Clone Name	rbastl38e08
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BT016256.1| Zea mays clone Contig89 mRNA sequence	133	6e-28
2	ref|XM_466019.1| Oryza sativa (japonica cultivar-group), mRNA	119	8e-24
3	gb|AY320037.1| Oryza sativa (japonica cultivar-group) RNA bindin...	119	8e-24
4	gb|AY320036.1| Oryza sativa (japonica cultivar-group) RNA bindin...	119	8e-24
5	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	119	8e-24
6	dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D...	119	8e-24
7	dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic D...	119	8e-24
8	dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clon...	119	8e-24
9	dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clon...	119	8e-24
10	gb|AY112472.1| Zea mays CL152_1 mRNA sequence	62	2e-06
11	gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Ca...	44	0.40
12	emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 i...	44	0.40
13	gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, com...	42	1.6
14	gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, com...	42	1.6
15	dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026	42	1.6
16	emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence	42	1.6
17	emb|AL845262.3| Mouse DNA sequence from clone RP23-14N22 on chro...	42	1.6
18	emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chro...	42	1.6
19	ref|NM_102108.2| Arabidopsis thaliana unknown protein AT1G22610 ...	40	6.3
20	gb|AY016020.1| Gallus gallus alpha globin gene cluster, complete...	40	6.3
21	gb|BC061968.1| Rattus norvegicus ATPase, Na+/K+ transporting, al...	40	6.3
22	ref|XM_425255.1| PREDICTED: Gallus gallus similar to transmembra...	40	6.3
23	gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete se...	40	6.3
24	gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complet...	40	6.3
25	emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on ch...	40	6.3
26	gb|AY080693.1| Arabidopsis thaliana At1g22610 mRNA sequence	40	6.3
27	emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in...	40	6.3
28	emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k...	40	6.3
29	emb|X53234.1|RNNKAA1B Rat NKAA1 gene for Na+/K+ -ATPase alpha1 s...	40	6.3
30	gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, compl...	40	6.3
31	ref|NM_012504.1| Rattus norvegicus ATPase, Na+/K+ transporting, ...	40	6.3
32	gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome ...	40	6.3
33	gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12...	40	6.3
34	gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence	40	6.3
35	emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in...	40	6.3
36	emb|BX815537.1|CNS0AEKP Arabidopsis thaliana Full-length cDNA Co...	40	6.3
37	gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, comple...	40	6.3
38	gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, comple...	40	6.3
39	gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cance...	40	6.3
40	gb|AC172304.2| Gallus gallus BAC clone CH261-75C12 from chromoso...	40	6.3
41	emb|BX908726.21| Zebrafish DNA sequence from clone DKEY-74I2 in ...	40	6.3
42	emb|X05882.1|RNATPAR Rat mRNA for sodium/potassium-transporting ...	40	6.3
43	dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:R...	40	6.3
44	dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:...	40	6.3
45	gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, comple...	40	6.3
46	gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complet...	40	6.3
47	gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, co...	40	6.3
48	gb|M28647.1|RATNALPH1 Rattus norvegicus Na,K-ATPase alpha-1 subu...	40	6.3
49	gb|M14511.1|RATATPA1 Rat Na+,K+-ATPase alpha isoform catalytic s...	40	6.3

---

>gb|BT016256.1| Zea mays clone Contig89 mRNA sequence
          Length = 1657

 Score =  133 bits (67), Expect = 6e-28
 Identities = 113/127 (88%), Gaps = 1/127 (0%)
 Strand = Plus / Minus

                                                                        
Query: 335  tgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagcctttccttcttc 394
            ||||| |||||||| |||||||| ||||| |||||||| |  ||||||||||||||||| 
Sbjct: 1350 tgctcgtcctcgtccgattcaacatctccgtactgccaaatccgcagcctttccttcttt 1291

                                                                        
Query: 395  gccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttgtgt-ccat 453
            ||||| |||||||||||||||||||||| |||||| |||||||||||| | |||| ||||
Sbjct: 1290 gccttgtcctggaactgttccaggttctggagagccgtcttcctctccctagtgtcccat 1231

                   
Query: 454  ctcttgc 460
            |||||||
Sbjct: 1230 ctcttgc 1224

---

>ref|XM_466019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3549

 Score =  119 bits (60), Expect = 8e-24
 Identities = 102/116 (87%)
 Strand = Plus / Minus

                                                                        
Query: 327  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 386
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 3153 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 3094

                                                                    
Query: 387  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcc 442
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| ||||||
Sbjct: 3093 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctcc 3038



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 130  ttattgagcttaggggaaaaacaatgtat 158
            ||||| || ||||||||||||||||||||
Sbjct: 3443 ttattaagtttaggggaaaaacaatgtat 3415

---

>gb|AY320037.1| Oryza sativa (japonica cultivar-group) RNA binding protein Rp120
            gene, complete cds
          Length = 5478

 Score =  119 bits (60), Expect = 8e-24
 Identities = 102/116 (87%)
 Strand = Plus / Minus

                                                                        
Query: 327  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 386
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 5271 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 5212

                                                                    
Query: 387  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcc 442
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| ||||||
Sbjct: 5211 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctcc 5156

---

>gb|AY320036.1| Oryza sativa (japonica cultivar-group) RNA binding protein Rp120
            mRNA, complete cds
          Length = 2961

 Score =  119 bits (60), Expect = 8e-24
 Identities = 102/116 (87%)
 Strand = Plus / Minus

                                                                        
Query: 327  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 386
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 2932 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 2873

                                                                    
Query: 387  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcc 442
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| ||||||
Sbjct: 2872 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctcc 2817

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  119 bits (60), Expect = 8e-24
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                            
Query: 327      ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 386
                |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 19118661 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 19118720

                                                                        
Query: 387      ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcc 442
                ||||||| || |||||||||||||||||||| |||| |||||| | ||| ||||||
Sbjct: 19118721 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctcc 19118776



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 130      ttattgagcttaggggaaaaacaatgtat 158
                ||||| || ||||||||||||||||||||
Sbjct: 19118371 ttattaagtttaggggaaaaacaatgtat 19118399

---

>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0415B12
          Length = 157419

 Score =  119 bits (60), Expect = 8e-24
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                         
Query: 327   ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 386
             |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 16910 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 16969

                                                                     
Query: 387   ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcc 442
             ||||||| || |||||||||||||||||||| |||| |||||| | ||| ||||||
Sbjct: 16970 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctcc 17025



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 130   ttattgagcttaggggaaaaacaatgtat 158
             ||||| || ||||||||||||||||||||
Sbjct: 16620 ttattaagtttaggggaaaaacaatgtat 16648

---

>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score =  119 bits (60), Expect = 8e-24
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                          
Query: 327    ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 386
              |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 124182 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 124241

                                                                      
Query: 387    ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcc 442
              ||||||| || |||||||||||||||||||| |||| |||||| | ||| ||||||
Sbjct: 124242 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctcc 124297



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 130    ttattgagcttaggggaaaaacaatgtat 158
              ||||| || ||||||||||||||||||||
Sbjct: 123892 ttattaagtttaggggaaaaacaatgtat 123920

---

>dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J15, full
            insert sequence
          Length = 3547

 Score =  119 bits (60), Expect = 8e-24
 Identities = 102/116 (87%)
 Strand = Plus / Minus

                                                                        
Query: 327  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 386
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 3151 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 3092

                                                                    
Query: 387  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcc 442
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| ||||||
Sbjct: 3091 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctcc 3036



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 130  ttattgagcttaggggaaaaacaatgtat 158
            ||||| || ||||||||||||||||||||
Sbjct: 3441 ttattaagtttaggggaaaaacaatgtat 3413

---

>dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D08, full
            insert sequence
          Length = 1551

 Score =  119 bits (60), Expect = 8e-24
 Identities = 102/116 (87%)
 Strand = Plus / Minus

                                                                        
Query: 327  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 386
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 1169 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 1110

                                                                    
Query: 387  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcc 442
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| ||||||
Sbjct: 1109 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctcc 1054



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 130  ttattgagcttaggggaaaaacaatgtat 158
            ||||| || ||||||||||||||||||||
Sbjct: 1459 ttattaagtttaggggaaaaacaatgtat 1431

---

>gb|AY112472.1| Zea mays CL152_1 mRNA sequence
          Length = 1436

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/55 (90%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                  
Query: 407 aactgttccaggttctcgagagctgtcttcctctcctttgtgt-ccatctcttgc 460
           |||||||||||||||| |||||| |||||||||||| | |||| |||||||||||
Sbjct: 976 aactgttccaggttctggagagccgtcttcctctccctagtgtcccatctcttgc 922

---

>gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 117636

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 147   aaaacaatgtatatagttctct 168
             ||||||||||||||||||||||
Sbjct: 97578 aaaacaatgtatatagttctct 97599

---

>emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 in linkage group 13,
              complete sequence
          Length = 165993

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 211    ttcatataagctctcgactgagtttc 236
              |||||||| |||||||||||||||||
Sbjct: 151331 ttcatatatgctctcgactgagtttc 151306

---

>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence
          Length = 275646

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    ttattgagcttaggggaaaaa 150
              |||||||||||||||||||||
Sbjct: 246866 ttattgagcttaggggaaaaa 246886

---

>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 130   ttattgagcttaggggaaaaa 150
             |||||||||||||||||||||
Sbjct: 88447 ttattgagcttaggggaaaaa 88467

---

>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 445     tgtgtccatctcttgcccttt 465
               |||||||||||||||||||||
Sbjct: 1275888 tgtgtccatctcttgcccttt 1275908

---

>emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence
          Length = 168910

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 198    ttcttactaagttttcatata 218
              |||||||||||||||||||||
Sbjct: 141218 ttcttactaagttttcatata 141198

---

>emb|AL845262.3| Mouse DNA sequence from clone RP23-14N22 on chromosome 2, complete
             sequence
          Length = 207718

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 441   cctttgtgtccatctcttgcccttt 465
             |||| ||||||||||||||||||||
Sbjct: 27695 ccttggtgtccatctcttgcccttt 27719

---

>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete
              sequence
          Length = 195413

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 110    gtccacaaaggacacagacct 130
              |||||||||||||||||||||
Sbjct: 152418 gtccacaaaggacacagacct 152438

---

>ref|NM_102108.2| Arabidopsis thaliana unknown protein AT1G22610 mRNA, complete cds
          Length = 3295

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 338 tcttcctcgtcggattcaacgtctccat 365
           ||||| ||||||| ||||||||||||||
Sbjct: 755 tcttcttcgtcggcttcaacgtctccat 728

---

>gb|AY016020.1| Gallus gallus alpha globin gene cluster, complete sequence
          Length = 103190

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   tcctctcctttgtgtccatc 454
             ||||||||||||||||||||
Sbjct: 77869 tcctctcctttgtgtccatc 77888

---

>gb|BC061968.1| Rattus norvegicus ATPase, Na+/K+ transporting, alpha 1 polypeptide,
           mRNA (cDNA clone MGC:72546 IMAGE:5598014), complete cds
          Length = 3700

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 382 cctttccttcttcgccttct 401
           ||||||||||||||||||||
Sbjct: 338 cctttccttcttcgccttct 319

---

>ref|XM_425255.1| PREDICTED: Gallus gallus similar to transmembrane protein 6-like
            (LOC427681), mRNA
          Length = 2901

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  tcctctcctttgtgtccatc 454
            ||||||||||||||||||||
Sbjct: 2603 tcctctcctttgtgtccatc 2622

---

>gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete sequence
          Length = 51685

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 145   gaaaaacaatgtatatagttctct 168
             |||||||||| |||||||||||||
Sbjct: 28326 gaaaaacaatatatatagttctct 28303

---

>gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 157   atatagttctcttcttctaatggc 180
             |||| |||||||||||||||||||
Sbjct: 99542 atatggttctcttcttctaatggc 99565

---

>emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on chromosome 9 Contains the 3'
              end of a novel gene (FLJ25636) and the 5' end of a novel
              gene (FLJ20276), complete sequence
          Length = 162126

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 34     ttccaatcctgaatttaatttcca 57
              |||||||||||||||| |||||||
Sbjct: 145724 ttccaatcctgaatttcatttcca 145701

---

>gb|AY080693.1| Arabidopsis thaliana At1g22610 mRNA sequence
          Length = 1920

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 338 tcttcctcgtcggattcaacgtctccat 365
           ||||| ||||||| ||||||||||||||
Sbjct: 746 tcttcttcgtcggcttcaacgtctccat 719

---

>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete
              sequence
          Length = 185915

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    ataaatatagtctctctttc 200
              ||||||||||||||||||||
Sbjct: 181778 ataaatatagtctctctttc 181797

---

>emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k9, COMPLETE SEQUENCE
          Length = 123977

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 391   cttcgccttctcctggaactgttccaggttct 422
             |||| |||||||||||||||  ||||||||||
Sbjct: 51074 cttcaccttctcctggaactcctccaggttct 51105

---

>emb|X53234.1|RNNKAA1B Rat NKAA1 gene for Na+/K+ -ATPase alpha1 subunit exon 2
          Length = 1813

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 382  cctttccttcttcgccttct 401
            ||||||||||||||||||||
Sbjct: 1771 cctttccttcttcgccttct 1752

---

>gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, complete sequence
          Length = 125123

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   tgtatatagttctcttcttc 173
             ||||||||||||||||||||
Sbjct: 87138 tgtatatagttctcttcttc 87157

---

>ref|NM_012504.1| Rattus norvegicus ATPase, Na+/K+ transporting, alpha 1 polypeptide
           (Atp1a1), mRNA
          Length = 3636

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 382 cctttccttcttcgccttct 401
           ||||||||||||||||||||
Sbjct: 327 cctttccttcttcgccttct 308

---

>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14,
             complete sequence
          Length = 151836

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   aaaacaatgtatatagttct 166
             ||||||||||||||||||||
Sbjct: 34730 aaaacaatgtatatagttct 34711

---

>gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12K8 genomic sequence, complete
             sequence
          Length = 107200

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 338   tcttcctcgtcggattcaacgtctccat 365
             ||||| ||||||| ||||||||||||||
Sbjct: 12990 tcttcttcgtcggcttcaacgtctccat 13017

---

>gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence
          Length = 7342

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 157  atatagttctcttcttctaatggc 180
            |||| |||||||||||||||||||
Sbjct: 3933 atatggttctcttcttctaatggc 3910

---

>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5,
             complete sequence
          Length = 160041

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   ataaatatagtctctctttc 200
             ||||||||||||||||||||
Sbjct: 88307 ataaatatagtctctctttc 88326

---

>emb|BX815537.1|CNS0AEKP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS70ZB10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2808

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 338 tcttcctcgtcggattcaacgtctccat 365
           ||||| ||||||| ||||||||||||||
Sbjct: 687 tcttcttcgtcggcttcaacgtctccat 660

---

>gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, complete sequence
          Length = 111857

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   tcttctaatggcataaatat 188
             ||||||||||||||||||||
Sbjct: 84384 tcttctaatggcataaatat 84403

---

>gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, complete sequence
          Length = 149462

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   ccaaaactttcatatctaaa 265
             ||||||||||||||||||||
Sbjct: 29599 ccaaaactttcatatctaaa 29580

---

>gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 185470

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   gtgtccaaaactttcatatc 261
             ||||||||||||||||||||
Sbjct: 41312 gtgtccaaaactttcatatc 41293

---

>gb|AC172304.2| Gallus gallus BAC clone CH261-75C12 from chromosome ul, complete
             sequence
          Length = 227366

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   tcctctcctttgtgtccatc 454
             ||||||||||||||||||||
Sbjct: 62316 tcctctcctttgtgtccatc 62297

---

>emb|BX908726.21| Zebrafish DNA sequence from clone DKEY-74I2 in linkage group 22,
             complete sequence
          Length = 180599

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   gagctgtcttcctctccttt 445
             ||||||||||||||||||||
Sbjct: 92306 gagctgtcttcctctccttt 92287

---

>emb|X05882.1|RNATPAR Rat mRNA for sodium/potassium-transporting ATPase alpha-1 chain
           precursor (atp1a1 gene)
          Length = 3407

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 382 cctttccttcttcgccttct 401
           ||||||||||||||||||||
Sbjct: 104 cctttccttcttcgccttct 85

---

>dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-99C10, complete
              sequences
          Length = 175110

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    aaactttcatatctaaacca 268
              ||||||||||||||||||||
Sbjct: 139050 aaactttcatatctaaacca 139031

---

>dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-752D5, complete
             sequences
          Length = 170973

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   aaactttcatatctaaacca 268
             ||||||||||||||||||||
Sbjct: 31136 aaactttcatatctaaacca 31117

---

>gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, complete sequence
          Length = 182415

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   tttccttcttcgccttctcc 403
             ||||||||||||||||||||
Sbjct: 98222 tttccttcttcgccttctcc 98203

---

>gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complete sequence
          Length = 232568

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 157   atatagttctcttcttctaatggc 180
             |||| |||||||||||||||||||
Sbjct: 42584 atatggttctcttcttctaatggc 42607

---

>gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, complete sequence
          Length = 194167

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 157   atatagttctcttcttctaatggc 180
             |||| |||||||||||||||||||
Sbjct: 78320 atatggttctcttcttctaatggc 78343

---

>gb|M28647.1|RATNALPH1 Rattus norvegicus Na,K-ATPase alpha-1 subunit mRNA, complete cds
          Length = 3599

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 382 cctttccttcttcgccttct 401
           ||||||||||||||||||||
Sbjct: 350 cctttccttcttcgccttct 331

---

>gb|M14511.1|RATATPA1 Rat Na+,K+-ATPase alpha isoform catalytic subunit mRNA, complete
           cds
          Length = 3636

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 382 cctttccttcttcgccttct 401
           ||||||||||||||||||||
Sbjct: 327 cctttccttcttcgccttct 308


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,131,971
Number of Sequences: 3902068
Number of extensions: 5131971
Number of successful extensions: 94906
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94756
Number of HSP's gapped (non-prelim): 150
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---