Clone Name | rbastl33h04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CJ082_HUMAN (Q8WW14) Protein C10orf82 | 28 | 4.3 | 2 | BGLR_MOUSE (P12265) Beta-glucuronidase precursor (EC 3.2.1.31) | 27 | 9.5 |
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>CJ082_HUMAN (Q8WW14) Protein C10orf82| Length = 154 Score = 28.5 bits (62), Expect = 4.3 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +3 Query: 144 SRSIALQALHVFNLKAQPMVLTC 212 S LQALH +NL+ P++L C Sbjct: 71 SEETVLQALHQYNLQYHPLILEC 93
>BGLR_MOUSE (P12265) Beta-glucuronidase precursor (EC 3.2.1.31)| Length = 648 Score = 27.3 bits (59), Expect = 9.5 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +2 Query: 65 LPGLHKSPPNIFSSKY 112 +PG+H+ PP +FS +Y Sbjct: 542 IPGIHEDPPRMFSEEY 557 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,130,859 Number of Sequences: 219361 Number of extensions: 861593 Number of successful extensions: 1434 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1410 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1434 length of database: 80,573,946 effective HSP length: 92 effective length of database: 60,392,734 effective search space used: 1449425616 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)