486
>PAK1_YEAST (P38990) Serine/threonine-protein kinase PAK1 (EC 2.7.11.1)| Length = 1142 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 382 ALTMNPPV-KPGEPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRN 206 AL+ + P+ KPG ++ +R D ++ T+E ++EFN D K +N D L + Sbjct: 1001 ALSRSQPISKPGPLVLPKRLDQKKATTETSNLTDIVEFNGNND----HRKDKNFDKVLYS 1056 Query: 205 RN 200 R+ Sbjct: 1057 RD 1058
>NRFI_WOLSU (Q9S1E4) Protein nrfI| Length = 902 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +2 Query: 11 KSTFLFIYLLLYQGHTFDILLLHMILCRPTHY 106 K T+ +I +LLY L+LH+ L RP HY Sbjct: 805 KETWSYISILLYA------LILHLRLLRPKHY 830
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/71 (25%), Positives = 31/71 (43%) Frame = -1 Query: 340 MGERPDTERWTSEQRAAKALLEFNAKLDAVAEAVKKRNADTTLRNRNGPVEVPYTLLTPR 161 + ++ E W EQ A KAL E + ++A AV + T + + TP+ Sbjct: 187 LAKKARLEAWRKEQAAKKALEEARQRARSIASAVAPSSQRTESFSSSS---------TPQ 237 Query: 160 ADPTAPHVGGI 128 PT+ + G+ Sbjct: 238 TAPTSINAAGL 248
>NU2M_CAEBR (Q8HEC1) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 282 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +3 Query: 24 YLFIYYFTKVILLISYY 74 YLF+YYF +ILLIS + Sbjct: 173 YLFVYYFLLMILLISKF 189
>SYV_CAUCR (Q9A8N3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 906 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = -1 Query: 379 LTMNPPVKPGEPLMGERPDTERWTSEQRAAKALLEFNAKLDAVAEA 242 + + P KPG ++G P+T+ + R LL A+LDAV EA Sbjct: 770 MNVPPSAKPGLTIVGAGPETKARLARHR---DLLLTLARLDAVREA 812
>MALQ_SYNY3 (P72785) 4-alpha-glucanotransferase (EC 2.4.1.25) (Amylomaltase)| (Disproportionating enzyme) (D-enzyme) Length = 505 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = +3 Query: 84 YCVDRRTTQTAMLLGIPPTCGAVGSALGVSSVYGTST 194 +C+D T + AM+ G+PP + L + VY T Sbjct: 236 FCLDPETGEAAMMAGVPPDYFSATGQLWGNPVYDWET 272 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,173,519 Number of Sequences: 219361 Number of extensions: 600360 Number of successful extensions: 2175 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 2138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2174 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
