Clone Name | rbastl38e04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... | 44 | 0.22 | 2 | gb|AC087893.15| Homo sapiens 12 BAC RP11-423G4 (Roswell Park Can... | 42 | 0.88 | 3 | gb|DQ289010.1| Trichoderma caribbaeum strain Dis 320c translatio... | 40 | 3.5 |
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>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13 Length = 85992 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 208 tccacatcatgtcacaaaaaca 229 |||||||||||||||||||||| Sbjct: 78692 tccacatcatgtcacaaaaaca 78671
>gb|AC087893.15| Homo sapiens 12 BAC RP11-423G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 207829 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 cctttgacatgtccacatcat 217 ||||||||||||||||||||| Sbjct: 104352 cctttgacatgtccacatcat 104332
>gb|DQ289010.1| Trichoderma caribbaeum strain Dis 320c translation elongation factor 1 alpha (tef1) gene, partial sequence Length = 509 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ctttgacatgtccacatcat 217 |||||||||||||||||||| Sbjct: 443 ctttgacatgtccacatcat 462 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,813,849 Number of Sequences: 3902068 Number of extensions: 1813849 Number of successful extensions: 30215 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 30212 Number of HSP's gapped (non-prelim): 3 length of query: 268 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 246 effective length of database: 17,147,199,772 effective search space: 4218211143912 effective search space used: 4218211143912 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)