>ref|NM_195184.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala
            synthetase (OSJNBb0022I16.6), mRNA
          Length = 2085

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                         
Query: 347  cagcttcattgaagctatctgtgtagcaagctccatggcctcctt 391
            ||||||||||||||||||||| ||||||| |||||| || |||||
Sbjct: 2079 cagcttcattgaagctatctgggtagcaacctccatagcttcctt 2035

>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0022I16, complete sequence
          Length = 127068

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 347   cagcttcattgaagctatctgtgtagcaagctccatggcctcctt 391
             ||||||||||||||||||||| ||||||| |||||| || |||||
Sbjct: 56729 cagcttcattgaagctatctgggtagcaacctccatagcttcctt 56685

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                            
Query: 347     cagcttcattgaagctatctgtgtagcaagctccatggcctcctt 391
               ||||||||||||||||||||| ||||||| |||||| || |||||
Sbjct: 5293531 cagcttcattgaagctatctgggtagcaacctccatagcttcctt 5293487

>dbj|AK066368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M16, full
            insert sequence
          Length = 3214

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                         
Query: 347  cagcttcattgaagctatctgtgtagcaagctccatggcctcctt 391
            ||||||||||||||||||||| ||||||| |||||| || |||||
Sbjct: 3002 cagcttcattgaagctatctgggtagcaacctccatagcttcctt 2958

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                            
Query: 347     cagcttcattgaagctatctgtgtagcaagctccatggcctcctt 391
               ||||||||||||||||||||| ||||||| |||||| || |||||
Sbjct: 5294318 cagcttcattgaagctatctgggtagcaacctccatagcttcctt 5294274

>gb|AC157560.3| Mus musculus chromosome 15, clone RP24-270I3, complete sequence
          Length = 157844

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 212   ttacctctaggttgctgcctt 232
             |||||||||||||||||||||
Sbjct: 80430 ttacctctaggttgctgcctt 80410

>emb|AL392045.9| Human DNA sequence from clone RP13-408A12 on chromosome 10, complete
             sequence
          Length = 161933

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 38    aaagcagatacaaaatggcca 58
             |||||||||||||||||||||
Sbjct: 55695 aaagcagatacaaaatggcca 55715

>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 372    gcaagctccatggcctccttg 392
              |||||||||||||||||||||
Sbjct: 442005 gcaagctccatggcctccttg 441985

>emb|AL162633.3|CNS01RHY Human chromosome 14 DNA sequence BAC R-210O8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 164550

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 329   agtctcaacaaatcagctcagcttc 353
             ||||||| |||||||||||||||||
Sbjct: 60085 agtctcatcaaatcagctcagcttc 60061

>emb|AL355073.5|CNS05TC7 Human chromosome 14 DNA sequence BAC R-930O11 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175988

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 329    agtctcaacaaatcagctcagcttc 353
              ||||||| |||||||||||||||||
Sbjct: 154766 agtctcatcaaatcagctcagcttc 154790

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 372   gcaagctccatggcctccttg 392
             |||||||||||||||||||||
Sbjct: 90648 gcaagctccatggcctccttg 90628

>gb|AC122560.8| Mus musculus chromosome 15, clone RP24-93E14, complete sequence
          Length = 174003

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    tctcaacaaatcagctcagc 350
              ||||||||||||||||||||
Sbjct: 108976 tctcaacaaatcagctcagc 108995

>gb|AY795578.1| Sterculia stipulata NADH dehydrogenase (ndhF) gene, partial cds;
          chloroplast
          Length = 2117

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 20 tattaaaatatgaatgggaa 39
          ||||||||||||||||||||
Sbjct: 55 tattaaaatatgaatgggaa 36

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 16      tttttattaaaatatgaatg 35
               ||||||||||||||||||||
Sbjct: 3545607 tttttattaaaatatgaatg 3545588

>gb|AC121924.3| Mus musculus BAC clone RP24-198P16 from chromosome 2, complete sequence
          Length = 177062

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 11     ccatctttttattaaaatatgaat 34
              ||||||||| ||||||||||||||
Sbjct: 121691 ccatcttttaattaaaatatgaat 121714

>gb|AY113678.1| Scyllarus arctus 28S ribosomal RNA gene, partial sequence
          Length = 851

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 taggttgctgccttcgctgc 238
           ||||||||||||||||||||
Sbjct: 333 taggttgctgccttcgctgc 352

>emb|BX530056.17| Zebrafish DNA sequence from clone CH211-208I16 in linkage group 18,
              complete sequence
          Length = 235804

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     tttttattaaaatatgaatg 35
              ||||||||||||||||||||
Sbjct: 184432 tttttattaaaatatgaatg 184413

>emb|AL590678.3| Human DNA sequence from clone RP11-141E7 on chromosome 6, complete
             sequence
          Length = 149849

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    catctttttattaaaatatg 31
             ||||||||||||||||||||
Sbjct: 86021 catctttttattaaaatatg 86040

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 377     ctccatggcctccttgaccc 396
               ||||||||||||||||||||
Sbjct: 2062888 ctccatggcctccttgaccc 2062907

>emb|AL390962.11| Human DNA sequence from clone RP11-84G24 on chromosome 9 Contains the
             5' end of a novel gene, complete sequence
          Length = 169670

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     cataacccatctttttattaaaat 28
             |||||| |||||||||||||||||
Sbjct: 41936 cataacacatctttttattaaaat 41959

>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    gctccatggcctccttgacc 395
              ||||||||||||||||||||
Sbjct: 236046 gctccatggcctccttgacc 236065

>gb|AC147816.2| Xenopus tropicalis clone CH216-106C24, complete sequence
          Length = 152642

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 298   tctaaaagcacacttatcaagaga 321
             ||||||||||||||||| ||||||
Sbjct: 41122 tctaaaagcacacttattaagaga 41145

>emb|BX470263.9| Zebrafish DNA sequence from clone DKEY-15P9 in linkage group 9,
             complete sequence
          Length = 176022

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ctttttattaaaatatgaat 34
             ||||||||||||||||||||
Sbjct: 32673 ctttttattaaaatatgaat 32692

>emb|BX276111.12| Zebrafish DNA sequence from clone CH211-258H7 in linkage group 13,
              complete sequence
          Length = 195980

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     catctttttattaaaatatgaatg 35
              |||||||||||||||| |||||||
Sbjct: 169188 catctttttattaaaaaatgaatg 169211

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     ctgccttcgctgccagggat 245
               ||||||||||||||||||||
Sbjct: 2666508 ctgccttcgctgccagggat 2666489

>gb|AC087397.10| Homo sapiens chromosome 18, clone RP11-594P16, complete sequence
          Length = 185912

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 32     aatgggaaagcagatacaaaatgg 55
              |||||||||||| |||||||||||
Sbjct: 146355 aatgggaaagcatatacaaaatgg 146378

>gb|AC018972.6| Homo sapiens chromosome 18, clone RP11-756M1, complete sequence
          Length = 160602

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    aatgggaaagcagatacaaaatgg 55
             |||||||||||| |||||||||||
Sbjct: 21121 aatgggaaagcatatacaaaatgg 21144

>emb|BX649538.4| Zebrafish DNA sequence from clone CH211-239N21 in linkage group 3,
             complete sequence
          Length = 147441

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcacttgtataagtgcagca 87
             ||||||||||||||||||||
Sbjct: 38883 tcacttgtataagtgcagca 38864

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 16      tttttattaaaatatgaatg 35
               ||||||||||||||||||||
Sbjct: 3545718 tttttattaaaatatgaatg 3545699

>emb|BX649631.8| Zebrafish DNA sequence from clone CH211-186M12 in linkage group 22,
             complete sequence
          Length = 168355

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    ccatctttttattaaaatat 30
             ||||||||||||||||||||
Sbjct: 14712 ccatctttttattaaaatat 14731

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 376     gctccatggcctccttgacc 395
               ||||||||||||||||||||
Sbjct: 7595821 gctccatggcctccttgacc 7595802

>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0026H19, complete sequence
          Length = 150620

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tttttattaaaatatgaatg 35
             ||||||||||||||||||||
Sbjct: 63260 tttttattaaaatatgaatg 63241

>gb|AY261361.1| African swine fever virus isolate Malawi Lil-20/1 (1983), complete genome
          Length = 187612

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 17     ttttattaaaatatgaatgggaaa 40
              ||||||||||||||||||| ||||
Sbjct: 115714 ttttattaaaatatgaatgagaaa 115737

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 220     aggttgctgccttcgctgcc 239
               ||||||||||||||||||||
Sbjct: 3990338 aggttgctgccttcgctgcc 3990319

>emb|AL929249.15| Mouse DNA sequence from clone RP23-273G23 on chromosome 2, complete
              sequence
          Length = 194209

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     ccatctttttattaaaatatgaat 34
              ||||||||| ||||||||||||||
Sbjct: 106967 ccatcttttaattaaaatatgaat 106944

>emb|AL845275.20| Mouse DNA sequence from clone RP23-112F5 on chromosome 2, complete
             sequence
          Length = 227422

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 7     taacccatctttttattaaaatat 30
             |||| |||||||||||||||||||
Sbjct: 50407 taacacatctttttattaaaatat 50430

>emb|AL954771.5| Zebrafish DNA sequence from clone CH211-220B15 in linkage group 21,
              complete sequence
          Length = 197721

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     tttttattaaaatatgaatg 35
              ||||||||||||||||||||
Sbjct: 103013 tttttattaaaatatgaatg 102994

>gb|DQ079810.1| Scyllarus arctus voucher KC2159 28S large subunit ribosomal RNA gene,
            partial sequence
          Length = 2163

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  taggttgctgccttcgctgc 238
            ||||||||||||||||||||
Sbjct: 1136 taggttgctgccttcgctgc 1155


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,544,869
Number of Sequences: 3902068
Number of extensions: 3544869
Number of successful extensions: 74082
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73830
Number of HSP's gapped (non-prelim): 252
length of query: 401
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 379
effective length of database: 17,147,199,772
effective search space: 6498788713588
effective search space used: 6498788713588
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)