Clone Name | rbastl38a03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SSB_WIGBR (Q8D254) Single-stranded DNA-binding protein (SSB) (He... | 29 | 6.2 | 2 | LIPP_PIG (P00591) Pancreatic triacylglycerol lipase (EC 3.1.1.3)... | 28 | 8.1 |
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>SSB_WIGBR (Q8D254) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 163 Score = 28.9 bits (63), Expect = 6.2 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +3 Query: 12 QDQAIHTISSP*TVTERSITTYQV-RDKNGEEEKENTTWLFYRDERHRFIVF 164 QD + I + +T S+ T + RDKN E KE T W HR I+F Sbjct: 17 QDPEVRYIPNGNAITNLSLATSENWRDKNTGESKEKTEW-------HRVILF 61
>LIPP_PIG (P00591) Pancreatic triacylglycerol lipase (EC 3.1.1.3) (Pancreatic| lipase) (PL) Length = 450 Score = 28.5 bits (62), Expect = 8.1 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +1 Query: 61 DPLQPTRSEIRMGRKRRRILHGF 129 DP T S RM RK R I+HGF Sbjct: 56 DPSTITNSNFRMDRKTRFIIHGF 78 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,362,223 Number of Sequences: 219361 Number of extensions: 768778 Number of successful extensions: 2097 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2046 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2097 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)