ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MRP14_ARATH (Q9LYS2) Multidrug resistance-associated protein 14 ... 49 5e-06
2MRP15_ARATH (Q7FB56) Putative multidrug resistance-associated pr... 41 0.001
3MRP5_ARATH (Q7GB25) Multidrug resistance-associated protein 5 (E... 41 0.001
4MRP9_ARATH (Q9M1C7) Multidrug resistance-associated protein 9 (E... 41 0.001
5MRP6_ARATH (Q8LGU1) Multidrug resistance-associated protein 6 pr... 36 0.033
6MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (E... 32 0.81
7MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (E... 31 1.1
8MRP4_ARATH (Q7DM58) Multidrug resistance-associated protein 4 (E... 30 2.4
9YAWB_SCHPO (Q10185) Probable ATP-dependent permease C3F10.11c 30 3.1
10YCFI_YEAST (P39109) Metal resistance protein YCF1 (Yeast cadmium... 29 5.3
11UIP3_YEAST (P39547) ULP1-interacting protein 3 (DUP240 protein U... 28 6.9
12PROA_PSEHT (Q3IEY7) Gamma-glutamyl phosphate reductase (GPR) (EC... 28 9.0
13ABCCB_HUMAN (Q96J66) ATP-binding cassette transporter sub-family... 28 9.0
14YH85_SCHPO (Q9P5N0) Probable ATP-dependent permease C359.05 28 9.0
15GLGB_CHLCV (Q823Y5) 1,4-alpha-glucan branching enzyme (EC 2.4.1.... 28 9.0

>MRP14_ARATH (Q9LYS2) Multidrug resistance-associated protein 14 (EC 3.6.3.44)|
            (Glutathione S-conjugate transporting ATPase 14)
            (ATP-energized glutathione S-conjugate pump 14)
          Length = 1389

 Score = 48.9 bits (115), Expect = 5e-06
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -3

Query: 425  SDGKVAEYDKPAKLMETEGSLFRELVNEYWSY 330
            SDG++ EYD+P KLM+ E SLF +LV EYWS+
Sbjct: 1351 SDGRIVEYDEPMKLMKDENSLFGKLVKEYWSH 1382



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>MRP15_ARATH (Q7FB56) Putative multidrug resistance-associated protein 15 (EC|
            3.6.3.44) (Glutathione S-conjugate transporting ATPase
            15) (ATP-energized glutathione S-conjugate pump 15)
          Length = 1037

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = -3

Query: 425  SDGKVAEYDKPAKLMETEGSLFRELVNEY 339
            SDG++AE+D PAKL++ E S F +L+ EY
Sbjct: 994  SDGRIAEFDSPAKLLQREDSFFSKLIKEY 1022



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>MRP5_ARATH (Q7GB25) Multidrug resistance-associated protein 5 (EC 3.6.3.44)|
            (Glutathione S-conjugate transporting ATPase 5)
            (ATP-energized glutathione S-conjugate pump 5)
          Length = 1514

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = -3

Query: 425  SDGKVAEYDKPAKLMETEGSLFRELVNEYWS 333
            SDG+VAE+D PA+L+E + S+F +LV EY S
Sbjct: 1476 SDGRVAEFDTPARLLEDKSSMFLKLVTEYSS 1506



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>MRP9_ARATH (Q9M1C7) Multidrug resistance-associated protein 9 (EC 3.6.3.44)|
            (Glutathione S-conjugate transporting ATPase 9)
            (ATP-energized glutathione S-conjugate pump 9)
          Length = 1490

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = -3

Query: 425  SDGKVAEYDKPAKLMETEGSLFRELVNEY 339
            SDG++AE+D PAKL++ E S F +L+ EY
Sbjct: 1447 SDGRIAEFDSPAKLLQREDSFFSKLIKEY 1475



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>MRP6_ARATH (Q8LGU1) Multidrug resistance-associated protein 6 precursor (EC|
            3.6.3.44) (Glutathione S-conjugate transporting ATPase 6)
            (ATP-energized glutathione S-conjugate pump 6)
          Length = 1295

 Score = 36.2 bits (82), Expect = 0.033
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = -3

Query: 425  SDGKVAEYDKPAKLMETEGSLFRELVNEYWS 333
            S G + EY++P+KLMET+ S F +LV EYW+
Sbjct: 1254 SFGDLVEYNEPSKLMETD-SYFSKLVAEYWA 1283



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>MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (EC 3.6.3.44)|
            (Glutathione S-conjugate transporting ATPase 8)
            (ATP-energized glutathione S-conjugate pump 8)
          Length = 1466

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 419  GKVAEYDKPAKLMETEGSLFRELVNEY 339
            G + E+D PA+L+E   SLF + V EY
Sbjct: 1429 GLIKEHDSPARLLEDRSSLFSKFVAEY 1455



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>MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (EC 3.6.3.44)|
            (Glutathione S-conjugate transporting ATPase 7)
            (ATP-energized glutathione S-conjugate pump 7)
          Length = 1493

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 419  GKVAEYDKPAKLMETEGSLFRELVNEY 339
            G + E+D PA+L+E + S F +LV EY
Sbjct: 1451 GLIEEHDSPARLLEDKSSSFSKLVAEY 1477



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>MRP4_ARATH (Q7DM58) Multidrug resistance-associated protein 4 (EC 3.6.3.44)|
            (Glutathione S-conjugate transporting ATPase 4)
            (ATP-energized glutathione S-conjugate pump 4)
          Length = 1516

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -3

Query: 419  GKVAEYDKPAKLMETEGSLFRELVNEY 339
            GK  E+D PA+L+E   SLF  LV EY
Sbjct: 1484 GKAKEFDSPARLLE-RPSLFAALVQEY 1509



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>YAWB_SCHPO (Q10185) Probable ATP-dependent permease C3F10.11c|
          Length = 1478

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 419  GKVAEYDKPAKLMETEGSLFRELVNE 342
            GKV E+D   KL+E + SLF  L  E
Sbjct: 1449 GKVVEFDSTKKLLENKASLFYSLAKE 1474



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>YCFI_YEAST (P39109) Metal resistance protein YCF1 (Yeast cadmium factor 1)|
          Length = 1515

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 422  DGKVAEYDKPAKLMETEGSLFRELVNE 342
            +GKVAE+D P +L+    SLF  L  E
Sbjct: 1482 NGKVAEFDSPGQLLSDNKSLFYSLCME 1508



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>UIP3_YEAST (P39547) ULP1-interacting protein 3 (DUP240 protein UIP3)|
          Length = 235

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = -3

Query: 425 SDGKVAEYDKP-AKLMETEGSLFRELVNEYWSYTSNGKI*KRFLM------VCLVLL 276
           +D K+   D+P A L+E   +L  +  N YWSY  N     + LM      VCLVLL
Sbjct: 8   TDVKLDTLDEPSAHLIEENVALPEDTFNSYWSYILNEIARCKPLMIMFLIPVCLVLL 64



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>PROA_PSEHT (Q3IEY7) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)|
           (Glutamate-5-semialdehyde dehydrogenase)
           (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
           dehydrogenase)
          Length = 415

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 287 LVLLPQQEKTLDIVIA*HTSEGFIHLRSEENTVPSFSRFSG 165
           L+ L QQ  ++D++I     EG I+  +E +T+P    F G
Sbjct: 186 LMELMQQRDSIDLIIP-RGGEGLINFVTENSTIPVIQHFKG 225



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>ABCCB_HUMAN (Q96J66) ATP-binding cassette transporter sub-family C member 11|
            (Multidrug resistance-associated protein 8)
          Length = 1382

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -3

Query: 422  DGKVAEYDKPAKLMETEGSLFRELV 348
            +GKV E+D+P  L +  GSLF  L+
Sbjct: 1350 NGKVVEFDRPEVLRKKPGSLFAALM 1374



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>YH85_SCHPO (Q9P5N0) Probable ATP-dependent permease C359.05|
          Length = 1465

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 419  GKVAEYDKPAKLMETEGSLFRELVNE 342
            GKV E+D   KL+E + S+F  L  E
Sbjct: 1436 GKVVEFDATKKLLENKDSMFYSLAKE 1461



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>GLGB_CHLCV (Q823Y5) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 719

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
 Frame = -3

Query: 236 HTSEGF--IHLRSEENTVPSFSRFSGND--FALYSYLKLRATYG*PMFVEYCHS*KTPRL 69
           H  E F  +  +  +N V S+ RFSG D   AL       + Y  P +V +C   KT  L
Sbjct: 614 HKQESFLWVDFKDTKNNVISYYRFSGEDRSSALLCIHHFSSEYF-PSYVLHCQGIKTCEL 672

Query: 68  NGTEKHTYLGGASAGS 21
                    GG+  G+
Sbjct: 673 LFNSDDISFGGSGKGN 688


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,684,382
Number of Sequences: 219361
Number of extensions: 1057284
Number of successful extensions: 2209
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2209
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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