ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF261107.1|AF261107 Hordeum vulgare sucrose-phosphate synthas... 329 2e-87
2gb|AF534907.1| Triticum aestivum sucrose-phosphate synthase 9 mR... 299 1e-78
3gb|BT009472.1| Triticum aestivum clone wr1.pk0028.h11:fis, full ... 299 1e-78
4ref|XM_464358.1| Oryza sativa (japonica cultivar-group), mRNA 70 2e-09
5ref|XM_506735.1| PREDICTED Oryza sativa (japonica cultivar-group... 70 2e-09
6ref|XM_506734.1| PREDICTED Oryza sativa (japonica cultivar-group... 70 2e-09
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 70 2e-09
8dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic D... 70 2e-09
9dbj|AK121486.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 2e-09
10dbj|AK065273.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 2e-09
11dbj|AK063433.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 2e-09
12dbj|AK098898.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 6e-07
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.034
14dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.034
15dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.034
16dbj|AK071732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.034
17gb|AY111176.1| Zea mays CL11730_1 mRNA sequence 44 0.13
18gb|AC110222.9| Mus musculus chromosome 3, clone RP24-211P23, com... 42 0.53
19gb|AC159975.4| Mus musculus chromosome 3, clone RP24-204F16, com... 42 0.53
20gb|AC111024.13| Mus musculus chromosome 17, clone RP23-103P1, co... 40 2.1
21gb|AC099035.2| Drosophila melanogaster clone BACR37H13, complete... 40 2.1
22emb|AL589796.7| Human DNA sequence from clone RP13-469O16 on chr... 40 2.1
23emb|AL136313.27| Human DNA sequence from clone RP4-551N11 on chr... 40 2.1
24gb|AC159976.4| Mus musculus chromosome 3, clone RP24-224M8, comp... 40 2.1
25gb|DQ114495.1| Buchnera aphidicola tryptophan plasmid pTrp-BTg, ... 40 2.1
26dbj|AK094561.1| Homo sapiens cDNA FLJ37242 fis, clone BRAMY2004335 40 2.1
27gb|AC079035.46| Homo sapiens 12 BAC RP11-863H1 (Roswell Park Can... 40 2.1
28tpg|BK003627.1| TPA: TPA_inf: Drosophila melanogaster HDC04208 (... 40 2.1
29dbj|AK035087.1| Mus musculus 12 days embryo embryonic body betwe... 40 2.1
30gb|AC008352.2|AC008352 Drosophila melanogaster, chromosome 2R, r... 40 2.1
31dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.1
32gb|AC110740.15| Mus musculus chromosome 8, clone RP24-421B13, co... 40 2.1
33gb|AC115021.15| Mus musculus chromosome 3, clone RP24-232N19, co... 40 2.1
34gb|AC007177.1|AC007177 Drosophila melanogaster, chromosome 2R, r... 40 2.1
35gb|AE003459.3| Drosophila melanogaster chromosome 2R, section 67... 40 2.1
36gb|AC004053.1|AC004053 Homo sapiens chromosome 4 clone B211A1 ma... 40 2.1
37gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.1
38emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494... 40 2.1
39emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa... 40 2.1
40emb|CT010580.7| Mouse DNA sequence from clone RP23-233G23 on chr... 40 2.1
41gb|AC122363.4| Mus musculus BAC clone RP23-437C1 from chromosome... 38 8.3
42gb|AC136363.2| Homo sapiens chromosome 17, clone RP11-18L18, com... 38 8.3
43gb|AF049895.3| Homo sapiens chromosome 8 multiple clones map q21... 38 8.3
44gb|AC111125.11| Mus musculus chromosome 9, clone RP23-331P8, com... 38 8.3
45gb|AC005153.2| Homo sapiens PAC clone RP4-537P9 from 7, complete... 38 8.3
46ref|XM_386141.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 38 8.3
47gb|AC122460.4| Mus musculus BAC clone RP24-283I1 from chromosome... 38 8.3
48gb|AC133654.4| Mus musculus BAC clone RP24-332N10 from chromosom... 38 8.3
49gb|AC124177.2| Mus musculus BAC clone RP23-193C10 from 3, comple... 38 8.3
50ref|XM_645245.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 38 8.3
51ref|XM_670132.1| Plasmodium berghei strain ANKA hypothetical pro... 38 8.3
52emb|AL360013.8| Human DNA sequence from clone RP11-103C3 on chro... 38 8.3
53emb|AL118496.22|HSJ136J15 Human DNA sequence from clone RP1-136J... 38 8.3
54emb|AL023773.1|HS406C18 Human DNA sequence from clone RP3-406C18... 38 8.3
55emb|BX248243.23| Zebrafish DNA sequence from clone CH211-225L7 i... 38 8.3
56emb|AL732516.6| Mouse DNA sequence from clone RP23-403H17 on chr... 38 8.3
57gb|AC158402.6| Mus musculus chromosome 1, clone RP24-328M23, com... 38 8.3
58gb|AC123903.2| Homo sapiens chromosome 3 clone RP11-182A24, comp... 38 8.3
59gb|AC093454.3| Drosophila melanogaster 3L BAC RP98-23K2 (Roswell... 38 8.3
60dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 38 8.3
61gb|AC149075.3| Danio rerio clone busm1-36i3, complete sequence 38 8.3
62gb|AC145871.4| Pan troglodytes BAC clone RP43-6N15 from chromoso... 38 8.3
63gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex B... 38 8.3
64gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex B... 38 8.3
65dbj|AK037071.1| Mus musculus adult female vagina cDNA, RIKEN ful... 38 8.3
66ref|XM_397430.2| PREDICTED: Apis mellifera similar to sensory ne... 38 8.3
67gb|AC156835.2| Mus musculus BAC clone RP23-322L4 from chromosome... 38 8.3
68gb|AC026457.8| Homo sapiens chromosome 16 clone RP11-105C20, com... 38 8.3
69gb|AC131274.9| Homo sapiens chromosome 17, clone RP11-285M22, co... 38 8.3
70emb|BX119959.7| Mouse DNA sequence from clone RP23-346N16 on chr... 38 8.3
71gb|AC004612.1|AC004612 Homo sapiens PAC clone RP1-318J7 from 8q2... 38 8.3
72emb|BX248515.4| Zebrafish DNA sequence from clone DKEY-177P2 in ... 38 8.3
73gb|AE003528.3| Drosophila melanogaster chromosome 3L, section 57... 38 8.3
74dbj|AP003397.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 38 8.3
75gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 38 8.3
76gb|AF069291.1|AF069291 Homo sapiens BAC clone 255A7 from 8q21 co... 38 8.3
77gb|AC132481.4| Mus musculus BAC clone RP23-14I14 from 17, comple... 38 8.3
78emb|AL732320.8| Mouse DNA sequence from clone RP23-140D16 on chr... 38 8.3 
>gb|AF261107.1|AF261107 Hordeum vulgare sucrose-phosphate synthase mRNA, partial cds
          Length = 2085

 Score =  329 bits (166), Expect = 2e-87
 Identities = 169/170 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctgctcacatttgttttcccactacatttatcatattgtccacttcaaaatttgtgaata 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2048 ctgctcacatttgttttcccactacatttatcatattgtccacttcaaaatttgtgaata 1989

                                                                        
Query: 61   gtacaaacaaaaggtggaagttattcacagctcgaggatataccacacccacactctaca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1988 gtacaaacaaaaggtggaagttattcacagctcgaggatataccacacccacactctaca 1929

                                                              
Query: 121  atctacaaacaaaatcggcattcccatcaagtatggaaatagtggcgctc 170
            |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1928 atctacaaacaaaatcggcattcccatcaagtatggaaatggtggcgctc 1879
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>gb|AF534907.1| Triticum aestivum sucrose-phosphate synthase 9 mRNA, complete cds
          Length = 3339

 Score =  299 bits (151), Expect = 1e-78
 Identities = 167/171 (97%), Gaps = 1/171 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctgctcacatttgttttcccactacatttatc-atattgtccacttcaaaatttgtgaat 59
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3232 ctgctcacatttgttttcccactacatttatcgatattgtccacttcaaaatttgtgaat 3173

                                                                        
Query: 60   agtacaaacaaaaggtggaagttattcacagctcgaggatataccacacccacactctac 119
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3172 agtacaaacaaaaggtggaagttattcacagctcgagaatataccacacccacactctac 3113

                                                               
Query: 120  aatctacaaacaaaatcggcattcccatcaagtatggaaatagtggcgctc 170
            |||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 3112 aatctacaaacaaaatcgacattcccatcaggtatggaaatagtggcgctc 3062
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>gb|BT009472.1| Triticum aestivum clone wr1.pk0028.h11:fis, full insert mRNA sequence
          Length = 1334

 Score =  299 bits (151), Expect = 1e-78
 Identities = 167/171 (97%), Gaps = 1/171 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ctgctcacatttgttttcccactacatttatc-atattgtccacttcaaaatttgtgaat 59
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1197 ctgctcacatttgttttcccactacatttatcgatattgtccacttcaaaatttgtgaat 1138

                                                                        
Query: 60   agtacaaacaaaaggtggaagttattcacagctcgaggatataccacacccacactctac 119
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1137 agtacaaacaaaaggtggaagttattcacagctcgagaatataccacacccacactctac 1078

                                                               
Query: 120  aatctacaaacaaaatcggcattcccatcaagtatggaaatagtggcgctc 170
            |||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1077 aatctacaaacaaaatcgacattcccatcaggtatggaaatagtggcgctc 1027
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>ref|XM_464358.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3259

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 127  aaacaaaatcggcattcccatcaagtatggaaatagtgg 165
            |||||||||||||||| ||||||||||||||||||||||
Sbjct: 3093 aaacaaaatcggcatttccatcaagtatggaaatagtgg 3055
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>ref|XM_506735.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1572_F02.13 mRNA
          Length = 3327

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 127  aaacaaaatcggcattcccatcaagtatggaaatagtgg 165
            |||||||||||||||| ||||||||||||||||||||||
Sbjct: 3121 aaacaaaatcggcatttccatcaagtatggaaatagtgg 3083
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>ref|XM_506734.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1572_F02.13 mRNA
          Length = 3490

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 127  aaacaaaatcggcattcccatcaagtatggaaatagtgg 165
            |||||||||||||||| ||||||||||||||||||||||
Sbjct: 3155 aaacaaaatcggcatttccatcaagtatggaaatagtgg 3117
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                      
Query: 127     aaacaaaatcggcattcccatcaagtatggaaatagtgg 165
               |||||||||||||||| ||||||||||||||||||||||
Sbjct: 4715942 aaacaaaatcggcatttccatcaagtatggaaatagtgg 4715904
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>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1572_F02
          Length = 93626

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                    
Query: 127   aaacaaaatcggcattcccatcaagtatggaaatagtgg 165
             |||||||||||||||| ||||||||||||||||||||||
Sbjct: 88014 aaacaaaatcggcatttccatcaagtatggaaatagtgg 87976
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>dbj|AK121486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150H16, full
            insert sequence
          Length = 3489

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 127  aaacaaaatcggcattcccatcaagtatggaaatagtgg 165
            |||||||||||||||| ||||||||||||||||||||||
Sbjct: 3154 aaacaaaatcggcatttccatcaagtatggaaatagtgg 3116
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>dbj|AK065273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L08, full
            insert sequence
          Length = 3326

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 127  aaacaaaatcggcattcccatcaagtatggaaatagtgg 165
            |||||||||||||||| ||||||||||||||||||||||
Sbjct: 3120 aaacaaaatcggcatttccatcaagtatggaaatagtgg 3082
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>dbj|AK063433.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D12, full
            insert sequence
          Length = 2711

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 127  aaacaaaatcggcattcccatcaagtatggaaatagtgg 165
            |||||||||||||||| ||||||||||||||||||||||
Sbjct: 1892 aaacaaaatcggcatttccatcaagtatggaaatagtgg 1854
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>dbj|AK098898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B04, full
            insert sequence
          Length = 3259

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 127  aaacaaaatcggcattcccatcaagtatggaaatagtgg 165
            |||||||||||||||| ||||||||| ||||||||||||
Sbjct: 3093 aaacaaaatcggcatttccatcaagtgtggaaatagtgg 3055
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.034
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 130      caaaatcggcattcccatcaagtatggaaat 160
                ||||||||||||  |||||||||||||||||
Sbjct: 25858800 caaaatcggcatctccatcaagtatggaaat 25858830
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>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0017B12
          Length = 157424

 Score = 46.1 bits (23), Expect = 0.034
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 130   caaaatcggcattcccatcaagtatggaaat 160
             ||||||||||||  |||||||||||||||||
Sbjct: 13898 caaaatcggcatctccatcaagtatggaaat 13928
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>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0416A11
          Length = 171519

 Score = 46.1 bits (23), Expect = 0.034
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 130    caaaatcggcattcccatcaagtatggaaat 160
              ||||||||||||  |||||||||||||||||
Sbjct: 141004 caaaatcggcatctccatcaagtatggaaat 141034
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>dbj|AK071732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111F20, full
           insert sequence
          Length = 1067

 Score = 46.1 bits (23), Expect = 0.034
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 130 caaaatcggcattcccatcaagtatggaaat 160
           ||||||||||||  |||||||||||||||||
Sbjct: 665 caaaatcggcatctccatcaagtatggaaat 635
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>gb|AY111176.1| Zea mays CL11730_1 mRNA sequence
          Length = 678

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 130 caaaatcggcattcccatcaagtatggaaa 159
           ||||||||||||||||||| || |||||||
Sbjct: 272 caaaatcggcattcccatcgagcatggaaa 301
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>gb|AC110222.9| Mus musculus chromosome 3, clone RP24-211P23, complete sequence
          Length = 179958

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 120   aatctacaaacaaaatcggca 140
             |||||||||||||||||||||
Sbjct: 10571 aatctacaaacaaaatcggca 10591
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>gb|AC159975.4| Mus musculus chromosome 3, clone RP24-204F16, complete sequence
          Length = 181930

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 120   aatctacaaacaaaatcggca 140
             |||||||||||||||||||||
Sbjct: 27983 aatctacaaacaaaatcggca 27963
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>gb|AC111024.13| Mus musculus chromosome 17, clone RP23-103P1, complete sequence
          Length = 219128

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 35     attgtccacttcaaaatttgtgaa 58
              |||||| |||||||||||||||||
Sbjct: 104745 attgtcaacttcaaaatttgtgaa 104768
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>gb|AC099035.2| Drosophila melanogaster clone BACR37H13, complete sequence
          Length = 175448

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      tgctcacatttgttttccca 21
              ||||||||||||||||||||
Sbjct: 127216 tgctcacatttgttttccca 127235
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>emb|AL589796.7| Human DNA sequence from clone RP13-469O16 on chromosome 6 Contains a
            nucleophosmin (nucleolar phosphoprotein B23, numatrin)
            (NPM1)(B23, NPM) pseudogene and a CpG island, complete
            sequence
          Length = 59577

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 48   aaatttgtgaatagtacaaacaaa 71
            |||||| |||||||||||||||||
Sbjct: 5189 aaatttatgaatagtacaaacaaa 5212
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>emb|AL136313.27| Human DNA sequence from clone RP4-551N11 on chromosome 6, complete
           sequence
          Length = 128152

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 32  catattgtccacttcaaaatttgt 55
           |||||||||||||| |||||||||
Sbjct: 553 catattgtccacttaaaaatttgt 530
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>gb|AC159976.4| Mus musculus chromosome 3, clone RP24-224M8, complete sequence
          Length = 161306

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  cacccacactctacaatcta 125
            ||||||||||||||||||||
Sbjct: 4525 cacccacactctacaatcta 4506
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>gb|DQ114495.1| Buchnera aphidicola tryptophan plasmid pTrp-BTg, partial sequence
          Length = 2963

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 57   aatagtacaaacaaaaggtggaagttat 84
            ||||| |||||||||| |||||||||||
Sbjct: 1754 aatagaacaaacaaaacgtggaagttat 1781
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>dbj|AK094561.1| Homo sapiens cDNA FLJ37242 fis, clone BRAMY2004335
          Length = 2969

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 12   tgttttcccactacatttatcatattgt 39
            |||||||| |||||||||||||| ||||
Sbjct: 1660 tgttttccaactacatttatcattttgt 1687
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>gb|AC079035.46| Homo sapiens 12 BAC RP11-863H1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 203977

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 34     tattgtccacttcaaaatttgtgaatag 61
              |||||| ||||||||||||||| |||||
Sbjct: 127713 tattgtacacttcaaaatttgttaatag 127686
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>tpg|BK003627.1| TPA: TPA_inf: Drosophila melanogaster HDC04208 (HDC04208) gene,
            complete cds
          Length = 2271

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    tgctcacatttgttttccca 21
            ||||||||||||||||||||
Sbjct: 1171 tgctcacatttgttttccca 1190
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>dbj|AK035087.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430086L19 product:unclassifiable, full insert
            sequence
          Length = 1536

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  cacccacactctacaatcta 125
            ||||||||||||||||||||
Sbjct: 1397 cacccacactctacaatcta 1378
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>gb|AC008352.2|AC008352 Drosophila melanogaster, chromosome 2R, region 59C-59D, BAC clone
             BACR08P09, complete sequence
          Length = 181463

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     tgctcacatttgttttccca 21
             ||||||||||||||||||||
Sbjct: 63886 tgctcacatttgttttccca 63905
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 100     ataccacacccacactctacaatctaca 127
               |||||||||||||||| |||||| ||||
Sbjct: 3443594 ataccacacccacactttacaatttaca 3443621
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>gb|AC110740.15| Mus musculus chromosome 8, clone RP24-421B13, complete sequence
          Length = 213782

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 47     aaaatttgtgaatagtacaaacaa 70
              |||||| |||||||||||||||||
Sbjct: 130376 aaaattggtgaatagtacaaacaa 130399
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>gb|AC115021.15| Mus musculus chromosome 3, clone RP24-232N19, complete sequence
          Length = 168461

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    cacccacactctacaatcta 125
              ||||||||||||||||||||
Sbjct: 108479 cacccacactctacaatcta 108460
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>gb|AC007177.1|AC007177 Drosophila melanogaster, chromosome 2R, region 59C1-59C5, P1 clones
             DS06621 and DS02186, complete sequence
          Length = 101320

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tgctcacatttgttttccca 21
             ||||||||||||||||||||
Sbjct: 14715 tgctcacatttgttttccca 14696
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>gb|AE003459.3| Drosophila melanogaster chromosome 2R, section 67 of 73 of the complete
              sequence
          Length = 283700

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      tgctcacatttgttttccca 21
              ||||||||||||||||||||
Sbjct: 129699 tgctcacatttgttttccca 129718
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>gb|AC004053.1|AC004053 Homo sapiens chromosome 4 clone B211A1 map 4q25, complete sequence
          Length = 166900

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 12   tgttttcccactacatttatcatattgt 39
            |||||||| |||||||||||||| ||||
Sbjct: 5138 tgttttccaactacatttatcattttgt 5165
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 100     ataccacacccacactctacaatctaca 127
               |||||||||||||||| |||||| ||||
Sbjct: 3443540 ataccacacccacactttacaatttaca 3443567
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>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 116371

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 100   ataccacacccacactctacaatctaca 127
             |||||||||||||||| |||||| ||||
Sbjct: 88320 ataccacacccacactttacaatttaca 88293
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>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 137936

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 100    ataccacacccacactctacaatctaca 127
              |||||||||||||||| |||||| ||||
Sbjct: 122647 ataccacacccacactttacaatttaca 122674
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>emb|CT010580.7| Mouse DNA sequence from clone RP23-233G23 on chromosome 17, complete
              sequence
          Length = 220567

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 35     attgtccacttcaaaatttgtgaa 58
              |||||| |||||||||||||||||
Sbjct: 143514 attgtcaacttcaaaatttgtgaa 143537
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>gb|AC122363.4| Mus musculus BAC clone RP23-437C1 from chromosome 19, complete sequence
          Length = 180129

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 114    ctctacaatctacaaacaaaatc 136
              |||||||||||||||| ||||||
Sbjct: 123163 ctctacaatctacaaagaaaatc 123141
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>gb|AC136363.2| Homo sapiens chromosome 17, clone RP11-18L18, complete sequence
          Length = 87532

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 111   acactctacaatctacaaa 129
             |||||||||||||||||||
Sbjct: 36503 acactctacaatctacaaa 36521
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>gb|AF049895.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence
          Length = 331864

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 107   acccacactctacaatcta 125
             |||||||||||||||||||
Sbjct: 69174 acccacactctacaatcta 69156
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>gb|AC111125.11| Mus musculus chromosome 9, clone RP23-331P8, complete sequence
          Length = 260036

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 63     acaaacaaaaggtggaagt 81
              |||||||||||||||||||
Sbjct: 236536 acaaacaaaaggtggaagt 236518
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>gb|AC005153.2| Homo sapiens PAC clone RP4-537P9 from 7, complete sequence
          Length = 124191

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     ctgctcacatttgttttcc 19
             |||||||||||||||||||
Sbjct: 23309 ctgctcacatttgttttcc 23291
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>ref|XM_386141.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05965.1)
           partial mRNA
          Length = 1098

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 133 aatcggcattcccatcaag 151
           |||||||||||||||||||
Sbjct: 762 aatcggcattcccatcaag 780
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>gb|AC122460.4| Mus musculus BAC clone RP24-283I1 from chromosome 19, complete sequence
          Length = 173119

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 4     ctcacatttgttttcccactaca 26
             |||||||||||||||| ||||||
Sbjct: 64472 ctcacatttgttttccaactaca 64450
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>gb|AC133654.4| Mus musculus BAC clone RP24-332N10 from chromosome 15, complete
             sequence
          Length = 194622

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 102   accacacccacactctaca 120
             |||||||||||||||||||
Sbjct: 49546 accacacccacactctaca 49564
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>gb|AC124177.2| Mus musculus BAC clone RP23-193C10 from 3, complete sequence
          Length = 217266

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 101    taccacacccacactctac 119
              |||||||||||||||||||
Sbjct: 115157 taccacacccacactctac 115139
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>ref|XM_645245.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (226.t00005)
           partial mRNA
          Length = 1746

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 45  tcaaaatttgtgaatagta 63
           |||||||||||||||||||
Sbjct: 292 tcaaaatttgtgaatagta 310
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>ref|XM_670132.1| Plasmodium berghei strain ANKA hypothetical protein (PB001299.00.0)
           partial mRNA
          Length = 2535

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 11  ttgttttcccactacattt 29
           |||||||||||||||||||
Sbjct: 720 ttgttttcccactacattt 702
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>emb|AL360013.8| Human DNA sequence from clone RP11-103C3 on chromosome 1 Contains a
             novel gene and a solute carrier family 35 member E3
             (SLC35E3) pseudogene, complete sequence
          Length = 155157

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 117   tacaatctacaaacaaaat 135
             |||||||||||||||||||
Sbjct: 23810 tacaatctacaaacaaaat 23828
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>emb|AL118496.22|HSJ136J15 Human DNA sequence from clone RP1-136J15 on chromosome Xq23-24 Contains
             a mitofusin 1 (MFN1) pseudogene, the KCNE1L gene for
             potassium voltage-gated channel, Isk-related family,
             member 1-like, the 3' end of the FACL4 gene for
             fatty-acid-Coenzyme A ligase long-chain 4, a novel gene
             and two CpG islands, complete sequence
          Length = 125465

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    ttgttttcccactacattt 29
             |||||||||||||||||||
Sbjct: 90089 ttgttttcccactacattt 90107
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>emb|AL023773.1|HS406C18 Human DNA sequence from clone RP3-406C18 on chromosome Xq27.1-27.3
             Contains two MAGE (Melanoma Associated Antigen) family
             pseudogenes, complete sequence
          Length = 116210

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    atattgtccacttcaaaatttgt 55
             ||||||| |||||||||||||||
Sbjct: 54106 atattgtacacttcaaaatttgt 54128
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>emb|BX248243.23| Zebrafish DNA sequence from clone CH211-225L7 in linkage group 7,
              complete sequence
          Length = 161572

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 106    cacccacactctacaatct 124
              |||||||||||||||||||
Sbjct: 122553 cacccacactctacaatct 122571
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>emb|AL732516.6| Mouse DNA sequence from clone RP23-403H17 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 99659

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    tacatttatcatattgtcc 41
             |||||||||||||||||||
Sbjct: 43728 tacatttatcatattgtcc 43710
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>gb|AC158402.6| Mus musculus chromosome 1, clone RP24-328M23, complete sequence
          Length = 176270

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 64    caaacaaaaggtggaagtt 82
             |||||||||||||||||||
Sbjct: 24610 caaacaaaaggtggaagtt 24592
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>gb|AC123903.2| Homo sapiens chromosome 3 clone RP11-182A24, complete sequence
          Length = 162351

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 19     ccactacatttatcatatt 37
              |||||||||||||||||||
Sbjct: 117074 ccactacatttatcatatt 117056
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>gb|AC093454.3| Drosophila melanogaster 3L BAC RP98-23K2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 168479

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 112   cactctacaatctacaaac 130
             |||||||||||||||||||
Sbjct: 68813 cactctacaatctacaaac 68795
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 131    aaaatcggcattcccatca 149
              |||||||||||||||||||
Sbjct: 574794 aaaatcggcattcccatca 574776
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>gb|AC149075.3| Danio rerio clone busm1-36i3, complete sequence
          Length = 26556

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    acatttatcatattgtcca 42
             |||||||||||||||||||
Sbjct: 16185 acatttatcatattgtcca 16203
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>gb|AC145871.4| Pan troglodytes BAC clone RP43-6N15 from chromosome 7, complete sequence
          Length = 230197

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      ctgctcacatttgttttcc 19
              |||||||||||||||||||
Sbjct: 181404 ctgctcacatttgttttcc 181422
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>gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex BAC MMU012K22, complete
              sequence
          Length = 174897

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 33     atattgtccacttcaaaatttgt 55
              ||||||| |||||||||||||||
Sbjct: 153997 atattgtgcacttcaaaatttgt 154019
to top
>gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex BAC MMU007H18, complete
              sequence
          Length = 215614

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 33     atattgtccacttcaaaatttgt 55
              ||||||| |||||||||||||||
Sbjct: 105345 atattgtgcacttcaaaatttgt 105367
to top
>dbj|AK037071.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
            library, clone:9930108I22 product:unclassifiable, full
            insert sequence
          Length = 2411

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 21   actacatttatcatattgt 39
            |||||||||||||||||||
Sbjct: 1852 actacatttatcatattgt 1834
to top
>ref|XM_397430.2| PREDICTED: Apis mellifera similar to sensory neuron membrane protein
            1 (LOC413995), mRNA
          Length = 2286

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 60   agtacaaacaaaaggtgga 78
            |||||||||||||||||||
Sbjct: 989  agtacaaacaaaaggtgga 1007
to top
>gb|AC156835.2| Mus musculus BAC clone RP23-322L4 from chromosome 9, complete sequence
          Length = 216124

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    acaaacaaaaggtggaagt 81
             |||||||||||||||||||
Sbjct: 63792 acaaacaaaaggtggaagt 63774
to top
>gb|AC026457.8| Homo sapiens chromosome 16 clone RP11-105C20, complete sequence
          Length = 171477

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    actacatttatcatattgt 39
             |||||||||||||||||||
Sbjct: 66819 actacatttatcatattgt 66801
to top
>gb|AC131274.9| Homo sapiens chromosome 17, clone RP11-285M22, complete sequence
          Length = 158329

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 111   acactctacaatctacaaa 129
             |||||||||||||||||||
Sbjct: 54005 acactctacaatctacaaa 54023
to top
>emb|BX119959.7| Mouse DNA sequence from clone RP23-346N16 on chromosome X, complete
              sequence
          Length = 193860

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 114    ctctacaatctacaaacaa 132
              |||||||||||||||||||
Sbjct: 126615 ctctacaatctacaaacaa 126597
to top
>gb|AC004612.1|AC004612 Homo sapiens PAC clone RP1-318J7 from 8q21, complete sequence
          Length = 88295

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 107   acccacactctacaatcta 125
             |||||||||||||||||||
Sbjct: 24099 acccacactctacaatcta 24081
to top
>emb|BX248515.4| Zebrafish DNA sequence from clone DKEY-177P2 in linkage group 20,
             complete sequence
          Length = 212105

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 118   acaatctacaaacaaaatc 136
             |||||||||||||||||||
Sbjct: 30083 acaatctacaaacaaaatc 30065
to top
>gb|AE003528.3| Drosophila melanogaster chromosome 3L, section 57 of 83 of the complete
              sequence
          Length = 283815

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 112    cactctacaatctacaaac 130
              |||||||||||||||||||
Sbjct: 197578 cactctacaatctacaaac 197596
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>dbj|AP003397.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1007G5, complete
             sequences
          Length = 184643

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 14    ttttcccactacatttatc 32
             |||||||||||||||||||
Sbjct: 46317 ttttcccactacatttatc 46299
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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 102     accacacccacactctaca 120
               |||||||||||||||||||
Sbjct: 1879048 accacacccacactctaca 1879066
to top
>gb|AF069291.1|AF069291 Homo sapiens BAC clone 255A7 from 8q21 containing NBS1 gene, complete
              sequence
          Length = 184919

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 107    acccacactctacaatcta 125
              |||||||||||||||||||
Sbjct: 157102 acccacactctacaatcta 157084
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>gb|AC132481.4| Mus musculus BAC clone RP23-14I14 from 17, complete sequence
          Length = 225031

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    actacatttatcatattgt 39
             |||||||||||||||||||
Sbjct: 78074 actacatttatcatattgt 78092
to top
>emb|AL732320.8| Mouse DNA sequence from clone RP23-140D16 on chromosome 2, complete
             sequence
          Length = 192010

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     gctcacatttgttttccca 21
             |||||||||||||||||||
Sbjct: 56389 gctcacatttgttttccca 56407


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,961,541
Number of Sequences: 3902068
Number of extensions: 1961541
Number of successful extensions: 130019
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129602
Number of HSP's gapped (non-prelim): 415
length of query: 170
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 148
effective length of database: 17,147,199,772
effective search space: 2537785566256
effective search space used: 2537785566256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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