ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468076.1| Oryza sativa (japonica cultivar-group), mRNA 129 8e-27
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 129 8e-27
3dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic D... 129 8e-27
4dbj|AK060260.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 8e-27
5gb|AY106598.1| Zea mays PCO069596 mRNA sequence 100 7e-18
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
7dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
8dbj|AK073793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
9gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,... 84 4e-13
10gb|AC091607.11| Homo sapiens 3 BAC RP11-118D22 (Roswell Park Can... 42 1.4
11ref|XM_364545.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 5.7
12gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosom... 40 5.7
13emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, compl... 40 5.7
14gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell... 40 5.7
15gb|AF502150.1| Vibrio vulnificus cytochrome c-type biogenesis pr... 40 5.7
16ref|NM_140732.1| Drosophila melanogaster Organic anion transport... 40 5.7
17dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 5.7
18gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete ... 40 5.7
19gb|AC046131.35|AC046131 Homo sapiens 12 BAC RP11-847A19 (Roswell... 40 5.7
20ref|NM_072466.2| Caenorhabditis elegans F10G2.1 (F10G2.1) mRNA, ... 40 5.7
21gb|AC069114.4|AC069114 Homo sapiens chromosome 18, clone RP11-73... 40 5.7
22gb|AC027458.4|AC027458 Homo sapiens chromosome 18, clone RP11-72... 40 5.7
23gb|AC153587.2| Mus musculus 6 BAC RP23-361L1 (Roswell Park Cance... 40 5.7
24gb|U64836.1| Caenorhabditis elegans cosmid F10G2, complete sequence 40 5.7
25gb|AC003662.3| Homo sapiens chromosome 17, clone CTB-104N19, com... 40 5.7
26emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chr... 40 5.7
27emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 5.7
28gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62... 40 5.7
29dbj|AP001524.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.7
30dbj|AP000916.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 5.7
31gb|BT001436.1| Drosophila melanogaster GH24467 full insert cDNA 40 5.7 
>ref|XM_468076.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1688

 Score =  129 bits (65), Expect = 8e-27
 Identities = 125/145 (86%)
 Strand = Plus / Minus

                                                                        
Query: 134  tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 193
            ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| || ||||
Sbjct: 1346 tctactctgtgttctgtgatatcacctcgccgaacttcaggaagagctccgcatctgacg 1287

                                                                        
Query: 194  cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 253
            |||||||||| ||  ||||||| || | |||| ||||||  ||||| || |||||||| |
Sbjct: 1286 cgctcgacgaattttcacaggagagcgtgctgccgcctcgtaggctcacgtactcgttga 1227

                                     
Query: 254  cgtagctcggggccgtggacgactg 278
            | ||||||||  |||||||||||||
Sbjct: 1226 catagctcggaaccgtggacgactg 1202



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 78/88 (88%)
 Strand = Plus / Minus

                                                                        
Query: 335  cgacgtcgtgcatcgtcggccgatcggatggctgccgcttgctgcagaggagcgccagct 394
            |||| |||||||||||||| ||||| || ||||||| ||||||||| |||||||||| ||
Sbjct: 1133 cgacctcgtgcatcgtcggtcgatcagaaggctgcctcttgctgcaaaggagcgccaact 1074

                                        
Query: 395  ggaacatcctcttgacctcgccgagatc 422
            |||||| | ||||||||||||| |||||
Sbjct: 1073 ggaacaccttcttgacctcgccaagatc 1046
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  129 bits (65), Expect = 8e-27
 Identities = 125/145 (86%)
 Strand = Plus / Minus

                                                                            
Query: 134      tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 193
                ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| || ||||
Sbjct: 32907891 tctactctgtgttctgtgatatcacctcgccgaacttcaggaagagctccgcatctgacg 32907832

                                                                            
Query: 194      cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 253
                |||||||||| ||  ||||||| || | |||| ||||||  ||||| || |||||||| |
Sbjct: 32907831 cgctcgacgaattttcacaggagagcgtgctgccgcctcgtaggctcacgtactcgttga 32907772

                                         
Query: 254      cgtagctcggggccgtggacgactg 278
                | ||||||||  |||||||||||||
Sbjct: 32907771 catagctcggaaccgtggacgactg 32907747



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 78/88 (88%)
 Strand = Plus / Minus

                                                                            
Query: 335      cgacgtcgtgcatcgtcggccgatcggatggctgccgcttgctgcagaggagcgccagct 394
                |||| |||||||||||||| ||||| || ||||||| ||||||||| |||||||||| ||
Sbjct: 32907678 cgacctcgtgcatcgtcggtcgatcagaaggctgcctcttgctgcaaaggagcgccaact 32907619

                                            
Query: 395      ggaacatcctcttgacctcgccgagatc 422
                |||||| | ||||||||||||| |||||
Sbjct: 32907618 ggaacaccttcttgacctcgccaagatc 32907591
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>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1534_E09
          Length = 126209

 Score =  129 bits (65), Expect = 8e-27
 Identities = 125/145 (86%)
 Strand = Plus / Minus

                                                                         
Query: 134   tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 193
             ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| || ||||
Sbjct: 62632 tctactctgtgttctgtgatatcacctcgccgaacttcaggaagagctccgcatctgacg 62573

                                                                         
Query: 194   cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 253
             |||||||||| ||  ||||||| || | |||| ||||||  ||||| || |||||||| |
Sbjct: 62572 cgctcgacgaattttcacaggagagcgtgctgccgcctcgtaggctcacgtactcgttga 62513

                                      
Query: 254   cgtagctcggggccgtggacgactg 278
             | ||||||||  |||||||||||||
Sbjct: 62512 catagctcggaaccgtggacgactg 62488



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 78/88 (88%)
 Strand = Plus / Minus

                                                                         
Query: 335   cgacgtcgtgcatcgtcggccgatcggatggctgccgcttgctgcagaggagcgccagct 394
             |||| |||||||||||||| ||||| || ||||||| ||||||||| |||||||||| ||
Sbjct: 62419 cgacctcgtgcatcgtcggtcgatcagaaggctgcctcttgctgcaaaggagcgccaact 62360

                                         
Query: 395   ggaacatcctcttgacctcgccgagatc 422
             |||||| | ||||||||||||| |||||
Sbjct: 62359 ggaacaccttcttgacctcgccaagatc 62332
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>dbj|AK060260.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-H01, full
            insert sequence
          Length = 1688

 Score =  129 bits (65), Expect = 8e-27
 Identities = 125/145 (86%)
 Strand = Plus / Minus

                                                                        
Query: 134  tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 193
            ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| || ||||
Sbjct: 1346 tctactctgtgttctgtgatatcacctcgccgaacttcaggaagagctccgcatctgacg 1287

                                                                        
Query: 194  cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 253
            |||||||||| ||  ||||||| || | |||| ||||||  ||||| || |||||||| |
Sbjct: 1286 cgctcgacgaattttcacaggagagcgtgctgccgcctcgtaggctcacgtactcgttga 1227

                                     
Query: 254  cgtagctcggggccgtggacgactg 278
            | ||||||||  |||||||||||||
Sbjct: 1226 catagctcggaaccgtggacgactg 1202



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 78/88 (88%)
 Strand = Plus / Minus

                                                                        
Query: 335  cgacgtcgtgcatcgtcggccgatcggatggctgccgcttgctgcagaggagcgccagct 394
            |||| |||||||||||||| ||||| || ||||||| ||||||||| |||||||||| ||
Sbjct: 1133 cgacctcgtgcatcgtcggtcgatcagaaggctgcctcttgctgcaaaggagcgccaact 1074

                                        
Query: 395  ggaacatcctcttgacctcgccgagatc 422
            |||||| | ||||||||||||| |||||
Sbjct: 1073 ggaacaccttcttgacctcgccaagatc 1046
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>gb|AY106598.1| Zea mays PCO069596 mRNA sequence
          Length = 1273

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 77/86 (89%)
 Strand = Plus / Minus

                                                                        
Query: 340  tcgtgcatcgtcggccgatcggatggctgccgcttgctgcagaggagcgccagctggaac 399
            ||||||||||||||||| || || |||||||||||| |||||||||||||||||||||||
Sbjct: 1067 tcgtgcatcgtcggccggtccgagggctgccgcttggtgcagaggagcgccagctggaac 1008

                                      
Query: 400  atcctcttgacctcgccgagatcctt 425
            | | |||| |||||||| || |||||
Sbjct: 1007 agcttcttcacctcgcccaggtcctt 982



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 168  cttgaggaagagctccgcgtcggacgcgctcgacgagttggcacaggacagggcgctggc 227
            ||||||||| ||||| ||||| || | ||| ||||||||||| ||||| |||||||  | 
Sbjct: 1273 cttgaggaacagctcggcgtccgaggtgctggacgagttggcgcaggagagggcgccagt 1214

                                   
Query: 228  gcctctcaggctgacatactcgt 250
            ||| | ||||||||| |||||||
Sbjct: 1213 gccccgcaggctgacgtactcgt 1191
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                           
Query: 134     tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 193
               |||||||||||||||| || ||  ||||||| |||||||| || ||||| || ||||| |
Sbjct: 5255421 tctactctgtgttctgagaaatgacctcgccaaacttgagaaacagctcagcatcggaag 5255480

                                                                           
Query: 194     cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 253
                 | |||||||||||| ||||| ||  |||||| |||||| | ||||||||||||||| |
Sbjct: 5255481 tacacgacgagttggcgcaggagagcacgctggtgcctcttaagctgacatactcgttga 5255540

                          
Query: 254     cgtagctcggg 264
                ||||||||||
Sbjct: 5255541 tgtagctcggg 5255551



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                           
Query: 340     tcgtgcatcgtcggccgatcggatggctgccgcttgctgcagaggagcgccagctggaac 399
               |||||||| ||||||||||| ||||| || | |||| |||| ||||||||||||||||||
Sbjct: 5255639 tcgtgcattgtcggccgatccgatggttgtctcttggtgcaaaggagcgccagctggaac 5255698

                                         
Query: 400     atcctcttgacctcgccgagatcctt 425
               | | |||||||||| || ||||||||
Sbjct: 5255699 accttcttgacctcaccaagatcctt 5255724
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>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0016O19
          Length = 169120

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                          
Query: 134    tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 193
              |||||||||||||||| || ||  ||||||| |||||||| || ||||| || ||||| |
Sbjct: 122143 tctactctgtgttctgagaaatgacctcgccaaacttgagaaacagctcagcatcggaag 122202

                                                                          
Query: 194    cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 253
                | |||||||||||| ||||| ||  |||||| |||||| | ||||||||||||||| |
Sbjct: 122203 tacacgacgagttggcgcaggagagcacgctggtgcctcttaagctgacatactcgttga 122262

                         
Query: 254    cgtagctcggg 264
               ||||||||||
Sbjct: 122263 tgtagctcggg 122273



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                          
Query: 340    tcgtgcatcgtcggccgatcggatggctgccgcttgctgcagaggagcgccagctggaac 399
              |||||||| ||||||||||| ||||| || | |||| |||| ||||||||||||||||||
Sbjct: 122361 tcgtgcattgtcggccgatccgatggttgtctcttggtgcaaaggagcgccagctggaac 122420

                                        
Query: 400    atcctcttgacctcgccgagatcctt 425
              | | |||||||||| || ||||||||
Sbjct: 122421 accttcttgacctcaccaagatcctt 122446
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>dbj|AK073793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070P05, full
            insert sequence
          Length = 3673

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 134  tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 193
            |||||||||||||||| || ||  ||||||| |||||||| || ||||| || ||||| |
Sbjct: 3308 tctactctgtgttctgagaaatgacctcgccaaacttgagaaacagctcagcatcggaag 3249

                                                                        
Query: 194  cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 253
              | |||||||||||| ||||| ||  |||||| |||||| | ||||||||||||||| |
Sbjct: 3248 tacacgacgagttggcgcaggagagcacgctggtgcctcttaagctgacatactcgttga 3189

                       
Query: 254  cgtagctcggg 264
             ||||||||||
Sbjct: 3188 tgtagctcggg 3178



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/86 (87%)
 Strand = Plus / Minus

                                                                        
Query: 340  tcgtgcatcgtcggccgatcggatggctgccgcttgctgcagaggagcgccagctggaac 399
            |||||||| ||||||||||| ||||| || | |||| |||| ||||||||||||||||||
Sbjct: 3090 tcgtgcattgtcggccgatccgatggttgtctcttggtgcaaaggagcgccagctggaac 3031

                                      
Query: 400  atcctcttgacctcgccgagatcctt 425
            | | |||||||||| || ||||||||
Sbjct: 3030 accttcttgacctcaccaagatcctt 3005
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>gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,
            aminoalcoholphosphotransferase, putative
            growth-regulating factor 1, putative GAG-POL precursor,
            putative GAG-POL precursor, putative RIRE2 orf3, putative
            anthocyanin regulatory C1, putative protein T30F21.6,
            putative copia polyprotein, putative copia polyprotein,
            putative protein NP_196765.1, and gb protein genes,
            complete cds; and putative zinc finger protein gene,
            partial cds
          Length = 144159

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                        
Query: 340  tcgtgcatcgtcggccgatcggatggctgccgcttgctgcagaggagcgccagctggaac 399
            |||||||||||||| || || || || ||||||||| |||| ||||||||||||||||||
Sbjct: 1643 tcgtgcatcgtcggtcggtccgagggttgccgcttggtgcaaaggagcgccagctggaac 1702

                                      
Query: 400  atcctcttgacctcgccgagatcctt 425
            | | |||| ||||||||||| |||||
Sbjct: 1703 agcttcttcacctcgccgaggtcctt 1728



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                        
Query: 143  tgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacgcgctcgacg 202
            ||||||| ||||| |||||||||||||||||||| ||||| ||||| || | ||| | ||
Sbjct: 1434 tgttctgcgagatggcctcgccgaacttgaggaacagctcggcgtccgaggtgctggtcg 1493

                                                                      
Query: 203  agttggcacaggacagggcgctggcgcctctcaggctgacatactcgttcacgtagct 260
            ||||||| ||||| || |||| || ||| | ||||||||| |||||||| | ||||||
Sbjct: 1494 agttggcgcaggagagagcgccggtgccccgcaggctgacgtactcgttgatgtagct 1551
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>gb|AC091607.11| Homo sapiens 3 BAC RP11-118D22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 175447

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 40    ccccaaattcagtggcctctg 60
             |||||||||||||||||||||
Sbjct: 93878 ccccaaattcagtggcctctg 93898
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>ref|XM_364545.1| Magnaporthe grisea 70-15 hypothetical protein (MG09381.4) partial
           mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 ccgcgtcggacgcgctcgac 201
           ||||||||||||||||||||
Sbjct: 353 ccgcgtcggacgcgctcgac 372
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>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete sequence
          Length = 196646

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    gaggtcaagtctactctgtg 144
              ||||||||||||||||||||
Sbjct: 150225 gaggtcaagtctactctgtg 150244
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>emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, complete sequence
          Length = 198202

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      gccaaaagagaagcatattt 21
              ||||||||||||||||||||
Sbjct: 191884 gccaaaagagaagcatattt 191865
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>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   gaggagcgccagctggaaca 400
             ||||||||||||||||||||
Sbjct: 43345 gaggagcgccagctggaaca 43364
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>gb|AF502150.1| Vibrio vulnificus cytochrome c-type biogenesis protein CcmF (ccmF)
            gene, partial cds; thiol:disulfide interchange protein
            CcmG (ccmG) gene, complete cds; and cytochrome c-type
            biogenesis protein CcmH (ccmH) gene, partial cds
          Length = 3031

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 152  agatcgcctcgccgaacttgaggaagag 179
            |||||||||| | |||||||||||||||
Sbjct: 2229 agatcgcctctcagaacttgaggaagag 2256
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>ref|NM_140732.1| Drosophila melanogaster Organic anion transporting polypeptide 74D
            CG7571-RA (Oatp74D), mRNA
          Length = 3683

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 381  gaggagcgccagctggaaca 400
            ||||||||||||||||||||
Sbjct: 1580 gaggagcgccagctggaaca 1599
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 152     agatcgcctcgccgaacttgaggaagag 179
               |||||||||| | |||||||||||||||
Sbjct: 2483960 agatcgcctctcagaacttgaggaagag 2483933
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>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome
          Length = 859006

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    ctatttttcaaaacaattag 80
             ||||||||||||||||||||
Sbjct: 23989 ctatttttcaaaacaattag 23970
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>gb|AC046131.35|AC046131 Homo sapiens 12 BAC RP11-847A19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 111131

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    tggcctctgctatttttcaa 71
             ||||||||||||||||||||
Sbjct: 73777 tggcctctgctatttttcaa 73796
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>ref|NM_072466.2| Caenorhabditis elegans F10G2.1 (F10G2.1) mRNA, complete cds
          Length = 680

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  tttcaaaacaattagcgaaa 85
           ||||||||||||||||||||
Sbjct: 244 tttcaaaacaattagcgaaa 225
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>gb|AC069114.4|AC069114 Homo sapiens chromosome 18, clone RP11-736G13, complete sequence
          Length = 149144

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   gggcatctccccaaattcag 51
            ||||||||||||||||||||
Sbjct: 6802 gggcatctccccaaattcag 6821
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>gb|AC027458.4|AC027458 Homo sapiens chromosome 18, clone RP11-723G8, complete sequence
          Length = 182495

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    gggcatctccccaaattcag 51
             ||||||||||||||||||||
Sbjct: 80831 gggcatctccccaaattcag 80812
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>gb|AC153587.2| Mus musculus 6 BAC RP23-361L1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 232002

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     cagtggcctctgctattttt 68
              ||||||||||||||||||||
Sbjct: 133780 cagtggcctctgctattttt 133799
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>gb|U64836.1| Caenorhabditis elegans cosmid F10G2, complete sequence
          Length = 26539

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    tttcaaaacaattagcgaaa 85
             ||||||||||||||||||||
Sbjct: 17427 tttcaaaacaattagcgaaa 17408
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>gb|AC003662.3| Homo sapiens chromosome 17, clone CTB-104N19, complete sequence
          Length = 94576

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     gccaaaagagaagcatattt 21
             ||||||||||||||||||||
Sbjct: 34813 gccaaaagagaagcatattt 34794
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>emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chromosome 17, complete
              sequence
          Length = 177152

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      gccaaaagagaagcatattt 21
              ||||||||||||||||||||
Sbjct: 174097 gccaaaagagaagcatattt 174078
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>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 287     ccgccttcgggggcgcttct 306
               ||||||||||||||||||||
Sbjct: 1697382 ccgccttcgggggcgcttct 1697363
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>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the complete
             sequence
          Length = 290640

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   gaggagcgccagctggaaca 400
             ||||||||||||||||||||
Sbjct: 21813 gaggagcgccagctggaaca 21832
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>dbj|AP001524.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-702P11, complete
             sequence
          Length = 150847

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     gccaaaagagaagcatattt 21
             ||||||||||||||||||||
Sbjct: 32504 gccaaaagagaagcatattt 32523
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>dbj|AP000916.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-728D14, complete
              sequence
          Length = 192926

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      gccaaaagagaagcatattt 21
              ||||||||||||||||||||
Sbjct: 142989 gccaaaagagaagcatattt 143008
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>gb|BT001436.1| Drosophila melanogaster GH24467 full insert cDNA
          Length = 3699

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 381  gaggagcgccagctggaaca 400
            ||||||||||||||||||||
Sbjct: 1580 gaggagcgccagctggaaca 1599


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,113,325
Number of Sequences: 3902068
Number of extensions: 3113325
Number of successful extensions: 61648
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61550
Number of HSP's gapped (non-prelim): 98
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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