Clone Name | rbastl38b07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RIMM_RHIME (Q92L42) Probable 16S rRNA-processing protein rimM | 28 | 8.5 |
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>RIMM_RHIME (Q92L42) Probable 16S rRNA-processing protein rimM| Length = 187 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -1 Query: 176 GVFTAMSDELMLFQLKKKSLRPLIIPFLTPWRIITIGI 63 GVF + +L+ +LK LRP++IPF T W ++ I + Sbjct: 122 GVFDFGAGDLL--ELKGPGLRPVLIPF-TEWSVLEIDL 156 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,689,241 Number of Sequences: 219361 Number of extensions: 437531 Number of successful extensions: 884 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 883 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 884 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)