>gb|AY110220.1| Zea mays CL3641_1 mRNA sequence
          Length = 880

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 80/96 (83%)
 Strand = Plus / Plus

                                                                       
Query: 294 gaggtgacggtctatgatctcagacacggtctccaggaacaggttctcactcgtccccgg 353
           |||||||||||| ||||| ||||| || || || | ||||| ||| ||||| | ||| ||
Sbjct: 212 gaggtgacggtccatgatttcagatacagtttctaagaacatgttttcactggaccctgg 271

                                               
Query: 354 gagaacggcgtcctccgcttcctggatgatgtcctc 389
           |||||| || ||||| |||||||| |||||||||||
Sbjct: 272 gagaacagcatcctctgcttcctgaatgatgtcctc 307



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 49/56 (87%), Gaps = 6/56 (10%)
 Strand = Plus / Plus

                                                                   
Query: 215 atacttacagcaaaccggatacag-----ac-gaacaactagatcagttattctga 264
           ||||||||| ||||||||||||||     || ||||||||||||||||||||||||
Sbjct: 134 atacttacaacaaaccggatacagctggaactgaacaactagatcagttattctga 189

>dbj|AK061872.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A05, full
            insert sequence
          Length = 1080

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 231  ggatacagacgaacaactagatcagttattctg 263
            ||||||||  |||||||||||||||||||||||
Sbjct: 1011 ggatacagctgaacaactagatcagttattctg 979



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 294 gaggtgacggtctatgatctcagacacggt 323
           |||||||||||||||||| ||||| |||||
Sbjct: 955 gaggtgacggtctatgatttcagatacggt 926

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 231      ggatacagacgaacaactagatcagttattctg 263
                ||||||||  |||||||||||||||||||||||
Sbjct: 13444985 ggatacagctgaacaactagatcagttattctg 13445017



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 294      gaggtgacggtctatgatctcagacacggt 323
                |||||||||||||||||| ||||| |||||
Sbjct: 13445041 gaggtgacggtctatgatttcagatacggt 13445070

>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1294_G12
          Length = 121979

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 231    ggatacagacgaacaactagatcagttattctg 263
              ||||||||  |||||||||||||||||||||||
Sbjct: 106417 ggatacagctgaacaactagatcagttattctg 106449



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 294    gaggtgacggtctatgatctcagacacggt 323
              |||||||||||||||||| ||||| |||||
Sbjct: 106473 gaggtgacggtctatgatttcagatacggt 106502

>dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0428A03
          Length = 136799

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 231   ggatacagacgaacaactagatcagttattctg 263
             ||||||||  |||||||||||||||||||||||
Sbjct: 56409 ggatacagctgaacaactagatcagttattctg 56441



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 294   gaggtgacggtctatgatctcagacacggt 323
             |||||||||||||||||| ||||| |||||
Sbjct: 56465 gaggtgacggtctatgatttcagatacggt 56494

>dbj|AK100224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047L02, full
            insert sequence
          Length = 2490

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 231  ggatacagacgaacaactagatcagttattctg 263
            ||||||||  |||||||||||||||||||||||
Sbjct: 2291 ggatacagctgaacaactagatcagttattctg 2259



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 294  gaggtgacggtctatgatctcagacacggt 323
            |||||||||||||||||| ||||| |||||
Sbjct: 2235 gaggtgacggtctatgatttcagatacggt 2206

>dbj|AK065176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D10, full
            insert sequence
          Length = 2389

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 231  ggatacagacgaacaactagatcagttattctg 263
            ||||||||  |||||||||||||||||||||||
Sbjct: 2269 ggatacagctgaacaactagatcagttattctg 2237



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 294  gaggtgacggtctatgatctcagacacggt 323
            |||||||||||||||||| ||||| |||||
Sbjct: 2213 gaggtgacggtctatgatttcagatacggt 2184

>gb|BT024182.1| Zea mays clone EL01N0414H08 mRNA sequence
          Length = 1514

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 154  aaacaaatgaaatcattagtcccttga 180
            |||||||||||||| ||||||||||||
Sbjct: 1409 aaacaaatgaaatcgttagtcccttga 1383



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 78/97 (80%)
 Strand = Plus / Minus

                                                                        
Query: 293  ggaggtgacggtctatgatctcagacacggtctccaggaacaggttctcactcgtccccg 352
            ||||||||||||| ||||| ||||| |  || || | ||||| ||| ||||| | ||  |
Sbjct: 1293 ggaggtgacggtccatgatttcagataaagtttctaagaacatgttttcactggaccatg 1234

                                                 
Query: 353  ggagaacggcgtcctccgcttcctggatgatgtcctc 389
            ||||||| || ||||| |||||||| |||||| ||||
Sbjct: 1233 ggagaacagcatcctctgcttcctgaatgatgacctc 1197

>emb|BX323459.20| Zebrafish DNA sequence from clone DKEYP-27C11 in linkage group 6,
             complete sequence
          Length = 168538

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 153   gaaacaaatgaaatcattagtccctt 178
             |||||||||| |||||||||||||||
Sbjct: 69408 gaaacaaatgtaatcattagtccctt 69383

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 285     cttgccgaggaggtgacggtctatg 309
               |||||||||| ||||||||||||||
Sbjct: 3707130 cttgccgagggggtgacggtctatg 3707106

>emb|AL136382.6| Human DNA sequence from clone RP5-977L11 on chromosome 1p22.3-31.2
             Contains the 3' end of a novel gene (KIAA1229), complete
             sequence
          Length = 136387

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 268   tttctaaacagatattacttg 288
             |||||||||||||||||||||
Sbjct: 96476 tttctaaacagatattacttg 96496

>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37
          Length = 199667

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 151    tagaaacaaatgaaatcatta 171
              |||||||||||||||||||||
Sbjct: 109726 tagaaacaaatgaaatcatta 109706

>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project)
          Length = 118718

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 151   tagaaacaaatgaaatcatta 171
             |||||||||||||||||||||
Sbjct: 88634 tagaaacaaatgaaatcatta 88614

>gb|AC105306.13| Bos taurus clone rp42-158g13, complete sequence
          Length = 196377

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 249   agatcagttattctgagtgtt 269
             |||||||||||||||||||||
Sbjct: 14179 agatcagttattctgagtgtt 14199

>gb|AC068614.5| Homo sapiens BAC clone RP11-512N1 from 2, complete sequence
          Length = 164706

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 248   tagatcagttattctgagtgtttct 272
             ||||||| |||||||||||||||||
Sbjct: 54885 tagatcaattattctgagtgtttct 54909

>gb|AC068584.11| Homo sapiens chromosome 17, clone RP11-450A4, complete sequence
          Length = 65598

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   gagctggtctggggcagtgcc 205
             |||||||||||||||||||||
Sbjct: 13363 gagctggtctggggcagtgcc 13343

>gb|AC068014.16| Homo sapiens chromosome 17, clone RP11-567O16, complete sequence
          Length = 148509

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 185  gagctggtctggggcagtgcc 205
            |||||||||||||||||||||
Sbjct: 8101 gagctggtctggggcagtgcc 8121

>gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, complete sequence
          Length = 166568

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 159   aatgaaatcattagtcccttgatg 182
             ||||||| ||||||||||||||||
Sbjct: 72309 aatgaaagcattagtcccttgatg 72332

>emb|AL713984.7| Human DNA sequence from clone RP11-25C24 on chromosome 10, complete
              sequence
          Length = 161584

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     tattcacagaagaaaatgtt 114
              ||||||||||||||||||||
Sbjct: 150573 tattcacagaagaaaatgtt 150554

>emb|AL121873.15|HSB362E11 Human DNA sequence from clone RP13-362E11 on chromosome X Contains an
              ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1)
              pseudogene, complete sequence
          Length = 212280

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     ctccaatcaaaacgaacaat 41
              ||||||||||||||||||||
Sbjct: 154863 ctccaatcaaaacgaacaat 154844

>emb|BX942831.16| Zebrafish DNA sequence from clone CH211-62B4 in linkage group 5,
             complete sequence
          Length = 147881

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   caaatgaaatcattagtccc 176
             ||||||||||||||||||||
Sbjct: 83404 caaatgaaatcattagtccc 83385

>gb|AC093804.3| Homo sapiens BAC clone RP11-326C15 from 4, complete sequence
          Length = 177708

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    ttcacagaagaaaatgttcttgag 120
             ||||||||| ||||||||||||||
Sbjct: 11651 ttcacagaataaaatgttcttgag 11628

>gb|AF022141.2|AF022141 Homo sapiens chromosome 21 clone cosmid Q13F10 map 21q22.2, complete
             sequence
          Length = 43473

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   ggggctagaaacaaatgaaa 165
             ||||||||||||||||||||
Sbjct: 39847 ggggctagaaacaaatgaaa 39866

>gb|AF020801.2|AF020801 Homo sapiens chromosome 21 clone cosmid c102A0977 map 21q22.2, complete
             sequence
          Length = 44548

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   ggggctagaaacaaatgaaa 165
             ||||||||||||||||||||
Sbjct: 12869 ggggctagaaacaaatgaaa 12888

>emb|CR352825.1| Gallus gallus finished cDNA, clone ChEST121k3
          Length = 1209

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 agaaacaaatgaaatcatta 171
           ||||||||||||||||||||
Sbjct: 876 agaaacaaatgaaatcatta 857

>dbj|AP001724.1| Homo sapiens genomic DNA, chromosome 21q, section 68/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   ggggctagaaacaaatgaaa 165
             ||||||||||||||||||||
Sbjct: 97686 ggggctagaaacaaatgaaa 97705

>gb|AC010094.5|AC010094 Homo sapiens BAC clone RP11-336O5 from Y, complete sequence
          Length = 118436

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    ctccaatcaaaacgaacaat 41
             ||||||||||||||||||||
Sbjct: 31983 ctccaatcaaaacgaacaat 31964

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 376     tggatgatgtcctcgatcac 395
               ||||||||||||||||||||
Sbjct: 8525526 tggatgatgtcctcgatcac 8525545

>dbj|BS000199.1| Pan troglodytes chromosome 22 clone:PTB-024F05, map 22, complete
             sequences
          Length = 141767

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   ggggctagaaacaaatgaaa 165
             ||||||||||||||||||||
Sbjct: 27233 ggggctagaaacaaatgaaa 27252

>dbj|AP000413.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K7L4
          Length = 65047

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   tatattcacagaagaaaatg 112
            ||||||||||||||||||||
Sbjct: 9813 tatattcacagaagaaaatg 9832

>emb|AJ229041.1|HS229041 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22;
             segment 1/3
          Length = 323000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   ggggctagaaacaaatgaaa 165
             ||||||||||||||||||||
Sbjct: 85341 ggggctagaaacaaatgaaa 85322

>gb|AC002509.1|AC002509 Homo sapiens chromosome Y, clone 2Y, complete sequence
          Length = 142099

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    ctccaatcaaaacgaacaat 41
             ||||||||||||||||||||
Sbjct: 73562 ctccaatcaaaacgaacaat 73543

>gb|AC002488.1|AC002488 Homo sapiens chromosome X, clone 36X, complete sequence
          Length = 104710

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    ctccaatcaaaacgaacaat 41
             ||||||||||||||||||||
Sbjct: 82116 ctccaatcaaaacgaacaat 82135

>emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chromosome 16, complete
              sequence
          Length = 243114

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 159    aatgaaatcattagtcccttgatg 182
              ||||||| ||||||||||||||||
Sbjct: 234549 aatgaaagcattagtcccttgatg 234526


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,483,790
Number of Sequences: 3902068
Number of extensions: 3483790
Number of successful extensions: 72328
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72200
Number of HSP's gapped (non-prelim): 128
length of query: 395
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 373
effective length of database: 17,147,199,772
effective search space: 6395905514956
effective search space used: 6395905514956
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)