ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl38b09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY518220.1| Oryza sativa (indica cultivar-group) NBS-LRR-like protein A (NL-A), NBS-LRR-like protein B (NL-B), NBS-LRR-like protein C (NL-C), and NBS-LRR-like protein D (NL-D) genes, complete cds Length = 73617 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 282 cagactacagaaactctagatcttcctcctgctgctccagaacaactgtggcaagtgccc 341 ||||||| ||||||| || || ||||| ||||||||||| |||| ||| || ||||| | Sbjct: 70436 cagactagagaaacttaaggtcatcctcttgctgctccaggacaattgttgccagtgctc 70495 Query: 342 gtcgatacgctgctgatctagcgttcctgacaagaacacagat 384 |||| || || |||||||| || ||||| ||||| |||||||| Sbjct: 70496 gtcggtatgccgctgatcttgcattcctaacaaggacacagat 70538
>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0023F01, complete sequence Length = 145009 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 282 cagactacagaaactctagatcttcctcctgctgctccagaacaactgtggcaagtgccc 341 ||||||| ||||||| || || ||||| ||||||||||| |||| ||| || ||||| | Sbjct: 95781 cagactagagaaacttaaggtcatcctcttgctgctccaggacaattgttgccagtgctc 95722 Query: 342 gtcgatacgctgctgatctagcgttcctgacaagaacacagat 384 |||| || || |||||||| || ||||| ||||| |||||||| Sbjct: 95721 gtcggtatgccgctgatcttgcattcctaacaaggacacagat 95679 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 282 cagactacagaaactctagatcttcctcctgctgctccagaacaactgtggcaagtgccc 341 ||||||| ||||||| || || ||||| ||||||||||| |||| ||| || ||||| | Sbjct: 80841 cagactagagaaacttaaggtcatcctcttgctgctccaggacaattgttgcgagtgctc 80782 Query: 342 gtcgatacgctgctgatctagcgttcctgacaagaacacagat 384 |||| || || |||||||| || ||||| ||||| |||||||| Sbjct: 80781 gtcggtatgccgctgatcttgcattccttacaaggacacagat 80739
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 282 cagactacagaaactctagatcttcctcctgctgctccagaacaactgtggcaagtgccc 341 ||||||| ||||||| || || ||||| ||||||||||| |||| ||| || ||||| | Sbjct: 26508879 cagactagagaaacttaaggtcatcctcttgctgctccaggacaattgttgcgagtgctc 26508938 Query: 342 gtcgatacgctgctgatctagcgttcctgacaagaacacagat 384 |||| || || |||||||| || ||||| ||||| |||||||| Sbjct: 26508939 gtcggtatgccgctgatcttgcattccttacaaggacacagat 26508981 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 282 cagactacagaaactctagatcttcctcctgctgctccagaacaactgtggcaagtgccc 341 ||||||| ||||||| || || ||||| ||||||||||| |||| ||| || ||||| | Sbjct: 26493939 cagactagagaaacttaaggtcatcctcttgctgctccaggacaattgttgccagtgctc 26493998 Query: 342 gtcgatacgctgctgatctagcgttcctgacaagaacacagat 384 |||| || || |||||||| || ||||| ||||| |||||||| Sbjct: 26493999 gtcggtatgccgctgatcttgcattcctaacaaggacacagat 26494041
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 282 cagactacagaaactctagatcttcctcctgctgctccagaacaactgtggcaagtgccc 341 ||||||| ||||||| || || ||||| ||||||||||| |||| ||| || ||||| | Sbjct: 26834143 cagactagagaaacttaaggtcatcctcttgctgctccaggacaattgttgcgagtgctc 26834202 Query: 342 gtcgatacgctgctgatctagcgttcctgacaagaacacagat 384 |||| || || |||||||| || ||||| ||||| |||||||| Sbjct: 26834203 gtcggtatgccgctgatcttgcattccttacaaggacacagat 26834245 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 282 cagactacagaaactctagatcttcctcctgctgctccagaacaactgtggcaagtgccc 341 ||||||| ||||||| || || ||||| ||||||||||| |||| ||| || ||||| | Sbjct: 26819203 cagactagagaaacttaaggtcatcctcttgctgctccaggacaattgttgccagtgctc 26819262 Query: 342 gtcgatacgctgctgatctagcgttcctgacaagaacacagat 384 |||| || || |||||||| || ||||| ||||| |||||||| Sbjct: 26819263 gtcggtatgccgctgatcttgcattcctaacaaggacacagat 26819305
>gb|AC131154.2| Homo sapiens 3 BAC RP13-489G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 189348 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 370 gacaagaacacagatctcctgacccag 396 |||||||||||||||| |||||||||| Sbjct: 173792 gacaagaacacagatcccctgacccag 173818
>emb|BX649229.2| Chicken DNA sequence from clone WAG-41C10, complete sequence Length = 147869 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 369 tgacaagaacacagatctcctga 391 ||||||||||||||||||||||| Sbjct: 131433 tgacaagaacacagatctcctga 131455
>gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence Length = 257036 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ttttctcaataaaatgtgggt 87 ||||||||||||||||||||| Sbjct: 66808 ttttctcaataaaatgtgggt 66828
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 aaaaattactttcatgcatct 214 ||||||||||||||||||||| Sbjct: 20300 aaaaattactttcatgcatct 20280 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 acagttttctcaataaaatg 82 |||||||||||||||||||| Sbjct: 1564637 acagttttctcaataaaatg 1564656
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 aaaaattactttcatgcatct 214 ||||||||||||||||||||| Sbjct: 20307 aaaaattactttcatgcatct 20287 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 acagttttctcaataaaatg 82 |||||||||||||||||||| Sbjct: 1613966 acagttttctcaataaaatg 1613985
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 aaaaattactttcatgcatct 214 ||||||||||||||||||||| Sbjct: 18409 aaaaattactttcatgcatct 18389
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 aaaaattactttcatgcatct 214 ||||||||||||||||||||| Sbjct: 20323 aaaaattactttcatgcatct 20303 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 acagttttctcaataaaatg 82 |||||||||||||||||||| Sbjct: 1579068 acagttttctcaataaaatg 1579087
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 aaaaattactttcatgcatct 214 ||||||||||||||||||||| Sbjct: 20296 aaaaattactttcatgcatct 20276 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 acagttttctcaataaaatg 82 |||||||||||||||||||| Sbjct: 1518449 acagttttctcaataaaatg 1518468
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 aaaaattactttcatgcatct 214 ||||||||||||||||||||| Sbjct: 20323 aaaaattactttcatgcatct 20303 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 acagttttctcaataaaatg 82 |||||||||||||||||||| Sbjct: 1601889 acagttttctcaataaaatg 1601908
>gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosome 12, complete sequence Length = 156014 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ttttctcaataaaatgtgggt 87 ||||||||||||||||||||| Sbjct: 96949 ttttctcaataaaatgtgggt 96969
>dbj|AK032198.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430411K07 product:unclassifiable, full insert sequence Length = 3000 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ttttctcaataaaatgtgggt 87 ||||||||||||||||||||| Sbjct: 1220 ttttctcaataaaatgtgggt 1200
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 aatgtgttgccacttaccact 150 ||||||||||||||||||||| Sbjct: 11393642 aatgtgttgccacttaccact 11393622 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 14656480 tttaccgttttctcaataaaatgt 14656457 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 5900199 tttacggttttctcaataaaatgt 5900176
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 aaaaattactttcatgcatct 214 ||||||||||||||||||||| Sbjct: 20300 aaaaattactttcatgcatct 20280 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 acagttttctcaataaaatg 82 |||||||||||||||||||| Sbjct: 1584879 acagttttctcaataaaatg 1584898
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 aaaaattactttcatgcatct 214 ||||||||||||||||||||| Sbjct: 20306 aaaaattactttcatgcatct 20286 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 acagttttctcaataaaatg 82 |||||||||||||||||||| Sbjct: 1537554 acagttttctcaataaaatg 1537573
>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446G09 Length = 146898 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 aatgtgttgccacttaccact 150 ||||||||||||||||||||| Sbjct: 3162 aatgtgttgccacttaccact 3142
>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0656C04 Length = 143411 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 aatgtgttgccacttaccact 150 ||||||||||||||||||||| Sbjct: 94153 aatgtgttgccacttaccact 94133
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 aaaaattactttcatgcatct 214 ||||||||||||||||||||| Sbjct: 20288 aaaaattactttcatgcatct 20268 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 acagttttctcaataaaatg 82 |||||||||||||||||||| Sbjct: 1647382 acagttttctcaataaaatg 1647401
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 aaaaattactttcatgcatct 214 ||||||||||||||||||||| Sbjct: 20282 aaaaattactttcatgcatct 20262 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 acagttttctcaataaaatg 82 |||||||||||||||||||| Sbjct: 1488162 acagttttctcaataaaatg 1488181
>emb|AL840641.22| Zebrafish DNA sequence from clone DKEY-37O8, complete sequence Length = 177428 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 ctacagaaactctagatcttc 306 ||||||||||||||||||||| Sbjct: 59201 ctacagaaactctagatcttc 59221
>gb|BC053066.1| Mus musculus adaptor-related protein complex 3, delta 1 subunit, mRNA (cDNA clone MGC:62391 IMAGE:5704929), complete cds Length = 4806 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gtgcttgcagcaagttcttc 259 |||||||||||||||||||| Sbjct: 2905 gtgcttgcagcaagttcttc 2886
>ref|XM_421947.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 9430067K14 gene (LOC424092), mRNA Length = 5025 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 acaactcaaacatgttgcaa 195 |||||||||||||||||||| Sbjct: 5008 acaactcaaacatgttgcaa 4989
>ref|XM_870885.1| PREDICTED: Bos taurus similar to myosin, heavy polypeptide 7B, cardiac muscle, beta (LOC521764), mRNA Length = 6475 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 actctagatcttcctcctgctgctccag 321 |||| ||||||||| ||||||||||||| Sbjct: 3793 actccagatcttccacctgctgctccag 3766
>ref|NM_007460.1| Mus musculus adaptor-related protein complex 3, delta 1 subunit (Ap3d1), mRNA Length = 4730 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gtgcttgcagcaagttcttc 259 |||||||||||||||||||| Sbjct: 2889 gtgcttgcagcaagttcttc 2870
>gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0048F12, complete sequence Length = 139627 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 96057 tttacggttttctcaataaaatgt 96080
>gb|AC166937.2| Mus musculus BAC clone RP24-121A12 from chromosome 10, complete sequence Length = 183115 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gtgcttgcagcaagttcttc 259 |||||||||||||||||||| Sbjct: 172520 gtgcttgcagcaagttcttc 172501
>gb|AC152410.6| Mus musculus BAC clone RP24-290C21 from chromosome 10, complete sequence Length = 175812 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 gtgcttgcagcaagttcttc 259 |||||||||||||||||||| Sbjct: 138380 gtgcttgcagcaagttcttc 138399
>gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, complete sequence Length = 177958 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 tctgtcctttacagttttct 72 |||||||||||||||||||| Sbjct: 160057 tctgtcctttacagttttct 160038
>emb|CR376856.9| Zebrafish DNA sequence from clone CH211-11O22 in linkage group 9, complete sequence Length = 179053 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tcaaacatgttgcaaaaatt 200 |||||||||||||||||||| Sbjct: 133022 tcaaacatgttgcaaaaatt 133041
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 9157990 tttaccgttttctcaataaaatgt 9158013
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 25464003 tttacggttttctcaataaaatgt 25463980 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 25458632 tttacggttttctcaataaaatgt 25458609
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 11651622 tttacggttttctcaataaaatgt 11651645
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 22749742 tttactgttttctcaataaaatgt 22749765 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tttacagttttctcaataaaatgt 83 |||| ||||||||||||||||||| Sbjct: 8540038 tttagagttttctcaataaaatgt 8540061
>gb|AF469671.1|AF469670S2 Mus musculus transposon intracisternal A particle 3' long terminal repeat and truncated adaptor-related protein complex AP-3 delta subunit (Ap3d) mRNA, Ap3d-mh2J allele, partial sequence Length = 364 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gtgcttgcagcaagttcttc 259 |||||||||||||||||||| Sbjct: 336 gtgcttgcagcaagttcttc 317
>gb|AC090967.4| Staphylococcus aureus strain NCTC 8325 clone sabac-125, complete sequence Length = 27650 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 acagttttctcaataaaatg 82 |||||||||||||||||||| Sbjct: 20687 acagttttctcaataaaatg 20706
>gb|AC007557.3| Homo sapiens BAC clone RP11-53G8 from 2, complete sequence Length = 102382 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 aaactctagatcttcctcctgctg 315 |||||||||||||||||| ||||| Sbjct: 13427 aaactctagatcttcctcttgctg 13404
>gb|AF463835.1| Oryza sativa (japonica cultivar-group) transgenic plant p0822L integrated T-DNA(Ds), flanking sequence Length = 766 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttacagttttctcaataaaatgt 83 |||| ||||||||||||||||||| Sbjct: 73 tttagagttttctcaataaaatgt 50
>dbj|AK187726.1| Mus musculus cDNA, clone:Y0G0142N12, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000020420, based on BLAT search Length = 261 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gtgcttgcagcaagttcttc 259 |||||||||||||||||||| Sbjct: 205 gtgcttgcagcaagttcttc 186
>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0009N02 Length = 121142 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tttacagttttctcaataaaatgt 83 |||| ||||||||||||||||||| Sbjct: 9361 tttagagttttctcaataaaatgt 9384
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 138012 tttacggttttctcaataaaatgt 137989 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 132641 tttacggttttctcaataaaatgt 132618
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 42647 tttacggttttctcaataaaatgt 42624
>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0026I22 Length = 143302 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 49478 tttaccgttttctcaataaaatgt 49455
>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1559_F09 Length = 87792 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 74873 tttacggttttctcaataaaatgt 74850
>gb|AF118839.1|AF118839 Staphylococcus aureus iron uptake regulatory protein (fur) gene, complete cds; and site-specific recombinase (XerD) gene, partial cds Length = 1651 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 acagttttctcaataaaatg 82 |||||||||||||||||||| Sbjct: 206 acagttttctcaataaaatg 187
>emb|BX005146.4| Zebrafish DNA sequence from clone CH211-152N19 in linkage group 3, complete sequence Length = 180858 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 tcaaacatgttgcaaaaatt 200 |||||||||||||||||||| Sbjct: 144871 tcaaacatgttgcaaaaatt 144890
>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1113_G05 Length = 131445 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tttacagttttctcaataaaatgt 83 |||| ||||||||||||||||||| Sbjct: 89308 tttagagttttctcaataaaatgt 89331
>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046O12 Length = 128223 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 108538 tttactgttttctcaataaaatgt 108561
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tttacagttttctcaataaaatgt 83 ||||| |||||||||||||||||| Sbjct: 93484 tttaccgttttctcaataaaatgt 93507
>gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequence Length = 156330 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ttgcaaaaattactttcatg 209 |||||||||||||||||||| Sbjct: 94492 ttgcaaaaattactttcatg 94473
>gb|BC048786.1| Mus musculus adaptor-related protein complex 3, delta 1 subunit, mRNA (cDNA clone MGC:54776 IMAGE:6489789), complete cds Length = 4756 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gtgcttgcagcaagttcttc 259 |||||||||||||||||||| Sbjct: 2879 gtgcttgcagcaagttcttc 2860
>gb|AF095597.1|AF095597 Staphylococcus aureus strain ISP3 ferric uptake regulator homolog (furC) gene, complete cds Length = 600 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 acagttttctcaataaaatg 82 |||||||||||||||||||| Sbjct: 33 acagttttctcaataaaatg 14
>gb|AC004104.1|AC004104 Homo sapiens 12q24 PAC RPCI5-942N13 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 136037 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gaacacagatctcctgaccc 394 |||||||||||||||||||| Sbjct: 120080 gaacacagatctcctgaccc 120099
>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266, complete sequence Length = 113459 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aacatgttgcaaaaattact 203 |||||||||||||||||||| Sbjct: 89723 aacatgttgcaaaaattact 89742
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175, complete sequence Length = 108582 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aacatgttgcaaaaattact 203 |||||||||||||||||||| Sbjct: 40714 aacatgttgcaaaaattact 40733
>emb|AL935044.6| Zebrafish DNA sequence from clone CH211-190O19, complete sequence Length = 155612 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 tctagatcttcctcctgctgctcc 319 ||||||||||| |||||||||||| Sbjct: 90440 tctagatcttcatcctgctgctcc 90463
>emb|AL669981.11| Mouse DNA sequence from clone RP23-335B9 on chromosome 4, complete sequence Length = 222981 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tcttcctcctgctgctccag 321 |||||||||||||||||||| Sbjct: 155715 tcttcctcctgctgctccag 155734
>dbj|AB004305.1| Mus musculus mRNA for mBLVR, complete cds Length = 4730 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gtgcttgcagcaagttcttc 259 |||||||||||||||||||| Sbjct: 2889 gtgcttgcagcaagttcttc 2870 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,051,312 Number of Sequences: 3902068 Number of extensions: 4051312 Number of successful extensions: 78893 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78555 Number of HSP's gapped (non-prelim): 338 length of query: 420 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 398 effective length of database: 17,147,199,772 effective search space: 6824585509256 effective search space used: 6824585509256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
