ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IDE_HUMAN (P14735) Insulin-degrading enzyme (EC 3.4.24.56) (Insu... 37 0.021
2IDE_RAT (P35559) Insulin-degrading enzyme (EC 3.4.24.56) (Insuly... 37 0.021
3IDE_MOUSE (Q9JHR7) Insulin-degrading enzyme (EC 3.4.24.56) (Insu... 37 0.027
4SH2D5_PONPY (Q5R732) SH2 domain-containing protein 5 32 0.67
5SH2D5_HUMAN (Q6ZV89) SH2 domain-containing protein 5 32 0.67
6RUVA_SYMTH (Q67Q98) Holliday junction ATP-dependent DNA helicase... 30 1.9
7PDLI7_CHICK (Q679P3) PDZ and LIM domain protein 7 (LIM mineraliz... 30 3.3
8SPB8_BOVIN (Q5BIR5) Serpin B8 29 5.7
9LY9_MOUSE (Q01965) T-lymphocyte surface antigen Ly-9 precursor (... 28 9.7

>IDE_HUMAN (P14735) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)|
            (Insulinase) (Insulin protease)
          Length = 1018

 Score = 37.0 bits (84), Expect = 0.021
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = -1

Query: 436  ALLRELKKEEFIEFFDEYIKVDAPQRRTVSVQVFS 332
            A L+ L KE+ I+F+ E + VDAP+R  VSV V +
Sbjct: 925  AYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLA 959



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>IDE_RAT (P35559) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)|
            (Insulinase) (Insulin protease)
          Length = 1019

 Score = 37.0 bits (84), Expect = 0.021
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
 Frame = -1

Query: 436  ALLRELKKEEFIEFFDEYIKVDAPQRRTVSVQVFS---------GNHSAEFKKAIAE-DD 287
            A L+ L K++ I+F+ E + VDAP+R  VSV V +         G   ++    ++E   
Sbjct: 926  AYLKTLSKDDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLSEAPP 985

Query: 286  LPKTCRITDIFGFKRSRPLHRSLK 215
            LP+   I ++  FKR  PL   +K
Sbjct: 986  LPQPEVIHNMTEFKRGLPLFPLVK 1009



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>IDE_MOUSE (Q9JHR7) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)|
            (Insulinase) (Insulin protease)
          Length = 1019

 Score = 36.6 bits (83), Expect = 0.027
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
 Frame = -1

Query: 436  ALLRELKKEEFIEFFDEYIKVDAPQRRTVSVQVFS---------GNHSAEFKKAIAE-DD 287
            A L+ L K++ I F+ E + VDAP+R  VSV V +         G   ++    ++E   
Sbjct: 926  AYLKTLTKDDIIRFYQEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLSEAPP 985

Query: 286  LPKTCRITDIFGFKRSRPLHRSLK 215
            LP+   I ++  FKR  PL   +K
Sbjct: 986  LPQPEVIHNMTEFKRGLPLFPLVK 1009



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>SH2D5_PONPY (Q5R732) SH2 domain-containing protein 5|
          Length = 339

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = -3

Query: 377 GGRPSKEDSERAGLQRQPFGRVQEGDRRG*PAQNLPDYRHIRLQAITASA---PLAEGRS 207
           G  P K  S   GL R+PFGR    D+       L  +R +  + +  S    P +EGR+
Sbjct: 81  GEVPLKPLSSSGGLVREPFGR----DQLSQNVHALVSFRRLPAEGLVGSGKELPESEGRA 136

Query: 206 RPDHNGLTYC 177
           R    G  YC
Sbjct: 137 RHARLGNPYC 146



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>SH2D5_HUMAN (Q6ZV89) SH2 domain-containing protein 5|
          Length = 339

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = -3

Query: 377 GGRPSKEDSERAGLQRQPFGRVQEGDRRG*PAQNLPDYRHIRLQAITASA---PLAEGRS 207
           G  P K  S   GL R+PFGR    D+       L  +R +  + +  S    P +EGR+
Sbjct: 81  GEVPLKPLSSSGGLVREPFGR----DQLSQNVHALVSFRRLPAEGLVGSGKELPESEGRA 136

Query: 206 RPDHNGLTYC 177
           R    G  YC
Sbjct: 137 RHARLGNPYC 146



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>RUVA_SYMTH (Q67Q98) Holliday junction ATP-dependent DNA helicase ruvA (EC|
           3.6.1.-)
          Length = 205

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 21/68 (30%), Positives = 36/68 (52%)
 Frame = -1

Query: 400 EFFDEYIKVDAPQRRTVSVQVFSGNHSAEFKKAIAEDDLPKTCRITDIFGFKRSRPLHRS 221
           + F+  ++VD    + V++ V S    A F++A+A +DL   CR+  I G K ++ L   
Sbjct: 70  DLFELLLRVDGVGPK-VALAVLSTTDPAAFRRAVAFEDLDAICRVPGI-GRKTAQRLVLE 127

Query: 220 LKGGPGRI 197
           LK   G +
Sbjct: 128 LKDKIGAV 135



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>PDLI7_CHICK (Q679P3) PDZ and LIM domain protein 7 (LIM mineralization protein)|
          Length = 416

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 124 QNWVHACGDRLCTTLQTMQ 180
           QN + ACGDRLC TL   Q
Sbjct: 67  QNRIRACGDRLCLTLSRAQ 85



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>SPB8_BOVIN (Q5BIR5) Serpin B8|
          Length = 374

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +1

Query: 220 ASGAEAVIA*SRICR*SGKFWAGHP 294
           A+GA AV+  SR CR   KF A HP
Sbjct: 328 AAGATAVVRNSRCCRMEPKFCADHP 352



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>LY9_MOUSE (Q01965) T-lymphocyte surface antigen Ly-9 precursor (Lymphocyte|
           antigen 9) (Cell-surface molecule Ly-9)
          Length = 654

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = -1

Query: 361 RRTVSVQVFSGNHSAEFKKAIAEDDLPKTCRITDIFGFKRSRPL 230
           R    +  + G+H+    +++ + DLP TC+  +      S+P+
Sbjct: 193 REDTHLNTYDGSHTLRVSQSVCDPDLPYTCKAWNPVSQNSSQPV 236


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,938,179
Number of Sequences: 219361
Number of extensions: 1353926
Number of successful extensions: 3050
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3050
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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