Clone Name	rbastl38b06
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome ...	50	0.007
2	gb|AC129606.4| Mus musculus BAC clone RP23-128L6 from 8, complet...	50	0.007
3	emb|AJ315897.2|MMU315897 Mus musculus partial DCBCK gene for den...	50	0.007
4	gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosom...	46	0.10
5	gb|AC167405.5| Mus musculus chromosome 18, clone wi1-977A17, com...	42	1.6
6	gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, c...	42	1.6
7	gb|AC147883.2| Xenopus tropicalis clone CH216-117C13, complete s...	42	1.6
8	gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosom...	42	1.6
9	gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, comple...	42	1.6
10	emb|AL662812.12| Mouse DNA sequence from clone RP23-48A2 on chro...	42	1.6
11	gb|AC167012.3| Mus musculus BAC clone RP23-416A5 from chromosome...	40	6.3
12	gb|AC151805.20| Medicago truncatula clone mth2-59n17, complete s...	40	6.3
13	gb|AC170084.13| Medicago truncatula clone mth2-156k10, complete ...	40	6.3
14	ref|XM_455887.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F17996g ...	40	6.3
15	gb|AC005518.2| Homo sapiens PAC clone RP4-777G9 from 7, complete...	40	6.3
16	gb|AC123032.5| Mus musculus BAC clone RP24-480K24 from chromosom...	40	6.3
17	gb|AC121602.2| Mus musculus BAC clone RP23-309B19 from 10, compl...	40	6.3
18	gb|CP000001.1| Bacillus cereus E33L, complete genome	40	6.3
19	emb|AL589745.8| Human DNA sequence from clone RP11-478K15 on chr...	40	6.3
20	emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso...	40	6.3
21	gb|AC162038.6| Mus musculus 6 BAC RP24-576J4 (Roswell Park Cance...	40	6.3
22	emb|CR354603.12| Zebrafish DNA sequence from clone CH211-106J11 ...	40	6.3
23	gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete seq...	40	6.3
24	gb|AC107992.3| Homo sapiens chromosome 15, clone RP11-150L8, com...	40	6.3
25	gb|AC093566.3| Homo sapiens chromosome 8, clone CTD-2017M22, com...	40	6.3
26	gb|AC022740.4|AC022740 Homo sapiens chromosome 15, clone RP11-61...	40	6.3
27	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.3
28	gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, r...	40	6.3
29	dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic D...	40	6.3
30	gb|AC131101.3| Mus musculus BAC clone RP23-60O18 from 6, complet...	40	6.3
31	emb|BX248136.12| Zebrafish DNA sequence from clone DKEY-81B15 in...	40	6.3
32	dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D...	40	6.3
33	emb|CT485672.1| Leptosphaeria maculans : genomic region surround...	40	6.3
34	gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77...	40	6.3
35	gb|AC159261.4| Mus musculus BAC clone RP24-80C13 from chromosome...	40	6.3
36	gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s...	40	6.3
37	emb|AL645963.9| Mouse DNA sequence from clone RP23-76C16 on chro...	40	6.3
38	emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chro...	40	6.3
39	emb|AL671925.4| Mouse DNA sequence from clone RP23-236O21 on chr...	40	6.3
40	emb|AL663028.12| Mouse DNA sequence from clone RP23-23J11 on chr...	40	6.3

---

>gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome 8, complete sequence
          Length = 188704

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 314    aactcatggagagtcatctgcctct 338
              |||||||||||||||||||||||||
Sbjct: 135200 aactcatggagagtcatctgcctct 135176

---

>gb|AC129606.4| Mus musculus BAC clone RP23-128L6 from 8, complete sequence
          Length = 235915

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 314 aactcatggagagtcatctgcctct 338
           |||||||||||||||||||||||||
Sbjct: 656 aactcatggagagtcatctgcctct 632

---

>emb|AJ315897.2|MMU315897 Mus musculus partial DCBCK gene for dendritic cell and B cell derived
            chemokine, promoter region and exon 1-3
          Length = 11728

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 314  aactcatggagagtcatctgcctct 338
            |||||||||||||||||||||||||
Sbjct: 6428 aactcatggagagtcatctgcctct 6404

---

>gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosome 12, complete sequence
          Length = 208710

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 312    caaactcatggagagtcatctgcctct 338
              |||||||||||||| ||||||||||||
Sbjct: 166180 caaactcatggagattcatctgcctct 166206

---

>gb|AC167405.5| Mus musculus chromosome 18, clone wi1-977A17, complete sequence
          Length = 41204

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 202  cacaccgcctgtgcacagacc 222
            |||||||||||||||||||||
Sbjct: 1705 cacaccgcctgtgcacagacc 1725

---

>gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, complete sequence
          Length = 195506

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 202    cacaccgcctgtgcacagacc 222
              |||||||||||||||||||||
Sbjct: 189645 cacaccgcctgtgcacagacc 189665

---

>gb|AC147883.2| Xenopus tropicalis clone CH216-117C13, complete sequence
          Length = 165987

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 129   tacatgtacagttttataattacag 153
             ||||||||| |||||||||||||||
Sbjct: 43206 tacatgtactgttttataattacag 43230

---

>gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosome 17, complete
             sequence
          Length = 187926

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    acagaaatactacaaacattt 50
             |||||||||||||||||||||
Sbjct: 46043 acagaaatactacaaacattt 46063

---

>gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, complete sequence
          Length = 194372

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     acagaaatactacaaacattt 50
              |||||||||||||||||||||
Sbjct: 190292 acagaaatactacaaacattt 190312

---

>emb|AL662812.12| Mouse DNA sequence from clone RP23-48A2 on chromosome 11 Contains the
              gene for a novel protein similar to smoothelin Smtn, three
              novel genes, the Mybbp1a gene for MYB binding protein
              (P160) 1a, a ribosomal protein 7a (Rpl7a) pseudogene, the
              5' end of the Ube2g1 gene for ubiquitin-conjugating enzyme
              E2G 1 (UBC7 homolog, C. elegans) and four CpG islands,
              complete sequence
          Length = 258521

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 314    aactcatggagagtcatctgcctct 338
              |||||||||||| ||||||||||||
Sbjct: 160730 aactcatggagattcatctgcctct 160754

---

>gb|AC167012.3| Mus musculus BAC clone RP23-416A5 from chromosome 13, complete sequence
          Length = 193916

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    ggagctttctaaaatacaacagcg 105
             |||||||||||||||||| |||||
Sbjct: 85374 ggagctttctaaaatacatcagcg 85351

---

>gb|AC151805.20| Medicago truncatula clone mth2-59n17, complete sequence
          Length = 143937

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    gaaatactacaaacatttcc 52
             ||||||||||||||||||||
Sbjct: 40330 gaaatactacaaacatttcc 40349

---

>gb|AC170084.13| Medicago truncatula clone mth2-156k10, complete sequence
          Length = 143943

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     gaaatactacaaacatttcc 52
              ||||||||||||||||||||
Sbjct: 103611 gaaatactacaaacatttcc 103592

---

>ref|XM_455887.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F17996g predicted mRNA
          Length = 2055

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 306 tttgaacaaactcatggaga 325
           ||||||||||||||||||||
Sbjct: 616 tttgaacaaactcatggaga 635

---

>gb|AC005518.2| Homo sapiens PAC clone RP4-777G9 from 7, complete sequence
          Length = 89097

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   aacaaaaatggagcttgcag 419
             ||||||||||||||||||||
Sbjct: 41651 aacaaaaatggagcttgcag 41670

---

>gb|AC123032.5| Mus musculus BAC clone RP24-480K24 from chromosome 10, complete
           sequence
          Length = 162676

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 tctctggaaaccagcaatag 291
           ||||||||||||||||||||
Sbjct: 923 tctctggaaaccagcaatag 904

---

>gb|AC121602.2| Mus musculus BAC clone RP23-309B19 from 10, complete sequence
          Length = 182661

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   tctctggaaaccagcaatag 291
             ||||||||||||||||||||
Sbjct: 55530 tctctggaaaccagcaatag 55549

---

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 27      acgacagaaatactacaaac 46
               ||||||||||||||||||||
Sbjct: 4896509 acgacagaaatactacaaac 4896528

---

>emb|AL589745.8| Human DNA sequence from clone RP11-478K15 on chromosome 13 Contains
             parts of four novel genes, the 5' end of a novel gene and
             a CpG island, complete sequence
          Length = 170765

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   ttccagggaaggtacacata 446
             ||||||||||||||||||||
Sbjct: 21026 ttccagggaaggtacacata 21045

---

>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 306     tttgaacaaactcatggaga 325
               ||||||||||||||||||||
Sbjct: 1646207 tttgaacaaactcatggaga 1646226

---

>gb|AC162038.6| Mus musculus 6 BAC RP24-576J4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 175787

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 300   attgcctttgaacaaactcatgga 323
             ||||||||||||| ||||||||||
Sbjct: 40154 attgcctttgaaccaactcatgga 40131

---

>emb|CR354603.12| Zebrafish DNA sequence from clone CH211-106J11 in linkage group 24,
             complete sequence
          Length = 159582

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     tgcaagtcactggcattggt 25
             ||||||||||||||||||||
Sbjct: 39857 tgcaagtcactggcattggt 39876

---

>gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete sequence
          Length = 129518

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   gaaatactacaaacatttcc 52
            ||||||||||||||||||||
Sbjct: 2093 gaaatactacaaacatttcc 2074

---

>gb|AC107992.3| Homo sapiens chromosome 15, clone RP11-150L8, complete sequence
          Length = 149015

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   ttttaagctcattggagatt 129
             ||||||||||||||||||||
Sbjct: 61370 ttttaagctcattggagatt 61389

---

>gb|AC093566.3| Homo sapiens chromosome 8, clone CTD-2017M22, complete sequence
          Length = 177522

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    tagtattaggagctttctaa 93
             ||||||||||||||||||||
Sbjct: 73742 tagtattaggagctttctaa 73761

---

>gb|AC022740.4|AC022740 Homo sapiens chromosome 15, clone RP11-617D22, complete sequence
          Length = 162482

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   ttttaagctcattggagatt 129
             ||||||||||||||||||||
Sbjct: 99619 ttttaagctcattggagatt 99638

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 117      ctcattggagattacatgta 136
                ||||||||||||||||||||
Sbjct: 26250351 ctcattggagattacatgta 26250332

---

>gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, region 38E-38F, BAC clone
             BACR07D17, complete sequence
          Length = 173422

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 127   attacatgtacagttttataatta 150
             |||||||||| |||||||||||||
Sbjct: 39427 attacatgtatagttttataatta 39450

---

>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0455H11
          Length = 101607

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   ctcattggagattacatgta 136
             ||||||||||||||||||||
Sbjct: 24979 ctcattggagattacatgta 24960

---

>gb|AC131101.3| Mus musculus BAC clone RP23-60O18 from 6, complete sequence
          Length = 182176

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 300    attgcctttgaacaaactcatgga 323
              ||||||||||||| ||||||||||
Sbjct: 147778 attgcctttgaaccaactcatgga 147755

---

>emb|BX248136.12| Zebrafish DNA sequence from clone DKEY-81B15 in linkage group 20,
             complete sequence
          Length = 222316

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   tgtacagttttataattaca 152
             ||||||||||||||||||||
Sbjct: 74167 tgtacagttttataattaca 74148

---

>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0519E12
          Length = 152448

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    ctcattggagattacatgta 136
              ||||||||||||||||||||
Sbjct: 142209 ctcattggagattacatgta 142190

---

>emb|CT485672.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene
             AvrLm1 (AM084345)
          Length = 31195

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    aaggattagtattaggagct 87
             ||||||||||||||||||||
Sbjct: 13529 aaggattagtattaggagct 13548

---

>gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77 of 83 of the complete
             sequence
          Length = 270158

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 127   attacatgtacagttttataatta 150
             |||||||||| |||||||||||||
Sbjct: 29241 attacatgtatagttttataatta 29264

---

>gb|AC159261.4| Mus musculus BAC clone RP24-80C13 from chromosome 13, complete sequence
          Length = 230437

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    ggagctttctaaaatacaacagcg 105
             |||||||||||||||||| |||||
Sbjct: 57080 ggagctttctaaaatacatcagcg 57057

---

>gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s DS04217 (D56) and DS00582
             (D85)), complete sequence
          Length = 142799

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 127   attacatgtacagttttataatta 150
             |||||||||| |||||||||||||
Sbjct: 50108 attacatgtatagttttataatta 50085

---

>emb|AL645963.9| Mouse DNA sequence from clone RP23-76C16 on chromosome 11, complete
            sequence
          Length = 176154

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 343  agatttagtcggaggcccctgctg 366
            |||||||||| |||||||||||||
Sbjct: 3009 agatttagtcagaggcccctgctg 3032

---

>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete
            sequence
          Length = 193057

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 267  agcattctctggaaaccagc 286
            ||||||||||||||||||||
Sbjct: 1783 agcattctctggaaaccagc 1802

---

>emb|AL671925.4| Mouse DNA sequence from clone RP23-236O21 on chromosome 4, complete
             sequence
          Length = 218429

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    aggagctttctaaaatacaa 100
             ||||||||||||||||||||
Sbjct: 39369 aggagctttctaaaatacaa 39388

---

>emb|AL663028.12| Mouse DNA sequence from clone RP23-23J11 on chromosome 2, complete
              sequence
          Length = 110275

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    agcattctctggaaaccagc 286
              ||||||||||||||||||||
Sbjct: 110058 agcattctctggaaaccagc 110077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,329,422
Number of Sequences: 3902068
Number of extensions: 4329422
Number of successful extensions: 80371
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80243
Number of HSP's gapped (non-prelim): 128
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---