ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 46 0.089
2gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
3gb|AF458095.1| Oryctolagus cuniculus organic cation transporter ... 44 0.35
4gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.35
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
6dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.35
7dbj|AK106189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
8dbj|AK069875.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
9gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
10gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, comp... 42 1.4
11gb|AC123605.8| Mus musculus chromosome 5, clone RP24-176O2, comp... 42 1.4
12ref|XM_446403.1| Candida glabrata CBS138, CAGL0G00968g partial mRNA 42 1.4
13emb|CR380953.1| Candida glabrata strain CBS138 chromosome G comp... 42 1.4
14gb|AC104108.3| Homo sapiens chromosome 5 clone CTD-2037K23, comp... 42 1.4
15gb|AE005937.1| Caulobacter crescentus CB15 section 263 of 359 of... 42 1.4
16gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.4
17gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 5.5
18ref|XM_450714.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
19gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
20gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, comp... 40 5.5
21gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 5.5
22ref|XM_418592.1| PREDICTED: Gallus gallus similar to trans-preny... 40 5.5
23gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 5.5
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.5
25gb|AC122376.4| Mus musculus BAC clone RP23-472G10 from chromosom... 40 5.5
26ref|XM_759639.1| Theileria parva strain Muguga hypothetical prot... 40 5.5
27emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.5
28emb|BX640423.1| Bordetella parapertussis strain 12822, complete ... 40 5.5
29emb|BX640422.1| Bordetella pertussis strain Tohama I, complete g... 40 5.5
30emb|AL669856.6| Mouse DNA sequence from clone RP23-46I13 on chro... 40 5.5
31gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.5
32gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 5.5
33gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.5
34dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 40 5.5
35ref|NM_136370.1| Drosophila melanogaster CG15233-RA (CG15233), mRNA 40 5.5
36gb|AY061138.1| Drosophila melanogaster LD11861 full length cDNA 40 5.5
37dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
39dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
41gb|AC007593.5|AC007593 Drosophila melanogaster, chromosome 2R, r... 40 5.5
42dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.5
43dbj|AP006457.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
44dbj|AP005384.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
45dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
46dbj|AK071768.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
47dbj|AK068149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
48dbj|AK066038.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
49gb|AY111538.1| Zea mays CL39286_1 mRNA sequence 40 5.5
50gb|AE003789.5| Drosophila melanogaster chromosome 2R, section 6 ... 40 5.5
51gb|AC152167.3| Mus musculus BAC clone RP23-330B16 from 7, comple... 40 5.5
52dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.5 
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 282     cgcgtcctcctcgcgccgcaccgccgc 308
               |||| ||||||||||||||||||||||
Sbjct: 2880372 cgcggcctcctcgcgccgcaccgccgc 2880398
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>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0019E05, complete sequence
          Length = 129021

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 295   cgccgcaccgccgccaccacca 316
             ||||||||||||||||||||||
Sbjct: 67069 cgccgcaccgccgccaccacca 67048
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>gb|AF458095.1| Oryctolagus cuniculus organic cation transporter 2 mRNA, complete cds
          Length = 2180

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 245  tcccggccgccttgctcatcattgcc 270
            ||||||||||||| ||||||||||||
Sbjct: 1202 tcccggccgccttcctcatcattgcc 1227
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 297     ccgcaccgccgccaccaccatc 318
               ||||||||||||||||||||||
Sbjct: 3658538 ccgcaccgccgccaccaccatc 3658559
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 295      cgccgcaccgccgccaccacca 316
                ||||||||||||||||||||||
Sbjct: 17192467 cgccgcaccgccgccaccacca 17192446
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 173     tctcccggatccggtccagctc 194
               ||||||||||||||||||||||
Sbjct: 6224045 tctcccggatccggtccagctc 6224024
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>dbj|AK106189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D12, full
           insert sequence
          Length = 1396

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 295 cgccgcaccgccgccaccacca 316
           ||||||||||||||||||||||
Sbjct: 852 cgccgcaccgccgccaccacca 831
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>dbj|AK069875.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036D07, full
            insert sequence
          Length = 1472

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  cgccgcaccgccgccaccacca 316
            ||||||||||||||||||||||
Sbjct: 1083 cgccgcaccgccgccaccacca 1062
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 295      cgccgcaccgccgccaccacca 316
                ||||||||||||||||||||||
Sbjct: 17287653 cgccgcaccgccgccaccacca 17287632
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>gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, complete sequence
          Length = 173643

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 48     tcctcctccttccgggccagaacaa 72
              ||||||||||||| |||||||||||
Sbjct: 105517 tcctcctccttcctggccagaacaa 105493
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>gb|AC123605.8| Mus musculus chromosome 5, clone RP24-176O2, complete sequence
          Length = 211657

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 48    tcctcctccttccgggccagaacaa 72
             ||||||||||||| |||||||||||
Sbjct: 11636 tcctcctccttcctggccagaacaa 11612
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>ref|XM_446403.1| Candida glabrata CBS138, CAGL0G00968g partial mRNA
          Length = 2340

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 308  ccaccaccatccgcccctcct 328
            |||||||||||||||||||||
Sbjct: 1792 ccaccaccatccgcccctcct 1812
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>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence
          Length = 992211

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 308   ccaccaccatccgcccctcct 328
             |||||||||||||||||||||
Sbjct: 86339 ccaccaccatccgcccctcct 86319
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>gb|AC104108.3| Homo sapiens chromosome 5 clone CTD-2037K23, complete sequence
          Length = 156572

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 15     ctacattggggacaatgaatg 35
              |||||||||||||||||||||
Sbjct: 105531 ctacattggggacaatgaatg 105551
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>gb|AE005937.1| Caulobacter crescentus CB15 section 263 of 359 of the complete genome
          Length = 10805

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 289  tcctcgcgccgcaccgccgcc 309
            |||||||||||||||||||||
Sbjct: 4635 tcctcgcgccgcaccgccgcc 4615
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 299     gcaccgccgccaccaccatcc 319
               |||||||||||||||||||||
Sbjct: 1642817 gcaccgccgccaccaccatcc 1642797
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 77     acatcttgctgctgttcaacatgt 100
              ||||| ||||||||||||||||||
Sbjct: 277651 acatcctgctgctgttcaacatgt 277628
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>ref|XM_450714.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 435

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 286 tcctcctcgcgccgcaccgccgccacca 313
           |||||||| |||||| ||||||||||||
Sbjct: 317 tcctcctcccgccgcgccgccgccacca 290
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>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06,
              complete sequence
          Length = 142659

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    taaaagttatcatttgccat 155
              ||||||||||||||||||||
Sbjct: 126347 taaaagttatcatttgccat 126328
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>gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, complete sequence
          Length = 239688

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     tgctgttcaacatgtccact 105
              ||||||||||||||||||||
Sbjct: 201660 tgctgttcaacatgtccact 201641
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 180     gatccggtccagctccagca 199
               ||||||||||||||||||||
Sbjct: 1543341 gatccggtccagctccagca 1543322
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>ref|XM_418592.1| PREDICTED: Gallus gallus similar to trans-prenyltransferase;
           polyprenyl pyrophosphate synthetase; 2610203G20Rik;
           2700031G06Rik (LOC420490), mRNA
          Length = 1620

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 294 gcgccgcaccgccgccacca 313
           ||||||||||||||||||||
Sbjct: 32  gcgccgcaccgccgccacca 13
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    ccgcaccgccgccaccacca 316
              ||||||||||||||||||||
Sbjct: 230590 ccgcaccgccgccaccacca 230571
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 300     caccgccgccaccaccatcc 319
               ||||||||||||||||||||
Sbjct: 7323072 caccgccgccaccaccatcc 7323053
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>gb|AC122376.4| Mus musculus BAC clone RP23-472G10 from chromosome 7, complete sequence
          Length = 183918

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     agcacatcttgctgctgttc 93
              ||||||||||||||||||||
Sbjct: 132693 agcacatcttgctgctgttc 132712
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>ref|XM_759639.1| Theileria parva strain Muguga hypothetical protein (TP02_0168)
           partial mRNA
          Length = 1845

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  acatcttgctgctgttcaac 96
           ||||||||||||||||||||
Sbjct: 521 acatcttgctgctgttcaac 502
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>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   cctcgcgccgcaccgccgcc 309
             ||||||||||||||||||||
Sbjct: 68736 cctcgcgccgcaccgccgcc 68717
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>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14
          Length = 348251

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   cctcgcgccgcaccgccgcc 309
             ||||||||||||||||||||
Sbjct: 68725 cctcgcgccgcaccgccgcc 68706
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>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12
          Length = 257701

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   cctcgcgccgcaccgccgcc 309
             ||||||||||||||||||||
Sbjct: 36406 cctcgcgccgcaccgccgcc 36387
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>emb|AL669856.6| Mouse DNA sequence from clone RP23-46I13 on chromosome 11 Contains part
             of the Slit 3 gene for slit homolog 3 (Drosophila), a
             novel gene and a ribosomal protein L21 (Rpl21) pseudogene,
             complete sequence
          Length = 264752

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    ctacacttcctcctccttcc 60
             ||||||||||||||||||||
Sbjct: 10153 ctacacttcctcctccttcc 10172
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 241     ccgatcccggccgccttgct 260
               ||||||||||||||||||||
Sbjct: 1809968 ccgatcccggccgccttgct 1809949
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 175     tcccggatccggtccagctccagc 198
               ||||||||||||||||| ||||||
Sbjct: 1487430 tcccggatccggtccaggtccagc 1487407
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>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0060E18, from chromosome 3, complete sequence
          Length = 147983

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   caccgccgccaccaccatcc 319
             ||||||||||||||||||||
Sbjct: 74328 caccgccgccaccaccatcc 74309
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>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    caccgccgccaccaccatcc 319
              ||||||||||||||||||||
Sbjct: 620156 caccgccgccaccaccatcc 620175
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>ref|NM_136370.1| Drosophila melanogaster CG15233-RA (CG15233), mRNA
          Length = 459

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 151 gccatcgtcatcgtcgccat 170
           ||||||||||||||||||||
Sbjct: 409 gccatcgtcatcgtcgccat 428
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>gb|AY061138.1| Drosophila melanogaster LD11861 full length cDNA
          Length = 1737

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 151 gccatcgtcatcgtcgccat 170
           ||||||||||||||||||||
Sbjct: 524 gccatcgtcatcgtcgccat 543
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 286      tcctcctcgcgccgcaccgccgccacca 313
                |||||||| |||||| ||||||||||||
Sbjct: 12363215 tcctcctcccgccgcgccgccgccacca 12363188
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 136     taaaagttatcatttgccat 155
               ||||||||||||||||||||
Sbjct: 1813618 taaaagttatcatttgccat 1813599
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 300     caccgccgccaccaccatcc 319
               ||||||||||||||||||||
Sbjct: 7320967 caccgccgccaccaccatcc 7320948
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 286      tcctcctcgcgccgcaccgccgcc 309
                ||||||||||||||| ||||||||
Sbjct: 23328583 tcctcctcgcgccgcgccgccgcc 23328606



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 286      tcctcctcgcgccgcaccgccgcc 309
                ||||||||||||||| ||||||||
Sbjct: 23316494 tcctcctcgcgccgcgccgccgcc 23316517
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>gb|AC007593.5|AC007593 Drosophila melanogaster, chromosome 2R, region 42E-43A, BAC clone
             BACR01C10, complete sequence
          Length = 173702

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   gccatcgtcatcgtcgccat 170
             ||||||||||||||||||||
Sbjct: 58526 gccatcgtcatcgtcgccat 58507
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 293     cgcgccgcaccgccgccacc 312
               ||||||||||||||||||||
Sbjct: 4851278 cgcgccgcaccgccgccacc 4851259
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>dbj|AP006457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0038P01
          Length = 148506

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   tcctcctcgcgccgcaccgccgcc 309
             ||||||||||||||| ||||||||
Sbjct: 41658 tcctcctcgcgccgcgccgccgcc 41681



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   tcctcctcgcgccgcaccgccgcc 309
             ||||||||||||||| ||||||||
Sbjct: 29569 tcctcctcgcgccgcgccgccgcc 29592
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>dbj|AP005384.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_D02
          Length = 112773

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   tcctcctcgcgccgcaccgccgcc 309
             ||||||||||||||| ||||||||
Sbjct: 87729 tcctcctcgcgccgcgccgccgcc 87752



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   tcctcctcgcgccgcaccgccgcc 309
             ||||||||||||||| ||||||||
Sbjct: 75640 tcctcctcgcgccgcgccgccgcc 75663
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>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0599F09
          Length = 157415

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 286   tcctcctcgcgccgcaccgccgccacca 313
             |||||||| |||||| ||||||||||||
Sbjct: 28799 tcctcctcccgccgcgccgccgccacca 28772
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>dbj|AK071768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110G13, full
           insert sequence
          Length = 993

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 caccgccgccaccaccatcc 319
           ||||||||||||||||||||
Sbjct: 665 caccgccgccaccaccatcc 684
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>dbj|AK068149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131M23, full
           insert sequence
          Length = 1226

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 caccgccgccaccaccatcc 319
           ||||||||||||||||||||
Sbjct: 827 caccgccgccaccaccatcc 846
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>dbj|AK066038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047G22, full
           insert sequence
          Length = 1270

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 caccgccgccaccaccatcc 319
           ||||||||||||||||||||
Sbjct: 895 caccgccgccaccaccatcc 914
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>gb|AY111538.1| Zea mays CL39286_1 mRNA sequence
          Length = 586

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 172 ttctcccggatccggtccagctcc 195
           |||||| |||||||||||||||||
Sbjct: 387 ttctccaggatccggtccagctcc 410
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>gb|AE003789.5| Drosophila melanogaster chromosome 2R, section 6 of 73 of the complete
              sequence
          Length = 415717

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    gccatcgtcatcgtcgccat 170
              ||||||||||||||||||||
Sbjct: 345394 gccatcgtcatcgtcgccat 345375
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>gb|AC152167.3| Mus musculus BAC clone RP23-330B16 from 7, complete sequence
          Length = 215518

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    agcacatcttgctgctgttc 93
             ||||||||||||||||||||
Sbjct: 22945 agcacatcttgctgctgttc 22926
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 176     cccggatccggtccagctcc 195
               ||||||||||||||||||||
Sbjct: 2060156 cccggatccggtccagctcc 2060175


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,406,623
Number of Sequences: 3902068
Number of extensions: 3406623
Number of successful extensions: 98676
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97323
Number of HSP's gapped (non-prelim): 1353
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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