Clone Name | rbastl33h03 |
---|---|
Clone Library Name | barley_pub |
>gb|AC009738.3| Drosophila melanogaster clone BACR02J10, complete sequence Length = 158491 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 cagatcaaacttgtagccatct 93 |||||||||||||||||||||| Sbjct: 125131 cagatcaaacttgtagccatct 125152
>ref|NM_166371.1| Drosophila melanogaster CG16716-RA, transcript variant A (CG16716), mRNA Length = 2580 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 cagatcaaacttgtagccatct 93 |||||||||||||||||||||| Sbjct: 936 cagatcaaacttgtagccatct 915
>ref|NM_137589.2| Drosophila melanogaster CG16716-RB, transcript variant B (CG16716), mRNA Length = 2680 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 cagatcaaacttgtagccatct 93 |||||||||||||||||||||| Sbjct: 936 cagatcaaacttgtagccatct 915
>gb|AY089393.1| Drosophila melanogaster AT21729 full insert cDNA Length = 2383 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 cagatcaaacttgtagccatct 93 |||||||||||||||||||||| Sbjct: 966 cagatcaaacttgtagccatct 945
>gb|AC099014.1| Drosophila melanogaster, chromosome 2R, region 56D-56D, BAC clone BACR26L01, complete sequence Length = 160106 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 cagatcaaacttgtagccatct 93 |||||||||||||||||||||| Sbjct: 58072 cagatcaaacttgtagccatct 58093
>emb|BX005435.16| Zebrafish DNA sequence from clone CH211-154E15 in linkage group 17, complete sequence Length = 166247 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 191 aatagcaatcaaatgcaacaag 212 |||||||||||||||||||||| Sbjct: 49988 aatagcaatcaaatgcaacaag 50009
>gb|AE003795.3| Drosophila melanogaster chromosome 2R, section 55 of 73 of the complete sequence Length = 248096 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 cagatcaaacttgtagccatct 93 |||||||||||||||||||||| Sbjct: 139097 cagatcaaacttgtagccatct 139076
>emb|CR352220.19| Zebrafish DNA sequence from clone DKEY-148F10 in linkage group 17, complete sequence Length = 174580 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 191 aatagcaatcaaatgcaacaag 212 |||||||||||||||||||||| Sbjct: 148115 aatagcaatcaaatgcaacaag 148094
>gb|AC005148.1|AC005148 Drosophila melanogaster DNA sequence (P1s DS05759 (D204) and DS09033 (D211)), complete sequence Length = 95262 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 cagatcaaacttgtagccatct 93 |||||||||||||||||||||| Sbjct: 81864 cagatcaaacttgtagccatct 81843
>gb|AC100738.8| Mus musculus chromosome 15, clone RP24-362K21, complete sequence Length = 128950 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 aaaaccaaataatacttgtat 253 ||||||||||||||||||||| Sbjct: 55493 aaaaccaaataatacttgtat 55513
>emb|AL627302.20| Mouse DNA sequence from clone RP23-272D10 on chromosome X, complete sequence Length = 191439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 tgaaaaccaaataatacttgt 251 ||||||||||||||||||||| Sbjct: 73776 tgaaaaccaaataatacttgt 73756
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ataatacttgtattgtagca 260 |||||||||||||||||||| Sbjct: 1719335 ataatacttgtattgtagca 1719354
>gb|AC092187.2| Drosophila melanogaster clone BACR23N06, complete sequence Length = 164920 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 acaagattccctgaaaacca 239 |||||||||||||||||||| Sbjct: 122953 acaagattccctgaaaacca 122972
>gb|AC153489.7| Mus musculus 10 BAC RP23-95A4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209653 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tctgggatgattgggatggc 433 |||||||||||||||||||| Sbjct: 160722 tctgggatgattgggatggc 160703
>gb|AC010983.9| Homo sapiens BAC clone RP11-484E10 from 2, complete sequence Length = 189870 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gaaaaccaaataatacttgt 251 |||||||||||||||||||| Sbjct: 95699 gaaaaccaaataatacttgt 95718
>gb|AC016706.6| Homo sapiens BAC clone RP11-215D12 from 2, complete sequence Length = 184121 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ttccctgaaaaccaaataat 245 |||||||||||||||||||| Sbjct: 98452 ttccctgaaaaccaaataat 98433
>gb|AC153492.5| Mus musculus 10 BAC RP23-292N5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195237 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tctgggatgattgggatggc 433 |||||||||||||||||||| Sbjct: 170474 tctgggatgattgggatggc 170493
>gb|AC007765.1|AC007765 Drosophila melanogaster, chromosome 2L, region 23C1-23C5, P1 clones DS02190 and DS00906, complete sequence Length = 163403 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 acaagattccctgaaaacca 239 |||||||||||||||||||| Sbjct: 101136 acaagattccctgaaaacca 101155
>gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10 of 83 of the complete sequence Length = 314957 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 acaagattccctgaaaacca 239 |||||||||||||||||||| Sbjct: 99563 acaagattccctgaaaacca 99544 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,873,388 Number of Sequences: 3902068 Number of extensions: 3873388 Number of successful extensions: 74307 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74276 Number of HSP's gapped (non-prelim): 31 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)