>SYNE2_HUMAN (Q8WXH0) Nesprin-2 (Nuclear envelope spectrin repeat protein 2)|
            (Syne-2) (Synaptic nuclear envelope protein 2) (Nucleus
            and actin connecting element protein) (NUANCE protein)
          Length = 6885

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +2

Query: 146  GKLHLKARGELNDSYNSNQMQQVLIQDSLKTK*YLYCSRATNTTSSGASP 295
            G +  +A G+++ S NS  M Q+L  DSL T+    CS   N T  G +P
Sbjct: 4160 GTIVQEAYGKISTSDNS--MAQILTPDSLNTEQGPECSLRPNQTEEGTTP 4207

>ACVS_CEPAC (P25464) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase|
            (EC 6.3.2.26)
            (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine
            synthetase) (ACV synthetase) (ACVS)
          Length = 3712

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 23/83 (27%), Positives = 36/83 (43%)
 Frame = +2

Query: 104  NLMNGPSNYVAHTIGKLHLKARGELNDSYNSNQMQQVLIQDSLKTK*YLYCSRATNTTSS 283
            N  NG +N  AH  G     A G ++DSY ++ +QQ  +  SLK           N  S 
Sbjct: 872  NGTNGVTNGTAHVNGHA---ANGHVSDSYVASSLQQGFVYHSLK-----------NELSE 917

Query: 284  GASPGFRHHHKIPIKTTAHHHAF 352
              +     H+ +P+K   +  A+
Sbjct: 918  AYTMQSMIHYGVPLKRDIYQAAW 940

>ZFHX2_HUMAN (Q9C0A1) Zinc finger homeobox protein 2|
          Length = 1427

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 357  LTQDPLVGGALFHSAPDR*SGMIGMATCLLP 449
            L Q PL   A F+S P   SG++G+AT +LP
Sbjct: 1088 LAQPPLGNLAPFNSGPAASSGLLGLATSVLP 1118

>RPOC_LACLA (Q9CEN7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1207

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 56   FNSETPDQTCSHLFQLNLMNGPSNYVAHTIGKLHLKARGE 175
            F  +TP   C H + +NL  G +  V   +G +  ++ GE
Sbjct: 890  FTCKTPHGVCKHCYGINLATGDAVEVGEAVGTIAAQSIGE 929

>PHAR1_CHICK (Q801X6) Phosphatase and actin regulator 1|
          Length = 501

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +2

Query: 269 NTTSSGASPGFRHHHKI-PIKTTAHHHAFAFNTRS---PRRWSSLPFRP 403
           +T  S   P  +HHH + P +  AH H   + + S   P   S+LP  P
Sbjct: 193 STQKSSQQPLTQHHHTVLPSQLAAHQHQLQYGSHSQHLPSGSSTLPIHP 241

>LRC49_HUMAN (Q8IUZ0) Leucine-rich repeat-containing protein 49|
          Length = 685

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 21/76 (27%), Positives = 37/76 (48%)
 Frame = +2

Query: 32  SIEVAEQRFNSETPDQTCSHLFQLNLMNGPSNYVAHTIGKLHLKARGELNDSYNSNQMQQ 211
           S++V +   N  T  +  +HL +L ++N   N+++H      L +  ELN     NQ+  
Sbjct: 179 SLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELN--LRHNQITF 236

Query: 212 VLIQDSLKTK*YLYCS 259
           V   D+L    +L+ S
Sbjct: 237 VRDVDNLPCLQHLFLS 252


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,118,358
Number of Sequences: 219361
Number of extensions: 1311071
Number of successful extensions: 2644
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2644
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)