>SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7)|
            (Alanine--tRNA ligase) (AlaRS)
          Length = 1003

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = -3

Query: 424  VLDWLTPSIAPXXXXXXXXXXXXXXXXGSDASRVKEAMELATQIASMKLS 275
            V +WLT ++ P                G+DAS+V+ A+++A+  ASMKL+
Sbjct: 954  VTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMASSFASMKLN 1003

>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (CaVT.3)
          Length = 2201

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = -2

Query: 257 SSYILSGCLMVVLTLLSQIVMREHKIIHENQLEAVSIFTLQDVV*SSQLSCNYSLVYQME 78
           S ++++ CL+V+ T  S+   REH+++ E +   +S  T+      ++    Y  ++Q  
Sbjct: 384 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASY---AEPGDCYEEIFQYV 440

Query: 77  CYI*R 63
           C+I R
Sbjct: 441 CHILR 445

>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein|
           18) (Small proline-rich-like epidermal differentiation
           complex protein 5A)
          Length = 118

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
 Frame = -2

Query: 428 QGVGLAYTFNRTTQGKRRRRQEWSCPGP-------GK*CFSGQGGNGACY 300
           +G G   + +R  Q  RRR Q  SC G        G  C    GG+G C+
Sbjct: 63  EGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCH 112

>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (Ca(v)3.3)
          Length = 2223

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = -2

Query: 257 SSYILSGCLMVVLTLLSQIVMREHKIIHENQLEAVSIFTLQDVV*SSQLSCNYSLVYQME 78
           S ++++ CL+V+ T  S+   REH+++ E +   +S  T+      ++    Y  ++Q  
Sbjct: 386 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASY---AEPGDCYEEIFQYV 442

Query: 77  CYI*R 63
           C+I R
Sbjct: 443 CHILR 447

>K0286_MOUSE (Q6ZQE4) Protein KIAA0286|
          Length = 437

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = -2

Query: 362 WSCPGPGK*CFSGQGGNGACYPDSFDEAELIC*DWSSYILSGCLMVVLTLLSQIVMREHK 183
           WS  GPG  C+   GG GA               W   +++GC++     ++ ++++E +
Sbjct: 10  WSAVGPGPRCWGAGGGGGA--------------TWLLLVVAGCVVCGSADVNVVMLQESQ 55

Query: 182 I 180
           +
Sbjct: 56  V 56

>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)|
          Length = 2570

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +2

Query: 233  SSHLICMKTSLN-KSAQLHRSYLGSKLHCLLDPRSITSLALGK 358
            S H  C+ T LN +  + H  Y+G  L CL +        LG+
Sbjct: 2145 SEHANCLSTGLNTRRCECHAGYVGDGLQCLEESEPPVDRCLGQ 2187


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,870,179
Number of Sequences: 219361
Number of extensions: 1157061
Number of successful extensions: 2373
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2372
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)