Clone Name | rbastl38e09 |
---|---|
Clone Library Name | barley_pub |
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 33.5 bits (75), Expect = 0.21 Identities = 13/30 (43%), Positives = 22/30 (73%) Frame = -1 Query: 413 EVKRMFQLALLCSKRQPSDRPTMHDVAHVL 324 EV+++ Q+ALLC++ P +RP M +V +L Sbjct: 534 EVEQLIQVALLCTQSSPMERPKMSEVVRML 563
>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)| Length = 980 Score = 32.3 bits (72), Expect = 0.48 Identities = 15/44 (34%), Positives = 27/44 (61%) Frame = -1 Query: 419 LGEVKRMFQLALLCSKRQPSDRPTMHDVAHVLSCLVCPEAPPKA 288 L V +F++A++C + + + RPTM +V H+L+ PPK+ Sbjct: 936 LTSVIHVFKIAMMCVEEEAAARPTMREVVHMLT------NPPKS 973
>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC| 2.7.11.1) Length = 423 Score = 30.8 bits (68), Expect = 1.4 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = -1 Query: 392 LALLCSKRQPSDRPTMHDVAHVLSCLVCPEAPPKAGSPQSSTAPSY 255 ++ +C + QP+ RP + DV L+ L + P + S S PS+ Sbjct: 355 ISAMCVQEQPTMRPVVSDVVLALNFLASSKYDPNSPSSSSGKNPSF 400
>THYG_RAT (P06882) Thyroglobulin precursor| Length = 2768 Score = 30.0 bits (66), Expect = 2.4 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +1 Query: 268 VDDWGDPAFGGASGQTRQLRTCATSCIVGRSDG 366 VD WG+ G ++ Q+ C TSC + R++G Sbjct: 1053 VDGWGELIPGSLMARSSQMPQCPTSCELSRANG 1085
>SMAD6_CHICK (Q9W734) Mothers against decapentaplegic homolog 6 (SMAD 6)| (Mothers against DPP homolog 6) (Smad6) Length = 431 Score = 29.6 bits (65), Expect = 3.1 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = -3 Query: 327 PQLPGLPRSAPEGGVAPV-VHGPELRERVCQPERRQRPVLCQLVERVRRGAL 175 P+LP P P GG +P G E R R+ ER + V L++R++ +L Sbjct: 71 PELPPPPPPPPPGGASPPGPGGGEARSRLVLLERELKAVTYALLKRLKERSL 122
>TIM21_GIBZE (Q4HZ95) Import inner membrane translocase subunit TIM21,| mitochondrial precursor Length = 229 Score = 29.3 bits (64), Expect = 4.0 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = +1 Query: 1 GQKRSIFTVNRASPQIQWPLLFFKTISENATLQSASW------MGLSGGQVYSVFCEIAS 162 G KR T + + W L + AT QS ++ + L+GG Y ++ ++ S Sbjct: 43 GPKRRAVTPFNDNGHVPWKQLSVAEKAARATQQSFNFGMILVGLMLTGGVGYFLWTDVFS 102 Query: 163 PNLRKSSASDALDELAQD 216 P+ + S+ + A+D++ D Sbjct: 103 PDSKISNFNRAVDKIRSD 120
>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein| kinase precursor (FLG22-induced receptor-like kinase 1) Length = 876 Score = 29.3 bits (64), Expect = 4.0 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -1 Query: 422 DLGEVKRMFQLALLCSKRQPSDRPTMHDVAHVLSCLV 312 D+G +M ++AL C++ + RPTM V L +V Sbjct: 810 DVGSAWKMSEIALACTEHTSAQRPTMSQVVMELKQIV 846
>3BP2_MOUSE (Q06649) SH3 domain-binding protein 2 (3BP-2)| Length = 559 Score = 29.3 bits (64), Expect = 4.0 Identities = 14/44 (31%), Positives = 19/44 (43%) Frame = -1 Query: 362 SDRPTMHDVAHVLSCLVCPEAPPKAGSPQSSTAPSYVNEYVSLR 231 SD P H + P PPK G P + +AP + + LR Sbjct: 218 SDLPRAHSFTSKSPSPLLPPPPPKRGLPDTGSAPEDAKDALGLR 261
>Y1688_HALSA (Q06847) Hypothetical protein Vng1688c| Length = 283 Score = 28.9 bits (63), Expect = 5.3 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +1 Query: 124 GGQVYSVFCEIASPNLRKSSASDALDELAQDRALAPLRLT 243 GG V +V A+P + A D DELA L PLRL+ Sbjct: 54 GGFVETVLRYAATPPYLRKEAFDTRDELAYAGVLPPLRLS 93
>KIN31_CAEEL (P34265) Probable tyrosine-protein kinase kin-31 (EC 2.7.10.2)| Length = 437 Score = 28.9 bits (63), Expect = 5.3 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -1 Query: 380 CSKRQPSDRPTMHDVAHVL 324 C P+DRPTM DVA +L Sbjct: 358 CCAENPNDRPTMSDVAQIL 376
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 28.5 bits (62), Expect = 6.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 404 RMFQLALLCSKRQPSDRPTMHDVAHVL 324 R+ Q+A+LC P+ RP M DV L Sbjct: 1163 RLLQIAMLCLAETPAKRPNMLDVLKAL 1189
>1433_FUCVE (Q39757) 14-3-3-like protein| Length = 251 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = +1 Query: 127 GQVYSVFCEIASPNLRKSSASDALD--ELAQDRALAPLRLTY 246 G + E S + RK+SASDALD +LA D A L T+ Sbjct: 123 GDYHRYLAEFQSADERKTSASDALDAYQLASDHANQDLPPTH 164
>EFTS_RICTY (Q68XV6) Elongation factor Ts (EF-Ts)| Length = 309 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +1 Query: 73 TISENATLQSASWMGLSGGQVYSVFCEIASPNLRKSSASDALDELAQDRA 222 TI EN TL+ + +S G + S P+L K S L+ A+D+A Sbjct: 132 TIGENLTLRRMDILEISNGAIGSYVHNEVVPHLGKISVLVGLESNAKDKA 181
>CNN_DROME (P54623) Centrosomin (Protein arrow)| Length = 1320 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -3 Query: 261 ELRERVCQPERRQRPVLCQLVERVRRGALPQVRRGDLTE 145 +L E++ Q + R V CQ+VE R Q+R D+T+ Sbjct: 898 QLEEQIAQKDERMLNVQCQMVELDNRYKQEQLRCLDITQ 936
>LCK_HUMAN (P06239) Proto-oncogene tyrosine-protein kinase LCK (EC 2.7.10.2)| (p56-LCK) (Lymphocyte cell-specific protein-tyrosine kinase) (LSK) (T cell-specific protein-tyrosine kinase) Length = 508 Score = 28.1 bits (61), Expect = 9.0 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -1 Query: 407 KRMFQLALLCSKRQPSDRPTMHDVAHVL 324 + ++QL LC K +P DRPT + VL Sbjct: 466 EELYQLMRLCWKERPEDRPTFDYLRSVL 493 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,188,119 Number of Sequences: 219361 Number of extensions: 925684 Number of successful extensions: 2938 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2844 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2938 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)