Clone Name | rbastl38d01 |
---|---|
Clone Library Name | barley_pub |
>XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-)| Length = 915 Score = 34.7 bits (78), Expect = 0.058 Identities = 18/36 (50%), Positives = 23/36 (63%) Frame = -1 Query: 340 GEEDAVEGEKRGVTMEVGGLELPLGKSFTMTWNMHI 233 G ED E E + V +EV GLE+ +GK F M+W M I Sbjct: 881 GLED--EEENKSVMVEVRGLEMLVGKDFNMSWKMGI 914
>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response| factor 2) (ERF-2) Length = 492 Score = 30.8 bits (68), Expect = 0.84 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 264 FPSGNSSPPTSIVTPLFSPSTASSSPWCITCASAA 368 FPSG+ PP + +PL S S +P +C+SA+ Sbjct: 263 FPSGHHQPPGGLESPLLLDSPTSRTPPPPSCSSAS 297
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +3 Query: 3 RMQFHSPARLSFNG*IRVHKWCSRVTNPHTSYITDSSTMN 122 R F P LS WCSR+T+P++++ S +N Sbjct: 602 RNSFEDPCSLSVENENYARHWCSRLTDPNSAFSRCHSIIN 641
>CB024_RAT (Q6P7B2) Protein C2orf24 homolog| Length = 408 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +3 Query: 198 AEANAARFSYASMCMFHVMVKLFPSGNSSPPTSIVTP--LFSPSTASSSPWCITCASA 365 A ++ + ASM + H + L S + SPP + P L P + P C+T S+ Sbjct: 238 AYVSSVALAVASMAVIHQSLGLSSSPSPSPPELTLVPKNLLQPCIPAPVPQCLTNVSS 295
>ITPK1_HUMAN (Q13572) Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134)| (Inositol-triphosphate 5/6-kinase) (EC 2.7.1.-) (Inositol 1,3,4-trisphosphate 5/6-kinase) Length = 414 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 10/99 (10%) Frame = +2 Query: 5 NAVSFP--CKTELQWVNQSSQMVFEGNQ-------PPHKLHNRLKHDELLFKLYKFKLDT 157 N ++FP CKT + S +M NQ PP + N + H+ +L+K++ Sbjct: 148 NGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNAIQPPCVVQNFINHNAVLYKVFVVGESY 207 Query: 158 TTTSR-TKKAHADGSRGKCSSILLCFDVHVPRHGEALPQ 271 T R + K + G+ + S +V P L + Sbjct: 208 TVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTE 246
>Y1742_STRPN (Q97P99) UPF0348 protein SP1742| Length = 365 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 Query: 2 PNAVSFPCKTELQWVNQSSQMVFEGNQPPHKL 97 P+++S+P KT+ W + + + F GN P H L Sbjct: 125 PDSLSYPQKTQAMW-KEFAGLDFSGNTPNHVL 155
>Y1587_STRR6 (Q8DNR1) UPF0348 protein spr1587| Length = 365 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 Query: 2 PNAVSFPCKTELQWVNQSSQMVFEGNQPPHKL 97 P+++S+P KT+ W + + + F GN P H L Sbjct: 125 PDSLSYPQKTQAMW-KEFAGLDFSGNTPNHVL 155
>ITPK1_MOUSE (Q8BYN3) Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134)| (Inositol-triphosphate 5/6-kinase) (EC 2.7.1.-) (Inositol 1,3,4-trisphosphate 5/6-kinase) Length = 419 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 10/99 (10%) Frame = +2 Query: 5 NAVSFP--CKTELQWVNQSSQMVFEGNQ-------PPHKLHNRLKHDELLFKLYKFKLDT 157 N ++FP CKT + S +M NQ PP + N + H+ +L+K++ Sbjct: 148 NGLAFPFICKTRVAHGTNSHEMAIVFNQEGLNAIQPPCVVQNFINHNAVLYKVFVVGESY 207 Query: 158 TTTSR-TKKAHADGSRGKCSSILLCFDVHVPRHGEALPQ 271 T R + K + G+ + S +V P L + Sbjct: 208 TVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTE 246
>OTX2_XENLA (Q91813) Homeobox protein OTX2 (XOTX2) (Orthodenticle 2)| (Orthodenticle-A-like protein) Length = 288 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 270 SGNSSPPTSIVTPLFSPSTASSSPW 344 SG SPP+S P+ S STA S W Sbjct: 128 SGQFSPPSSTSVPVISSSTAPVSIW 152
>YBIB_ECOLI (P30177) Hypothetical protein ybiB| Length = 320 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -1 Query: 349 MHQGEEDAVEGEKRGVTMEVGGLELPLGKSFTMTWNMHI 233 +H G+ A E + V M VG PL K M W M + Sbjct: 139 LHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGV 177
>ITPK1_BOVIN (P0C0T1) Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134)| (Inositol-triphosphate 5/6-kinase) (EC 2.7.1.-) (Inositol 1,3,4-trisphosphate 5/6-kinase) Length = 419 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 9/54 (16%) Frame = +2 Query: 5 NAVSFP--CKTELQWVNQSSQMVFEGNQ-------PPHKLHNRLKHDELLFKLY 139 N ++FP CKT + S +M NQ PP + N + H+ +L+K++ Sbjct: 148 NGLAFPFICKTRVAHGTNSHEMAIVFNQEGLSAIQPPCVVQNFINHNAVLYKVF 201
>TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA box-binding| protein-associated factor 2S) (Transcription factor CA150) Length = 1098 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +3 Query: 189 QTEAEANAARFSYASM-CMFHVMVKLFPSGNSSPPTSIVTPLFSPSTASSSP 341 Q +A+A A + A + V+ G S+P TS P S ST+SS+P Sbjct: 228 QAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTP 279
>END3_YEAST (P39013) Protein END3| Length = 349 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +2 Query: 65 VFEGNQPPHKLHNRLKHDELLFKLYKFKLDTTTTSR 172 +F G +P + N++ HD++L LY KLD++ ++ Sbjct: 15 IFSGLKP---IENKVNHDQVLPILYNSKLDSSVLNK 47
>PCSK4_RAT (Q78EH2) Proprotein convertase subtilisin/kexin type 4 precursor| (EC 3.4.21.-) (PC4) (Neuroendocrine convertase 3) (NEC 3) (Prohormone convertase 3) (KEX2-like endoprotease 3) Length = 678 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%) Frame = +3 Query: 261 LFPS---GNSSPPTSIVTPLFSPSTASSSPWCITC 356 LFP+ G++S P ++PL + S PWC C Sbjct: 644 LFPAPHAGSASEPLQGLSPLAAILAISLGPWCCPC 678
>IF2_PORGI (Q7MXE4) Translation initiation factor IF-2| Length = 979 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = -1 Query: 331 DAVEGEKRGVTMEVG--GLELPLGKSFT 254 + +EGE G+T +G GL+LP G+ T Sbjct: 504 NVIEGEAGGITQHIGAYGLKLPSGRRIT 531
>PCDH8_HUMAN (O95206) Protocadherin-8 precursor (Arcadlin)| Length = 1070 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 Query: 276 NSSPPTSIVTPLFSPSTASSSPWCITCASAA 368 N + P +TPL +P ++SP+ A+AA Sbjct: 348 NDNAPDIAITPLAAPGAPATSPFAAAAAAAA 378 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,037,387 Number of Sequences: 219361 Number of extensions: 714787 Number of successful extensions: 2852 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2546 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2848 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)