ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
2dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
3dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
4dbj|AK073972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
5gb|AC116520.14| Mus musculus chromosome 15, clone RP24-340J12, c... 46 0.088
6gb|AC116393.10| Mus musculus chromosome 15, clone RP23-94I16, co... 46 0.088
7gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, com... 44 0.35
8gb|AE006125.1| Pasteurella multocida subsp. multocida str. Pm70 ... 44 0.35
9emb|BX323838.4| Human DNA sequence from clone WI2-80922G11 on ch... 44 0.35
10gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, com... 44 0.35
11gb|AC110734.9| Mus musculus chromosome 1, clone RP24-113C15, com... 42 1.4
12ref|NM_033631.2| Homo sapiens leucine zipper protein 1 (LUZP1), ... 42 1.4
13emb|CT010577.7| Mouse DNA sequence from clone RP23-318D14 on chr... 42 1.4
14emb|AL031428.9|HS184J9 Human DNA sequence from clone RP1-184J9 o... 42 1.4
15gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.4
16gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 42 1.4
17gb|AC090196.5| Homo sapiens chromosome 8, clone RP11-766A10, com... 42 1.4
18dbj|AK025345.1| Homo sapiens cDNA: FLJ21692 fis, clone COL09588 42 1.4
19dbj|AK000297.1| Homo sapiens cDNA FLJ20290 fis, clone HEP04540 42 1.4
20gb|AC147820.2| Xenopus tropicalis clone CH216-11B22, complete se... 42 1.4
21emb|AL831896.1|HSM803222 Homo sapiens mRNA; cDNA DKFZp547N028 (f... 42 1.4
22gb|AC122006.3| Mus musculus BAC clone RP24-344B12 from chromosom... 40 5.4
23ref|XM_982067.1| PREDICTED: Mus musculus gene model 969, (NCBI) ... 40 5.4
24ref|XM_355166.3| PREDICTED: Mus musculus gene model 969, (NCBI) ... 40 5.4
25ref|XM_846095.1| PREDICTED: Canis familiaris similar to CTD (car... 40 5.4
26ref|XM_858158.1| PREDICTED: Canis familiaris similar to CTD (car... 40 5.4
27gb|AC135188.2| Mus musculus BAC clone RP23-206P4 from chromosome... 40 5.4
28emb|CR932998.12| Zebrafish DNA sequence from clone DKEY-111I23 i... 40 5.4
29gb|AC126679.2| Mus musculus BAC clone RP24-319J7 from chromosome... 40 5.4
30gb|AC127264.4| Mus musculus BAC clone RP24-336J13 from chromosom... 40 5.4
31emb|CR749176.14| Zebrafish DNA sequence from clone DKEY-43B13 in... 40 5.4
32emb|CR318664.15| Zebrafish DNA sequence from clone CH211-59L22 i... 40 5.4
33gb|AF235104.5| Homo sapiens chromosome 8 clone GS1-251I7 map p21... 40 5.4
34gb|AF233390.5| Homo sapiens chromosome 8 clone GS1-251I7 map p21... 40 5.4
35emb|BX640548.14| Zebrafish DNA sequence from clone CH211-198E12 ... 40 5.4
36emb|BX927397.10| Zebrafish DNA sequence from clone DKEY-87H7 in ... 40 5.4
37gb|AC013643.10| Homo sapiens chromosome 8, clone RP11-16P20, com... 40 5.4
38emb|AL808027.14| Mouse DNA sequence from clone RP23-161B9 on chr... 40 5.4
39gb|AC009535.9| Drosophila melanogaster, chromosome 2R, region 54... 40 5.4
40ref|XM_219988.3| PREDICTED: Rattus norvegicus similar to CG5882-... 40 5.4
41emb|AL954309.11| Zebrafish DNA sequence from clone CH211-213D2 i... 40 5.4
42gb|BC057135.1| Mus musculus gene model 969, (NCBI), mRNA (cDNA c... 40 5.4
43gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47... 40 5.4
44dbj|AP006105.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 5.4
45gb|AC172106.1| Mus musculus BAC clone RP23-395K8 from chromosome... 40 5.4 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 337      ttgctgtacaggtcctgctggaaacaactaatgatg 372
                ||||||||||| |||||||| |||||||||||||||
Sbjct: 30334991 ttgctgtacagatcctgctgcaaacaactaatgatg 30335026
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>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0072H09
          Length = 160541

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 337   ttgctgtacaggtcctgctggaaacaactaatgatg 372
             ||||||||||| |||||||| |||||||||||||||
Sbjct: 15851 ttgctgtacagatcctgctgcaaacaactaatgatg 15886
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>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1121A12
          Length = 138796

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                  
Query: 337    ttgctgtacaggtcctgctggaaacaactaatgatg 372
              ||||||||||| |||||||| |||||||||||||||
Sbjct: 135908 ttgctgtacagatcctgctgcaaacaactaatgatg 135943
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>dbj|AK073972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072J21, full
            insert sequence
          Length = 2639

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 337  ttgctgtacaggtcctgctggaaacaactaatgatg 372
            ||||||||||| |||||||| |||||||||||||||
Sbjct: 2282 ttgctgtacagatcctgctgcaaacaactaatgatg 2247
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>gb|AC116520.14| Mus musculus chromosome 15, clone RP24-340J12, complete sequence
          Length = 149118

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 366  aatgatgtttcctgtcttccact 388
            |||||||||||||||||||||||
Sbjct: 4211 aatgatgtttcctgtcttccact 4189
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>gb|AC116393.10| Mus musculus chromosome 15, clone RP23-94I16, complete sequence
          Length = 217156

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 366    aatgatgtttcctgtcttccact 388
              |||||||||||||||||||||||
Sbjct: 195312 aatgatgtttcctgtcttccact 195290
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>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence
          Length = 248540

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 371    tgtttcctgtcttccactctct 392
              ||||||||||||||||||||||
Sbjct: 232870 tgtttcctgtcttccactctct 232891
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>gb|AE006125.1| Pasteurella multocida subsp. multocida str. Pm70 section 92 of 204 of
            the complete genome
          Length = 10029

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 151  ttgccgtgtcatcttttattgt 172
            ||||||||||||||||||||||
Sbjct: 4015 ttgccgtgtcatcttttattgt 4036
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>emb|BX323838.4| Human DNA sequence from clone WI2-80922G11 on chromosome X Contains a
             CpG island, complete sequence
          Length = 28044

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 96    aaggcagagaagacaaaagggggaaagaga 125
             |||| |||||||||||||||| ||||||||
Sbjct: 17702 aaggtagagaagacaaaagggtgaaagaga 17673
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>gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, complete sequence
          Length = 175716

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 371    tgtttcctgtcttccactctct 392
              ||||||||||||||||||||||
Sbjct: 152348 tgtttcctgtcttccactctct 152327
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>gb|AC110734.9| Mus musculus chromosome 1, clone RP24-113C15, complete sequence
          Length = 134073

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 101   agagaagacaaaagggggaaagaga 125
             |||||||| ||||||||||||||||
Sbjct: 52077 agagaagagaaaagggggaaagaga 52101
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>ref|NM_033631.2| Homo sapiens leucine zipper protein 1 (LUZP1), mRNA
          Length = 7555

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 92   agtgaaggcagagaagacaaa 112
            |||||||||||||||||||||
Sbjct: 5505 agtgaaggcagagaagacaaa 5485
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>emb|CT010577.7| Mouse DNA sequence from clone RP23-318D14 on chromosome 14, complete
             sequence
          Length = 195351

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 233   cccttctttctttgtacaattcatc 257
             |||||||||||||||| ||||||||
Sbjct: 86686 cccttctttctttgtagaattcatc 86710
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>emb|AL031428.9|HS184J9 Human DNA sequence from clone RP1-184J9 on chromosome 1p35.1-36.12
             Contains the 5' end of a novel gene, the gene for a novel
             protein (KIAA0601), a novel gene and the 5' end of the
             LUZP1 gene for leucine zipper protein 1, complete sequence
          Length = 100951

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    agtgaaggcagagaagacaaa 112
             |||||||||||||||||||||
Sbjct: 25415 agtgaaggcagagaagacaaa 25395
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 26      tgtgaagacaacatgacactg 46
               |||||||||||||||||||||
Sbjct: 2521703 tgtgaagacaacatgacactg 2521683
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 133    cttacatctcaaaaaacattg 153
              |||||||||||||||||||||
Sbjct: 651001 cttacatctcaaaaaacattg 651021
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>gb|AC090196.5| Homo sapiens chromosome 8, clone RP11-766A10, complete sequence
          Length = 175708

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 108   acaaaagggggaaagagaatcaaaa 132
             ||||||||| |||||||||||||||
Sbjct: 72220 acaaaagggagaaagagaatcaaaa 72196
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>dbj|AK025345.1| Homo sapiens cDNA: FLJ21692 fis, clone COL09588
          Length = 3453

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 92   agtgaaggcagagaagacaaa 112
            |||||||||||||||||||||
Sbjct: 1406 agtgaaggcagagaagacaaa 1386
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>dbj|AK000297.1| Homo sapiens cDNA FLJ20290 fis, clone HEP04540
          Length = 2262

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 92  agtgaaggcagagaagacaaa 112
           |||||||||||||||||||||
Sbjct: 220 agtgaaggcagagaagacaaa 200
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>gb|AC147820.2| Xenopus tropicalis clone CH216-11B22, complete sequence
          Length = 65937

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 329   gcaggtttttgctgtacaggt 349
             |||||||||||||||||||||
Sbjct: 32578 gcaggtttttgctgtacaggt 32558
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>emb|AL831896.1|HSM803222 Homo sapiens mRNA; cDNA DKFZp547N028 (from clone DKFZp547N028)
          Length = 3604

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 92   agtgaaggcagagaagacaaa 112
            |||||||||||||||||||||
Sbjct: 1554 agtgaaggcagagaagacaaa 1534
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>gb|AC122006.3| Mus musculus BAC clone RP24-344B12 from chromosome 16, complete
             sequence
          Length = 156395

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   aaaagggggaaagagaatcaaaac 133
             |||||||| |||||||||||||||
Sbjct: 50143 aaaaggggaaaagagaatcaaaac 50166
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>ref|XM_982067.1| PREDICTED: Mus musculus gene model 969, (NCBI) (Gm969), mRNA
          Length = 3345

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  caggtttttgctgtacaggt 349
            ||||||||||||||||||||
Sbjct: 1631 caggtttttgctgtacaggt 1612
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>ref|XM_355166.3| PREDICTED: Mus musculus gene model 969, (NCBI) (Gm969), mRNA
          Length = 3345

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  caggtttttgctgtacaggt 349
            ||||||||||||||||||||
Sbjct: 1631 caggtttttgctgtacaggt 1612
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>ref|XM_846095.1| PREDICTED: Canis familiaris similar to CTD (carboxy-terminal domain,
            RNA polymerase II, polypeptide A) small phosphatase 1
            isoform 2, transcript variant 1 (LOC608466), mRNA
          Length = 1777

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  agagaagacaaaagggggaa 120
            ||||||||||||||||||||
Sbjct: 1184 agagaagacaaaagggggaa 1165
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>ref|XM_858158.1| PREDICTED: Canis familiaris similar to CTD (carboxy-terminal domain,
            RNA polymerase II, polypeptide A) small phosphatase 1
            isoform 2, transcript variant 2 (LOC608466), mRNA
          Length = 1854

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  agagaagacaaaagggggaa 120
            ||||||||||||||||||||
Sbjct: 1261 agagaagacaaaagggggaa 1242
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>gb|AC135188.2| Mus musculus BAC clone RP23-206P4 from chromosome 14, complete sequence
          Length = 182464

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    atcaaaacttacatctcaaa 145
              ||||||||||||||||||||
Sbjct: 127365 atcaaaacttacatctcaaa 127384
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>emb|CR932998.12| Zebrafish DNA sequence from clone DKEY-111I23 in linkage group 9,
             complete sequence
          Length = 218171

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   tagatgatggctacactatg 312
             ||||||||||||||||||||
Sbjct: 99713 tagatgatggctacactatg 99694
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>gb|AC126679.2| Mus musculus BAC clone RP24-319J7 from chromosome 19, complete sequence
          Length = 172299

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   caggtttttgctgtacaggt 349
             ||||||||||||||||||||
Sbjct: 26621 caggtttttgctgtacaggt 26640
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>gb|AC127264.4| Mus musculus BAC clone RP24-336J13 from chromosome 19, complete sequence
          Length = 169256

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    caggtttttgctgtacaggt 349
              ||||||||||||||||||||
Sbjct: 125632 caggtttttgctgtacaggt 125651
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>emb|CR749176.14| Zebrafish DNA sequence from clone DKEY-43B13 in linkage group 19,
             complete sequence
          Length = 237649

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    aacaattttacaaactaaaa 89
             ||||||||||||||||||||
Sbjct: 88305 aacaattttacaaactaaaa 88286
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>emb|CR318664.15| Zebrafish DNA sequence from clone CH211-59L22 in linkage group 21,
             complete sequence
          Length = 161092

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   actaatgatgtttcctgtct 382
             ||||||||||||||||||||
Sbjct: 63135 actaatgatgtttcctgtct 63116
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>gb|AF235104.5| Homo sapiens chromosome 8 clone GS1-251I7 map p21-p11, complete
             sequence
          Length = 175380

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    gaaggcagagaagacaaaag 114
             ||||||||||||||||||||
Sbjct: 98084 gaaggcagagaagacaaaag 98103
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>gb|AF233390.5| Homo sapiens chromosome 8 clone GS1-251I7 map p21-p11, complete
             sequence
          Length = 95005

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    gaaggcagagaagacaaaag 114
             ||||||||||||||||||||
Sbjct: 82551 gaaggcagagaagacaaaag 82570
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>emb|BX640548.14| Zebrafish DNA sequence from clone CH211-198E12 in linkage group 11,
              complete sequence
          Length = 231587

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     aacaattttacaaactaaaa 89
              ||||||||||||||||||||
Sbjct: 215281 aacaattttacaaactaaaa 215300
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>emb|BX927397.10| Zebrafish DNA sequence from clone DKEY-87H7 in linkage group 7, complete
              sequence
          Length = 187890

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    tgtaccaacagtttacagaa 189
              ||||||||||||||||||||
Sbjct: 182039 tgtaccaacagtttacagaa 182058
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>gb|AC013643.10| Homo sapiens chromosome 8, clone RP11-16P20, complete sequence
          Length = 157324

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    gaaggcagagaagacaaaag 114
             ||||||||||||||||||||
Sbjct: 94592 gaaggcagagaagacaaaag 94611
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>emb|AL808027.14| Mouse DNA sequence from clone RP23-161B9 on chromosome 2, complete
              sequence
          Length = 241914

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 373    tttcctgtcttccactctct 392
              ||||||||||||||||||||
Sbjct: 174152 tttcctgtcttccactctct 174133
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>gb|AC009535.9| Drosophila melanogaster, chromosome 2R, region 54B-54B, BAC clone
             BACR28O12, complete sequence
          Length = 161244

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   tggctacactatgttgtttg 319
             ||||||||||||||||||||
Sbjct: 99710 tggctacactatgttgtttg 99691
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>ref|XM_219988.3| PREDICTED: Rattus norvegicus similar to CG5882-PA (predicted)
            (LOC309467), mRNA
          Length = 3341

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  caggtttttgctgtacaggt 349
            ||||||||||||||||||||
Sbjct: 1630 caggtttttgctgtacaggt 1611
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>emb|AL954309.11| Zebrafish DNA sequence from clone CH211-213D2 in linkage group 8,
             complete sequence
          Length = 209195

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   tgtaccaacagtttacagaa 189
             ||||||||||||||||||||
Sbjct: 88914 tgtaccaacagtttacagaa 88933
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>gb|BC057135.1| Mus musculus gene model 969, (NCBI), mRNA (cDNA clone IMAGE:6312340),
            containing frame-shift errors
          Length = 3395

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  caggtttttgctgtacaggt 349
            ||||||||||||||||||||
Sbjct: 1629 caggtttttgctgtacaggt 1610
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>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete
              sequence
          Length = 290783

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    tggctacactatgttgtttg 319
              ||||||||||||||||||||
Sbjct: 119728 tggctacactatgttgtttg 119709
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>dbj|AP006105.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT14C19, TM0190,
             complete sequence
          Length = 125299

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   aacaactaatgatgtttcct 378
             ||||||||||||||||||||
Sbjct: 20928 aacaactaatgatgtttcct 20947
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>gb|AC172106.1| Mus musculus BAC clone RP23-395K8 from chromosome 16, complete sequence
          Length = 191119

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 110   aaaagggggaaagagaatcaaaac 133
             |||||||| |||||||||||||||
Sbjct: 36031 aaaaggggaaaagagaatcaaaac 36008


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,048,652
Number of Sequences: 3902068
Number of extensions: 5048652
Number of successful extensions: 102865
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102764
Number of HSP's gapped (non-prelim): 101
length of query: 406
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 384
effective length of database: 17,147,199,772
effective search space: 6584524712448
effective search space used: 6584524712448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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