ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MPRI_BOVIN (P08169) Cation-independent mannose-6-phosphate recep... 29 3.6

>MPRI_BOVIN (P08169) Cation-independent mannose-6-phosphate receptor precursor|
            (CI Man-6-P receptor) (CI-MPR) (M6PR) (Insulin-like
            growth factor 2 receptor) (Insulin-like growth factor II
            receptor) (IGF-II receptor) (300 kDa mannose 6-phosphate
            receptor)
          Length = 2499

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 233  PVFL*HDVDMSKAYPP*VVMDDRALQCIPHPLD*ELIDP 117
            P FL  D+D S          + AL C+P P+D ++ DP
Sbjct: 1060 PKFLHQDIDSSLGIRDTFFEFETALACVPSPVDCQVTDP 1098


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,312,366
Number of Sequences: 219361
Number of extensions: 700075
Number of successful extensions: 1473
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 80,573,946
effective HSP length: 64
effective length of database: 66,534,842
effective search space used: 1596836208
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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