Clone Name | rbastl38b07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_948594.1| Theileria annulata strain Ankara elongation factor 2 (TA16255) partial mRNA Length = 3681 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 tagttattattctccagggcgtcaa 95 |||| |||||||||||||||||||| Sbjct: 3193 tagtcattattctccagggcgtcaa 3169
>gb|AC073183.7| Homo sapiens BAC clone CTD-2021D19 from 7, complete sequence Length = 33844 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 atcatataccaatagttatta 79 ||||||||||||||||||||| Sbjct: 4651 atcatataccaatagttatta 4671
>emb|CT030572.1| Xenopus tropicalis finished cDNA, clone TNeu071k23 Length = 1750 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ctttgatataaaatcatata 66 |||||||||||||||||||| Sbjct: 762 ctttgatataaaatcatata 781
>emb|CR936364.7| M.truncatula DNA sequence from clone MTH2-193I1 on chromosome 3, complete sequence Length = 119364 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 ttgatataaaatcatataccaata 72 |||||| ||||||||||||||||| Sbjct: 13482 ttgataaaaaatcatataccaata 13505
>emb|AL392087.7| Human DNA sequence from clone RP11-454H24 on chromosome 10 Contains part of a novel gene (KIAA0534), complete sequence Length = 193980 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 catataccaatagttattat 80 |||||||||||||||||||| Sbjct: 182771 catataccaatagttattat 182790
>emb|X94357.1|SCHRVIILT S.cerevisiae left telomeric region from chromosome VII Length = 39411 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcaaaaaaggaattatgagc 111 |||||||||||||||||||| Sbjct: 20964 tcaaaaaaggaattatgagc 20983
>emb|X67787.1|SCFZF1 S.cerevisiae FZF1, HXK2 genes and ORF1 for zinc finger protein and hexokinase PII Length = 4430 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcaaaaaaggaattatgagc 111 |||||||||||||||||||| Sbjct: 716 tcaaaaaaggaattatgagc 735
>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome Length = 1512977 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tataaaatcatataccaata 72 |||||||||||||||||||| Sbjct: 1484167 tataaaatcatataccaata 1484186
>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome Length = 1499920 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tataaaatcatataccaata 72 |||||||||||||||||||| Sbjct: 1470517 tataaaatcatataccaata 1470536
>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome Length = 1516355 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tataaaatcatataccaata 72 |||||||||||||||||||| Sbjct: 1506398 tataaaatcatataccaata 1506417
>dbj|AP008979.1| Xanthomonas oryzae phage OP1 DNA, complete genome Length = 43785 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 agattttttctttagctgaa 139 |||||||||||||||||||| Sbjct: 25638 agattttttctttagctgaa 25619
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tttttctttagctgaaacaa 143 |||||||||||||||||||| Sbjct: 1315615 tttttctttagctgaaacaa 1315596
>gb|DQ369984.1| HIV-1 isolate 03ZAPS046MB1 from South Africa, complete genome Length = 9101 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 aaagattttttctttagctgaaacaaca 145 ||||||| |||||||| ||||||||||| Sbjct: 3390 aaagattatttctttaactgaaacaaca 3417
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 cgggcgtaaagattttttctttag 134 |||| ||||||||||||||||||| Sbjct: 4604884 cgggagtaaagattttttctttag 4604907
>dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0681H07 Length = 144722 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 cgggcgtaaagattttttctttag 134 |||| ||||||||||||||||||| Sbjct: 57753 cgggagtaaagattttttctttag 57776
>dbj|AB018117.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQL5 Length = 88398 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tataaaatcatataccaata 72 |||||||||||||||||||| Sbjct: 2916 tataaaatcatataccaata 2935
>gb|AC005873.3|AC005873 citb_15_o_21, complete sequence Length = 195653 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 catataccaatagttattat 80 |||||||||||||||||||| Sbjct: 132207 catataccaatagttattat 132188
>emb|AL929340.4| Zebrafish DNA sequence from clone CH211-248N16 in linkage group 20, complete sequence Length = 163231 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tgatataaaatcatatacca 69 |||||||||||||||||||| Sbjct: 115172 tgatataaaatcatatacca 115153
>emb|Z72777.1|SCYGL255W S.cerevisiae chromosome VII reading frame ORF YGL255w Length = 5996 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcaaaaaaggaattatgagc 111 |||||||||||||||||||| Sbjct: 4657 tcaaaaaaggaattatgagc 4676 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,904,058 Number of Sequences: 3902068 Number of extensions: 2904058 Number of successful extensions: 193346 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 193120 Number of HSP's gapped (non-prelim): 226 length of query: 209 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 187 effective length of database: 17,147,199,772 effective search space: 3206526357364 effective search space used: 3206526357364 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)