ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38c10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NALP5_MOUSE (Q9R1M5) NACHT-, LRR- and PYD-containing protein 5 (... 28 7.8
2Y4KT_RHISN (P55538) Hypothetical protein y4kT 28 7.8

>NALP5_MOUSE (Q9R1M5) NACHT-, LRR- and PYD-containing protein 5 (Maternal antigen|
            that embryos require) (Mater protein) (Ooplasm-specific
            protein 1) (OP1)
          Length = 1111

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 192  TYCRGARYGTRRPSRLGLFVCCCC*GACEAIVVSLCC 82
            T C G +  +    RLGL  C      CEA+ +++ C
Sbjct: 995  TLCEGLKQSSSSLRRLGLGACKLTSNCCEALSLAISC 1031



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>Y4KT_RHISN (P55538) Hypothetical protein y4kT|
          Length = 516

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/42 (33%), Positives = 16/42 (38%)
 Frame = -2

Query: 166 HSAALPARFVCXXXXXXXXXGYCCKPLLHLYK*HVTWPFCIC 41
           H A LP R  C              PLLH ++   TWP   C
Sbjct: 144 HPALLPLRQACLVKLGAVATLPSGHPLLHSWEAWGTWPTAAC 185


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.129    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,083,785
Number of Sequences: 219361
Number of extensions: 653827
Number of successful extensions: 1587
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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