Clone Name | rbastl33h08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NEUM_BUFJA (P08162) Mesotocin-neurophysin MT precursor [Contains... | 31 | 1.7 | 2 | CN12L_CAEEL (Q95QU0) CSN12-like protein | 28 | 8.6 |
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>NEUM_BUFJA (P08162) Mesotocin-neurophysin MT precursor [Contains: Mesotocin| (MT); Neurophysin MT] Length = 125 Score = 30.8 bits (68), Expect = 1.7 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 Query: 166 TPCFSSRKPPINTGPHTHLSKLCCAHDS 249 +PC S RKP N G + S +CC H+S Sbjct: 84 SPCESGRKPCGNNGGNCARSGICCNHES 111
>CN12L_CAEEL (Q95QU0) CSN12-like protein| Length = 413 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -2 Query: 168 RTSLFLDSQDLVKPSLFYAFRNCSIPSFQN 79 R ++F +L + SL YAFRNC S N Sbjct: 230 RKAMFDADLNLAEKSLLYAFRNCPADSMSN 259 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,442,823 Number of Sequences: 219361 Number of extensions: 951019 Number of successful extensions: 1914 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1896 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1914 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)