ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LACC_ENTFA (Q833W9) Tagatose-6-phosphate kinase (EC 2.7.1.144) (... 33 0.29
2CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx3... 33 0.37
3MET16_EMENI (P56859) Phosphoadenosine phosphosulfate reductase (... 32 0.83
4CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 pr... 32 0.83
5NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK ... 30 2.4
6YO81_CAEEL (P34617) Hypothetical GTP-binding protein ZK1236.1 in... 30 2.4
7PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs) 30 3.2
8Y1044_HELPY (O25685) Hypothetical metallophosphoesterase HP1044 ... 29 7.1
9DSBB_XANCP (Q8PC32) Disulfide bond formation protein B (Disulfid... 29 7.1
10DSBB_XANAC (Q8PNQ6) Disulfide bond formation protein B (Disulfid... 29 7.1
11PSF2_SCHPO (O94329) Probable DNA replication complex GINS protei... 29 7.1
12PHX2A_RAT (Q62782) Paired mesoderm homeobox protein 2A (Paired-l... 29 7.1
13WEE1_RAT (Q63802) Wee1-like protein kinase (EC 2.7.10.2) 29 7.1
14CPSKS_PHASA (O13284) Ent-kaurene synthase (EC 4.2.3.19) (EC 5.5.... 28 9.2
15BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 28 9.2
16VID21_YARLI (Q6C7K8) Chromatin modification-related protein VID21 28 9.2

>LACC_ENTFA (Q833W9) Tagatose-6-phosphate kinase (EC 2.7.1.144)|
           (Phosphotagatokinase)
          Length = 313

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 9/52 (17%)
 Frame = -3

Query: 266 DSLRKVMQHPW----VQRNPEEMECLLGE-----PSSMVSSTITSAEYFSIE 138
           DSLR+V+Q PW    ++ N EE+E LLG+     P + V + +T   +  IE
Sbjct: 167 DSLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIE 218



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>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast|
           precursor (EC 2.7.11.1)
          Length = 419

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = -3

Query: 410 NKLEEILDDDIKNXXXXXXXXXXXELAMRCLEMCGDNRPSMKEVADKLDSLR 255
           +++++I+D  IK             + + C+E    NRP MKEV + L+ ++
Sbjct: 318 HRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLEHIQ 369



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>MET16_EMENI (P56859) Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8)|
           (PAPS reductase, thioredoxin dependent) (PAdoPS
           reductase) (3'-phosphoadenylylsulfate reductase)
          Length = 293

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 243 LHHLPQTIKLVRNFLHRWPIVTTHL*AP 326
           LHH P+T+KLV N   R+P+   H+  P
Sbjct: 104 LHHFPETLKLVDNVRKRYPLQHIHVYKP 131



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>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC|
            2.7.11.1)
          Length = 901

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
 Frame = -3

Query: 419  MKVNKLEEILDDDIKNXXXXXXXXXXXELAMRCLEMCGDNRPSMKEVADKLD-SLRKVMQ 243
            +K   +  ILD  +              +A +C+ M G +RPSM +V   L+ +L  +M 
Sbjct: 728  IKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTALEHALALLMG 787

Query: 242  HPWVQRNPEEMECLLGEPSSMVSSTITSAEYFSIEKKAVNGLQSG 108
             P +++     E +LG  S M   +  S+ +   E +  +G   G
Sbjct: 788  SPCIEQPILPTEVVLGS-SRMHKVSQMSSNHSCSENELADGEDQG 831



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>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)|
          Length = 389

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 14/70 (20%), Positives = 30/70 (42%)
 Frame = -3

Query: 425 YAMKVNKLEEILDDDIKNXXXXXXXXXXXELAMRCLEMCGDNRPSMKEVADKLDSLRKVM 246
           Y     +L  ++D  ++             LA+ C+ +   +RP+M E+   ++ L    
Sbjct: 298 YLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEELHIQK 357

Query: 245 QHPWVQRNPE 216
           +    Q+NP+
Sbjct: 358 EASKEQQNPQ 367



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>YO81_CAEEL (P34617) Hypothetical GTP-binding protein ZK1236.1 in chromosome|
           III
          Length = 645

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -3

Query: 416 KVNKLEEILDDDIKNXXXXXXXXXX-XELAMRCLEMCGDNRPSMKEVADKLDSLRK 252
           K+  L E   D I+N             LA R LEMCG   P  K++ DKL   R+
Sbjct: 30  KLVNLSEFTPDKIRNFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85



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>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = +2

Query: 191 APQVGIPSLQGSAAPM--DVASPSSDYQACPQL-PSSMAYCHHTSLSTASLAPPPL 349
           A ++G+P+   S  P    VAS S    A P L P+S A    TS+ T+S APP +
Sbjct: 430 AGRLGVPTSMQSNGPSVSSVASSSVPSPATPTLTPTSTATSMSTSVPTSSPAPPAM 485



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>Y1044_HELPY (O25685) Hypothetical metallophosphoesterase HP1044 (EC 3.1.-.-)|
          Length = 370

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +3

Query: 24  FILFLMQLTFFAFEYKINKAKQ*CDYLTT*LQTINSFL 137
           FI+F++ L+F+ F Y I K     D+L +  +++ +FL
Sbjct: 73  FIIFILSLSFYGFSYSIEK----IDFLHSRRKSLKNFL 106



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>DSBB_XANCP (Q8PC32) Disulfide bond formation protein B (Disulfide|
           oxidoreductase)
          Length = 172

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 245 QHPWVQRNPEEMECLLGEPSSMVSSTITSAEYF 147
           +H WVQ  P++M    G P S +S T+   E F
Sbjct: 89  RHVWVQIRPKDMMSSCGPPLSFLSETMGPFEVF 121



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>DSBB_XANAC (Q8PNQ6) Disulfide bond formation protein B (Disulfide|
           oxidoreductase)
          Length = 172

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 245 QHPWVQRNPEEMECLLGEPSSMVSSTITSAEYF 147
           +H WVQ  P++M    G P S +S T+   E F
Sbjct: 89  RHVWVQIRPKDMMSSCGPPLSFLSETMGPFEVF 121



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>PSF2_SCHPO (O94329) Probable DNA replication complex GINS protein psf2|
          Length = 183

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = -3

Query: 419 MKVNKLEEILDDDIKNXXXXXXXXXXXELAMRCLEMCGDNRPSMKEVADKLDSLRKVMQ 243
           M++ KLE I DD+++N           E A   L  C D+   ++++   L  +R+  Q
Sbjct: 76  MEIGKLENIRDDELENETFSELPFRWLETAHLLLNFCADDIEDVEDIRRILLDIREARQ 134



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>PHX2A_RAT (Q62782) Paired mesoderm homeobox protein 2A (Paired-like homeobox|
           2A) (Aristaless homeobox protein homolog) (ARIX1
           homeodomain protein)
          Length = 281

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 15/28 (53%), Positives = 16/28 (57%)
 Frame = +2

Query: 287 SSMAYCHHTSLSTASLAPPPLQ*FLCSP 370
           S  + C HT  STASL PPP    L SP
Sbjct: 177 SKESTCSHTPDSTASLPPPPPAPSLASP 204



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>WEE1_RAT (Q63802) Wee1-like protein kinase (EC 2.7.10.2)|
          Length = 646

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/51 (37%), Positives = 29/51 (56%)
 Frame = -3

Query: 281 VADKLDSLRKVMQHPWVQRNPEEMECLLGEPSSMVSSTITSAEYFSIEKKA 129
           ++ +L  L KVM HP  +R P  M  +L + S ++S++  SAE   IE  A
Sbjct: 537 LSQELTELLKVMIHPDPERRPSAM--VLVKHSVLLSASRKSAEQLRIELNA 585



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>CPSKS_PHASA (O13284) Ent-kaurene synthase (EC 4.2.3.19) (EC 5.5.1.13)|
           (Ent-copalyl diphosphate synthase) (CPS/KS) (FCPS/KS)
          Length = 946

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = +1

Query: 109 PDCRPLTAF-----FSMLKYSALVIVELTIDEGSPSRHSISSGFRCTHG 240
           P   P T F      S L  S   + +L  DE S   ++I+ GF C HG
Sbjct: 260 PGTYPTTYFELNWVLSTLMKSGFTLSDLECDELSSIANTIAEGFECDHG 308



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = -3

Query: 419 MKVNKLEEILDDDIKNXXXXXXXXXXXELAMRCLEMCGDNRPSMKEVADKLDSLRKVMQH 240
           +K  KLE ++D D++            ++A+ C +     RP M EV   L+     +  
Sbjct: 513 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG--DGLAE 570

Query: 239 PWVQRNPEEM 210
            W +   EEM
Sbjct: 571 RWEEWQKEEM 580



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>VID21_YARLI (Q6C7K8) Chromatin modification-related protein VID21|
          Length = 967

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 216 FRVPLHPWMLHHLPQTIKLVRNFLHRWPIVTTHL 317
           FR P   W+L    Q ++LV+ + + W IV+ H+
Sbjct: 467 FRTPTM-WLLADDSQLLRLVKEYSYNWDIVSAHM 499


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,116,348
Number of Sequences: 219361
Number of extensions: 1083387
Number of successful extensions: 3017
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3012
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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