Clone Name | rbastl38e06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RA51B_MOUSE (O35719) DNA repair protein RAD51 homolog 2 (R51H2) ... | 30 | 3.1 | 2 | ACSA_BRAJA (Q89WV5) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (A... | 29 | 6.8 |
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>RA51B_MOUSE (O35719) DNA repair protein RAD51 homolog 2 (R51H2) (RAD51-like| protein 1) Length = 350 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -3 Query: 375 STLVCALRQVDISLHAGVPDRSSSQYLGDPHCVPQHFSLL 256 ST +CAL D +LH GVP S ++ G P C F ++ Sbjct: 84 STTLCAL---DEALHGGVPCGSLTEITGPPGCGKTQFCIM 120
>ACSA_BRAJA (Q89WV5) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) Length = 648 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/49 (26%), Positives = 27/49 (55%) Frame = +1 Query: 55 PSYHSNPKFFDITQTVHSSHIFFTNGSPLRLTFRGGPVELKATNAMNLK 201 P+Y N +F+++ H + F+T + +R +GG +K T+ +L+ Sbjct: 331 PNYPDNSRFWNVIDK-HKVNTFYTAPTAIRALMQGGDEPVKKTSRASLR 378 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,874,265 Number of Sequences: 219361 Number of extensions: 1218112 Number of successful extensions: 2659 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2601 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2656 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)