ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl38a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KIN31_CAEEL (P34265) Probable tyrosine-protein kinase kin-31 (EC... 29 2.6
2CHTA_VIBCH (P01555) Cholera enterotoxin subunit A precursor (Cho... 28 5.7

>KIN31_CAEEL (P34265) Probable tyrosine-protein kinase kin-31 (EC 2.7.10.2)|
          Length = 437

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 331 CCAMAPGKRPVMRDAAALLDRIS 263
           CCA  P  RP M D A +L R++
Sbjct: 358 CCAENPNDRPTMSDVAQILQRVT 380



to top

>CHTA_VIBCH (P01555) Cholera enterotoxin subunit A precursor (Cholera|
           enterotoxin, A chain) [Contains: Cholera enterotoxin
           subunit A1 (EC 2.4.2.36) (NAD(+)--diphthamide
           ADP-ribosyltransferase) (Cholera enterotoxin A1 chain)
           (Cholera enterotoxin alpha chai
          Length = 258

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 324 PWRQASGPSCGTPPRSSTGSRC 259
           PW   + P CG  PRSS  + C
Sbjct: 196 PWIHHAPPGCGNAPRSSMSNTC 217


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,630,061
Number of Sequences: 219361
Number of extensions: 605650
Number of successful extensions: 1255
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top