ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465847.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
2ref|XM_506808.1| PREDICTED Oryza sativa (japonica cultivar-group... 62 2e-06
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
4dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
5dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
6dbj|AK100315.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
7dbj|AK100111.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
9dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
10gb|AY244805.1| Homo sapiens hemogen (HEMGN) mRNA, complete cds 44 0.44
11gb|AY255672.1| Homo sapiens negative differentiation regulator (... 44 0.44
12ref|NM_018437.3| Homo sapiens hemogen (HEMGN), transcript varian... 44 0.44
13ref|NM_197978.1| Homo sapiens hemogen (HEMGN), transcript varian... 44 0.44
14gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC... 44 0.44
15emb|AL445198.13| Human DNA sequence from clone RP11-288F8 on chr... 44 0.44
16emb|AL499604.9| Human DNA sequence from clone RP11-23B15 on chro... 44 0.44
17gb|AF306682.1| Homo sapiens clone L15-1a mRNA sequence 44 0.44
18gb|AF306681.1| Homo sapiens clone 305-6G mRNA sequence 44 0.44
19dbj|AK128778.1| Homo sapiens cDNA FLJ45424 fis, clone BRHIP3037274 44 0.44
20gb|AC092784.2| Homo sapiens chromosome 1 clone RP5-833A20, compl... 44 0.44
21gb|AF228713.2|AF228713 Homo sapiens EDAG-1 mRNA, complete cds 44 0.44
22gb|AF116617.1|AF116617 Homo sapiens PRO1037 mRNA, complete cds 44 0.44
23gb|AF130060.1|AF130060 Homo sapiens clone FLB6229 PRO1620 mRNA, ... 44 0.44
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
26gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) ch... 44 0.44
27dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
28dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
29gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.44
30emb|AL833094.1|HSM804405 Homo sapiens mRNA; cDNA DKFZp313B2015 (... 44 0.44
31gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, comp... 42 1.7
32gb|BT018542.1| Zea mays clone EL01N0437B10.d mRNA sequence 42 1.7
33gb|BT017804.1| Zea mays clone EL01N0506D06.c mRNA sequence 42 1.7
34gb|AY165659.1| Sweltsa sp. SLB-2003 cytochrome c oxidase subunit... 42 1.7
35gb|U40801.1| Caenorhabditis elegans cosmid F28E10, complete sequ... 42 1.7
36gb|AC010336.8| Homo sapiens chromosome 19 clone CTD-3193O13, com... 42 1.7
37gb|AC008812.7|AC008812 Homo sapiens chromosome 19 clone CTD-2102... 42 1.7
38gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, com... 40 6.9
39gb|AC114677.13| Mus musculus chromosome 18, clone RP24-213K19, c... 40 6.9
40gb|AC102999.7| Rattus norvegicus 7 BAC CH230-33J22 (Children's H... 40 6.9
41gb|BC074346.1| Xenopus laevis MGC84185 protein, mRNA (cDNA clone... 40 6.9
42gb|AC124372.4| Mus musculus BAC clone RP24-556P17 from chromosom... 40 6.9
43gb|AC163451.2| Mus musculus chromosome 18, clone RP24-173G16, co... 40 6.9
44emb|AL773519.5| Mouse DNA sequence from clone RP23-42C15 on chro... 40 6.9
45dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 6.9
46gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, co... 40 6.9
47gb|AC003103.2| Homo sapiens chromosome 17, clone CTC-268N12, com... 40 6.9
48gb|AC154359.2| Mus musculus BAC clone RP23-178L8 from chromosome... 40 6.9
49dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
50gb|AC010145.10| Homo sapiens BAC clone RP11-355H10 from 2, compl... 40 6.9
51gb|AC083900.6| Homo sapiens BAC clone RP11-372C13 from 2, comple... 40 6.9
52dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 6.9
53dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
54dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
55dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
56emb|BX255886.7| Zebrafish DNA sequence from clone CH211-268G14, ... 40 6.9
57emb|BX530412.8| Zebrafish DNA sequence from clone DKEY-42F6 in l... 40 6.9
58emb|AL513502.3|HS123J20 Homo sapiens chromosome 9 BAC RP11-123j2... 40 6.9
59emb|CR749743.13| Zebrafish DNA sequence from clone DKEY-97M3 in ... 40 6.9
60gb|AY111628.1| Zea mays CL34754_1 mRNA sequence 40 6.9
61emb|BX296546.6| Zebrafish DNA sequence from clone CH211-234P1 in... 40 6.9
62emb|BX294438.8| Mouse DNA sequence from clone RP23-208P4 on chro... 40 6.9
63gb|AC119902.12| Mus musculus chromosome 8, clone RP24-235G23, co... 40 6.9
64gb|AE015927.1| Clostridium tetani E88, complete genome 40 6.9
65gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
66emb|AL772419.4|CNS08C9X Oryza sativa chromosome 12, . BAC OJ1115... 40 6.9
67emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.9
68gb|AC145910.2| Gallus gallus BAC clone CH261-44O1 from chromosom... 40 6.9
69emb|AL450004.4|HS520K3 Homo sapiens chromosome 9 BAC RP11-520K3,... 40 6.9 
>ref|XM_465847.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2973

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/56 (89%), Gaps = 4/56 (7%)
 Strand = Plus / Minus

                                                                    
Query: 98   aataatttagtcagaacaaaatgctgctaactatgcctcaccacctctaatcacaa 153
            |||||||||||||||||||||||||    ||| |||| ||||||||||||||||||
Sbjct: 2833 aataatttagtcagaacaaaatgct----actctgccacaccacctctaatcacaa 2782
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>ref|XM_506808.1| PREDICTED Oryza sativa (japonica cultivar-group), P0654A08.34 mRNA
          Length = 3027

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/56 (89%), Gaps = 4/56 (7%)
 Strand = Plus / Minus

                                                                    
Query: 98   aataatttagtcagaacaaaatgctgctaactatgcctcaccacctctaatcacaa 153
            |||||||||||||||||||||||||    ||| |||| ||||||||||||||||||
Sbjct: 2887 aataatttagtcagaacaaaatgct----actctgccacaccacctctaatcacaa 2836
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/56 (89%), Gaps = 4/56 (7%)
 Strand = Plus / Minus

                                                                        
Query: 98       aataatttagtcagaacaaaatgctgctaactatgcctcaccacctctaatcacaa 153
                |||||||||||||||||||||||||    ||| |||| ||||||||||||||||||
Sbjct: 17885155 aataatttagtcagaacaaaatgct----actctgccacaccacctctaatcacaa 17885104



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 142      ctctaatcacaattcacaaatc 163
                ||||||||||||||||||||||
Sbjct: 33067206 ctctaatcacaattcacaaatc 33067227
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>dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1126_B06
          Length = 99637

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/56 (89%), Gaps = 4/56 (7%)
 Strand = Plus / Minus

                                                                     
Query: 98    aataatttagtcagaacaaaatgctgctaactatgcctcaccacctctaatcacaa 153
             |||||||||||||||||||||||||    ||| |||| ||||||||||||||||||
Sbjct: 19788 aataatttagtcagaacaaaatgct----actctgccacaccacctctaatcacaa 19737
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>dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0654A08
          Length = 154812

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/56 (89%), Gaps = 4/56 (7%)
 Strand = Plus / Minus

                                                                      
Query: 98     aataatttagtcagaacaaaatgctgctaactatgcctcaccacctctaatcacaa 153
              |||||||||||||||||||||||||    ||| |||| ||||||||||||||||||
Sbjct: 124686 aataatttagtcagaacaaaatgct----actctgccacaccacctctaatcacaa 124635
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>dbj|AK100315.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078O21, full
            insert sequence
          Length = 3029

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/56 (89%), Gaps = 4/56 (7%)
 Strand = Plus / Minus

                                                                    
Query: 98   aataatttagtcagaacaaaatgctgctaactatgcctcaccacctctaatcacaa 153
            |||||||||||||||||||||||||    ||| |||| ||||||||||||||||||
Sbjct: 2887 aataatttagtcagaacaaaatgct----actctgccacaccacctctaatcacaa 2836
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>dbj|AK100111.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005P11, full
            insert sequence
          Length = 2975

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 50/56 (89%), Gaps = 4/56 (7%)
 Strand = Plus / Minus

                                                                    
Query: 98   aataatttagtcagaacaaaatgctgctaactatgcctcaccacctctaatcacaa 153
            |||||||||||||||||||||||||    ||| |||| ||||||||||||||||||
Sbjct: 2833 aataatttagtcagaacaaaatgct----actctgccacaccacctctaatcacaa 2782
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 142      ctctaatcacaattcacaaatccattc 168
                |||||||||||||||||||||| ||||
Sbjct: 18790383 ctctaatcacaattcacaaatcgattc 18790357
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>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0055I24
          Length = 155872

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 142    ctctaatcacaattcacaaatccattc 168
              |||||||||||||||||||||| ||||
Sbjct: 122671 ctctaatcacaattcacaaatcgattc 122645
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>gb|AY244805.1| Homo sapiens hemogen (HEMGN) mRNA, complete cds
          Length = 2262

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 38   aattgaacagcatttacaagaa 59
            ||||||||||||||||||||||
Sbjct: 2053 aattgaacagcatttacaagaa 2032
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>gb|AY255672.1| Homo sapiens negative differentiation regulator (NDR) mRNA, complete
            cds
          Length = 2178

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 38   aattgaacagcatttacaagaa 59
            ||||||||||||||||||||||
Sbjct: 1960 aattgaacagcatttacaagaa 1939
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>ref|NM_018437.3| Homo sapiens hemogen (HEMGN), transcript variant 1, mRNA
          Length = 2210

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 38   aattgaacagcatttacaagaa 59
            ||||||||||||||||||||||
Sbjct: 1992 aattgaacagcatttacaagaa 1971
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>ref|NM_197978.1| Homo sapiens hemogen (HEMGN), transcript variant 2, mRNA
          Length = 2178

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 38   aattgaacagcatttacaagaa 59
            ||||||||||||||||||||||
Sbjct: 1960 aattgaacagcatttacaagaa 1939
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>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete
              sequence
          Length = 140064

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 93     aaaagaataatttagtcagaacaaaa 118
              ||||||||||||||||||||| ||||
Sbjct: 111615 aaaagaataatttagtcagaaaaaaa 111640
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>emb|AL445198.13| Human DNA sequence from clone RP11-288F8 on chromosome 1 Contains part
             of the NFIA gene for nuclear factor I/A, complete sequence
          Length = 78404

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 177   tttcaaaaagaaaagtgagcaaaaat 202
             |||||||||||| |||||||||||||
Sbjct: 33449 tttcaaaaagaagagtgagcaaaaat 33474
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>emb|AL499604.9| Human DNA sequence from clone RP11-23B15 on chromosome 9 Contains FOXE1
              gene for forkhead box E1 (thyroid transcription factor 2),
              HEMGN gene for hemogen, 2 novel genes and 5 CpG islands,
              complete sequence
          Length = 160796

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 38     aattgaacagcatttacaagaa 59
              ||||||||||||||||||||||
Sbjct: 145271 aattgaacagcatttacaagaa 145292
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>gb|AF306682.1| Homo sapiens clone L15-1a mRNA sequence
          Length = 2103

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 38   aattgaacagcatttacaagaa 59
            ||||||||||||||||||||||
Sbjct: 1891 aattgaacagcatttacaagaa 1870
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>gb|AF306681.1| Homo sapiens clone 305-6G mRNA sequence
          Length = 1095

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 38  aattgaacagcatttacaagaa 59
           ||||||||||||||||||||||
Sbjct: 925 aattgaacagcatttacaagaa 904
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>dbj|AK128778.1| Homo sapiens cDNA FLJ45424 fis, clone BRHIP3037274
          Length = 3834

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 177  tttcaaaaagaaaagtgagcaaaaat 202
            |||||||||||| |||||||||||||
Sbjct: 2938 tttcaaaaagaagagtgagcaaaaat 2963
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>gb|AC092784.2| Homo sapiens chromosome 1 clone RP5-833A20, complete sequence
          Length = 117613

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 177   tttcaaaaagaaaagtgagcaaaaat 202
             |||||||||||| |||||||||||||
Sbjct: 26136 tttcaaaaagaagagtgagcaaaaat 26111
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>gb|AF228713.2|AF228713 Homo sapiens EDAG-1 mRNA, complete cds
          Length = 2166

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 38   aattgaacagcatttacaagaa 59
            ||||||||||||||||||||||
Sbjct: 1960 aattgaacagcatttacaagaa 1939
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>gb|AF116617.1|AF116617 Homo sapiens PRO1037 mRNA, complete cds
          Length = 1747

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 38   aattgaacagcatttacaagaa 59
            ||||||||||||||||||||||
Sbjct: 1509 aattgaacagcatttacaagaa 1488
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>gb|AF130060.1|AF130060 Homo sapiens clone FLB6229 PRO1620 mRNA, complete cds
          Length = 2048

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 38  aattgaacagcatttacaagaa 59
           ||||||||||||||||||||||
Sbjct: 209 aattgaacagcatttacaagaa 230
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 142      ctctaatcacaattcacaaatc 163
                ||||||||||||||||||||||
Sbjct: 15538826 ctctaatcacaattcacaaatc 15538847
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 142      ctctaatcacaattcacaaatc 163
                ||||||||||||||||||||||
Sbjct: 27158657 ctctaatcacaattcacaaatc 27158678



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 147      atcacaattcacaaatccat 166
                ||||||||||||||||||||
Sbjct: 20237806 atcacaattcacaaatccat 20237825



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 147     atcacaattcacaaatccat 166
               ||||||||||||||||||||
Sbjct: 5899607 atcacaattcacaaatccat 5899588
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>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20,
             complete sequence
          Length = 193119

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 142   ctctaatcacaattcacaaatc 163
             ||||||||||||||||||||||
Sbjct: 26192 ctctaatcacaattcacaaatc 26213
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>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1293_A01
          Length = 139121

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 142    ctctaatcacaattcacaaatc 163
              ||||||||||||||||||||||
Sbjct: 113146 ctctaatcacaattcacaaatc 113167
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>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003E08
          Length = 135014

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 142   ctctaatcacaattcacaaatc 163
             ||||||||||||||||||||||
Sbjct: 66335 ctctaatcacaattcacaaatc 66356
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 142      ctctaatcacaattcacaaatc 163
                ||||||||||||||||||||||
Sbjct: 15547067 ctctaatcacaattcacaaatc 15547088
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>emb|AL833094.1|HSM804405 Homo sapiens mRNA; cDNA DKFZp313B2015 (from clone DKFZp313B2015)
          Length = 2114

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 38   aattgaacagcatttacaagaa 59
            ||||||||||||||||||||||
Sbjct: 1893 aattgaacagcatttacaagaa 1872
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>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence
          Length = 218929

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 182   aaaagaaaagtgagcaaaaat 202
             |||||||||||||||||||||
Sbjct: 66458 aaaagaaaagtgagcaaaaat 66438
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>gb|BT018542.1| Zea mays clone EL01N0437B10.d mRNA sequence
          Length = 1822

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 332  acatcctgttgcagatatcctcaaggatc 360
            ||||| |||||| ||||||||||||||||
Sbjct: 1734 acatcatgttgctgatatcctcaaggatc 1706
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>gb|BT017804.1| Zea mays clone EL01N0506D06.c mRNA sequence
          Length = 1139

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 332  acatcctgttgcagatatcctcaaggatc 360
            ||||| |||||| ||||||||||||||||
Sbjct: 1055 acatcatgttgctgatatcctcaaggatc 1027
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>gb|AY165659.1| Sweltsa sp. SLB-2003 cytochrome c oxidase subunit I (COI) gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 624

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 257 aacattcaaggtactaatcaa 277
           |||||||||||||||||||||
Sbjct: 194 aacattcaaggtactaatcaa 174
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>gb|U40801.1| Caenorhabditis elegans cosmid F28E10, complete sequence
          Length = 38614

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   aaaaagaaaagtgagcaaaaa 201
             |||||||||||||||||||||
Sbjct: 32189 aaaaagaaaagtgagcaaaaa 32169
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>gb|AC010336.8| Homo sapiens chromosome 19 clone CTD-3193O13, complete sequence
          Length = 160770

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 384   atacagtcagaaatccaagtt 404
             |||||||||||||||||||||
Sbjct: 17713 atacagtcagaaatccaagtt 17733
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>gb|AC008812.7|AC008812 Homo sapiens chromosome 19 clone CTD-2102F19, complete sequence
          Length = 143619

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 384    atacagtcagaaatccaagtt 404
              |||||||||||||||||||||
Sbjct: 139612 atacagtcagaaatccaagtt 139632
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>gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, complete sequence
          Length = 221435

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    caggacaggaaattgaacag 47
             ||||||||||||||||||||
Sbjct: 35597 caggacaggaaattgaacag 35616
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>gb|AC114677.13| Mus musculus chromosome 18, clone RP24-213K19, complete sequence
          Length = 182311

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  caccaaaagaataatttagt 108
           ||||||||||||||||||||
Sbjct: 698 caccaaaagaataatttagt 679
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>gb|AC102999.7| Rattus norvegicus 7 BAC CH230-33J22 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 209654

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    aactatgcctcaccacctct 145
              ||||||||||||||||||||
Sbjct: 192346 aactatgcctcaccacctct 192327
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>gb|BC074346.1| Xenopus laevis MGC84185 protein, mRNA (cDNA clone MGC:84185
           IMAGE:6953287), complete cds
          Length = 2790

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  acaggaaattgaacagcatt 51
           ||||||||||||||||||||
Sbjct: 312 acaggaaattgaacagcatt 331
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>gb|AC124372.4| Mus musculus BAC clone RP24-556P17 from chromosome 16, complete
             sequence
          Length = 197211

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   caccacctctaatcacaatt 155
             ||||||||||||||||||||
Sbjct: 95599 caccacctctaatcacaatt 95618
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>gb|AC163451.2| Mus musculus chromosome 18, clone RP24-173G16, complete sequence
          Length = 146338

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    caccaaaagaataatttagt 108
             ||||||||||||||||||||
Sbjct: 61177 caccaaaagaataatttagt 61158
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>emb|AL773519.5| Mouse DNA sequence from clone RP23-42C15 on chromosome 4 Contains
              mitochondrial NADH dehydrogenase 5 and 6 (mt-Nd5, mt-Nd6)
              pseudogenes and a mitochondrial cytochrome b (Cytb)
              pseudogene, complete sequence
          Length = 204189

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     ggacaggaaattgaacagca 49
              ||||||||||||||||||||
Sbjct: 113956 ggacaggaaattgaacagca 113937
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 15      cacccagcaattgcaggaca 34
               ||||||||||||||||||||
Sbjct: 1811785 cacccagcaattgcaggaca 1811766
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>gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, complete sequence
          Length = 135692

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  tcagaaatccaagttgagat 409
            ||||||||||||||||||||
Sbjct: 9717 tcagaaatccaagttgagat 9698
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>gb|AC003103.2| Homo sapiens chromosome 17, clone CTC-268N12, complete sequence
          Length = 101800

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   tcagaaatccaagttgagat 409
             ||||||||||||||||||||
Sbjct: 12730 tcagaaatccaagttgagat 12749
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>gb|AC154359.2| Mus musculus BAC clone RP23-178L8 from chromosome 16, complete sequence
          Length = 212696

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    caccacctctaatcacaatt 155
              ||||||||||||||||||||
Sbjct: 119941 caccacctctaatcacaatt 119922
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 147      atcacaattcacaaatccat 166
                ||||||||||||||||||||
Sbjct: 10638633 atcacaattcacaaatccat 10638614
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>gb|AC010145.10| Homo sapiens BAC clone RP11-355H10 from 2, complete sequence
          Length = 198960

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   aaaaagaaaagtgagcaaaa 200
             ||||||||||||||||||||
Sbjct: 47573 aaaaagaaaagtgagcaaaa 47592
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>gb|AC083900.6| Homo sapiens BAC clone RP11-372C13 from 2, complete sequence
          Length = 155161

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    aaaaagaaaagtgagcaaaa 200
              ||||||||||||||||||||
Sbjct: 119575 aaaaagaaaagtgagcaaaa 119556
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>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 39      attgaacagcatttacaagaactt 62
               ||||||||||||||| ||||||||
Sbjct: 1814123 attgaacagcatttagaagaactt 1814100
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>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0051H17
          Length = 187471

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    atcacaattcacaaatccat 166
              ||||||||||||||||||||
Sbjct: 144184 atcacaattcacaaatccat 144203
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>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OSJNBa0026J14
          Length = 163496

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 147  atcacaattcacaaatccat 166
            ||||||||||||||||||||
Sbjct: 3839 atcacaattcacaaatccat 3858
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>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0016I09
          Length = 148517

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    atcacaattcacaaatccat 166
              ||||||||||||||||||||
Sbjct: 103348 atcacaattcacaaatccat 103329
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>emb|BX255886.7| Zebrafish DNA sequence from clone CH211-268G14, complete sequence
          Length = 62994

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 177   tttcaaaaagaaaagtgagcaaaa 200
             ||||||||| ||||||||||||||
Sbjct: 55698 tttcaaaaacaaaagtgagcaaaa 55675
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>emb|BX530412.8| Zebrafish DNA sequence from clone DKEY-42F6 in linkage group 4, complete
              sequence
          Length = 218203

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 32     acaggaaattgaacagcatttacaagaa 59
              ||||||||||||| | ||||||||||||
Sbjct: 144073 acaggaaattgaagaacatttacaagaa 144046
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>emb|AL513502.3|HS123J20 Homo sapiens chromosome 9 BAC RP11-123j20, complete sequence
          Length = 174636

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    catttacaagaacttaggtg 67
             ||||||||||||||||||||
Sbjct: 67813 catttacaagaacttaggtg 67832
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>emb|CR749743.13| Zebrafish DNA sequence from clone DKEY-97M3 in linkage group 4,
             complete sequence
          Length = 177044

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   tgcaatttcaaaaagaaaag 191
             ||||||||||||||||||||
Sbjct: 89822 tgcaatttcaaaaagaaaag 89841
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>gb|AY111628.1| Zea mays CL34754_1 mRNA sequence
          Length = 1138

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 332 acatcctgttgcagatatcctcaaggatctcc 363
           ||||| |||||| |||||| ||||||||||||
Sbjct: 272 acatcatgttgctgatatcatcaaggatctcc 303
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>emb|BX296546.6| Zebrafish DNA sequence from clone CH211-234P1 in linkage group 4,
            complete sequence
          Length = 174235

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 32   acaggaaattgaacagcatttacaagaa 59
            ||||||||||||| | ||||||||||||
Sbjct: 8629 acaggaaattgaagaacatttacaagaa 8602
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>emb|BX294438.8| Mouse DNA sequence from clone RP23-208P4 on chromosome X, complete
            sequence
          Length = 20640

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   caggacaggaaattgaacag 47
            ||||||||||||||||||||
Sbjct: 7756 caggacaggaaattgaacag 7775
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>gb|AC119902.12| Mus musculus chromosome 8, clone RP24-235G23, complete sequence
          Length = 146712

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     caggacaggaaattgaacag 47
              ||||||||||||||||||||
Sbjct: 129134 caggacaggaaattgaacag 129153
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>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 108     tcagaacaaaatgctgctaa 127
               ||||||||||||||||||||
Sbjct: 1331799 tcagaacaaaatgctgctaa 1331818
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 147      atcacaattcacaaatccat 166
                ||||||||||||||||||||
Sbjct: 10638515 atcacaattcacaaatccat 10638496
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>emb|AL772419.4|CNS08C9X Oryza sativa chromosome 12, . BAC OJ1115_G02 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 112916

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    atcacaattcacaaatccat 166
              ||||||||||||||||||||
Sbjct: 101936 atcacaattcacaaatccat 101917
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>emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb0085N21 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 135105

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 147  atcacaattcacaaatccat 166
            ||||||||||||||||||||
Sbjct: 3529 atcacaattcacaaatccat 3510
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>gb|AC145910.2| Gallus gallus BAC clone CH261-44O1 from chromosome unknown, complete
             sequence
          Length = 213878

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   gagggtaatacagtcagaaa 396
             ||||||||||||||||||||
Sbjct: 59014 gagggtaatacagtcagaaa 58995
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>emb|AL450004.4|HS520K3 Homo sapiens chromosome 9 BAC RP11-520K3, complete sequence
          Length = 174662

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     catttacaagaacttaggtg 67
              ||||||||||||||||||||
Sbjct: 150006 catttacaagaacttaggtg 150025


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,539,391
Number of Sequences: 3902068
Number of extensions: 5539391
Number of successful extensions: 102730
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102199
Number of HSP's gapped (non-prelim): 524
length of query: 506
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 484
effective length of database: 17,147,199,772
effective search space: 8299244689648
effective search space used: 8299244689648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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