Clone Name | rbastl38d11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ATK3_ARATH (P46875) Kinesin-3 (Kinesin-like protein C) | 47 | 2e-05 | 2 | ATK1_ARATH (Q07970) Kinesin-1 (Kinesin-like protein A) | 47 | 2e-05 | 3 | ATK2_ARATH (P46864) Kinesin-2 (Kinesin-like protein B) | 38 | 0.008 | 4 | KLP2_SCHPO (Q9US03) Kinesin-like protein 2 | 30 | 2.2 | 5 | KIFC2_MOUSE (O08672) Kinesin-like protein KIFC2 | 28 | 6.4 | 6 | KIFC3_MOUSE (O35231) Kinesin-like protein KIFC3 | 28 | 8.3 | 7 | REB1_YEAST (P21538) DNA-binding protein REB1 (QBP) | 28 | 8.3 | 8 | SYE_METMP (Q6LYI0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta... | 28 | 8.3 |
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>ATK3_ARATH (P46875) Kinesin-3 (Kinesin-like protein C)| Length = 754 Score = 46.6 bits (109), Expect = 2e-05 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = -3 Query: 413 CSLRFAARVNSCEIGVPRRQTQMRSL 336 CSLRFAARVN+CEIG PRRQT ++ L Sbjct: 722 CSLRFAARVNACEIGTPRRQTNIKPL 747
>ATK1_ARATH (Q07970) Kinesin-1 (Kinesin-like protein A)| Length = 793 Score = 46.6 bits (109), Expect = 2e-05 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = -3 Query: 413 CSLRFAARVNSCEIGVPRRQTQMRSL 336 CSLRFAARVN+CEIG+PRRQT + L Sbjct: 761 CSLRFAARVNACEIGIPRRQTSTKLL 786
>ATK2_ARATH (P46864) Kinesin-2 (Kinesin-like protein B)| Length = 745 Score = 38.1 bits (87), Expect = 0.008 Identities = 17/26 (65%), Positives = 18/26 (69%) Frame = -3 Query: 413 CSLRFAARVNSCEIGVPRRQTQMRSL 336 CSLRFAARVN+CEIG R R L Sbjct: 713 CSLRFAARVNACEIGTAHRHVNARPL 738
>KLP2_SCHPO (Q9US03) Kinesin-like protein 2| Length = 817 Score = 30.0 bits (66), Expect = 2.2 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -3 Query: 413 CSLRFAARVNSCEIGVPRRQTQ 348 CSLRFA +VN+ +IG R+ T+ Sbjct: 796 CSLRFATKVNNTQIGTARKVTK 817
>KIFC2_MOUSE (O08672) Kinesin-like protein KIFC2| Length = 792 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -3 Query: 413 CSLRFAARVNSCEIGVPRRQTQMRS 339 CSL+FA RV E+G RR+ RS Sbjct: 721 CSLKFAERVGQVELGPARRRRAPRS 745
>KIFC3_MOUSE (O35231) Kinesin-like protein KIFC3| Length = 687 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -3 Query: 410 SLRFAARVNSCEIGVPRRQTQMRSLS 333 SLRFA RV S E+G R+T++ S S Sbjct: 619 SLRFAERVRSVELGPGSRRTELGSWS 644
>REB1_YEAST (P21538) DNA-binding protein REB1 (QBP)| Length = 810 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +2 Query: 176 NNKANENIQPLNAVQMMDCIPQLSTNKQHTYITD 277 NN +ENI LNA + + ++N+QH + D Sbjct: 72 NNDDSENISALNANESSSNVDHANSNEQHNAVMD 105
>SYE_METMP (Q6LYI0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 555 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 Query: 236 PQLSTNKQHTYITDGPWMGWD 298 P LST+K H I G + GWD Sbjct: 325 PVLSTSKMHAGILSGEYSGWD 345 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,049,196 Number of Sequences: 219361 Number of extensions: 922959 Number of successful extensions: 1907 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1870 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1907 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)