>MSH1_YEAST (P25846) MutS protein homolog 1|
          Length = 959

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = +1

Query: 1   TIHYLKSIWDILTRVQEFHGKALEIQHGSNIVRNYCSSVWTTCTPFLEGLGHMPIRNEG- 177
           T   LK I +++++  E+HG    I   S+  R     +WT     LE L ++ IRNE  
Sbjct: 621 TASSLKKIDELISKSTEYHGSCFHILQKSSQTRWLSHKIWTDLGHELE-LLNLKIRNEEA 679

Query: 178 --VEMIRFLFIDPQN 216
             +++ +  FID  N
Sbjct: 680 NIIDLFKRKFIDRSN 694

>YL100_MIMIV (Q5UPH0) Putative ankyrin repeat protein L100|
          Length = 602

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -1

Query: 228 EKMY--ILRIDKQKPDHFDPFIPYRHMTETFQEWSACSPDR 112
           +K+Y  ILR DK   DH   ++P  +  E FQ   +C P R
Sbjct: 3   QKIYFKILRFDKTHNDHV--YLPGENSVENFQTEGSCVPGR 41

>PARG_HUMAN (Q86W56) Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)|
          Length = 976

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = -1

Query: 231 PEKM-----YILRIDKQKPDHFDPFIPYRHMTETFQEWSACSPDRTTVVSYYVGTM 79
           PEK+     Y  R+ ++KP     F   R   E F EW  C    T +   Y GT+
Sbjct: 673 PEKLKTLFCYFRRVTEKKPTGLVTFT--RQSLEDFPEWERCEKPLTRLHVTYEGTI 726

>PARG_RAT (Q9QYM2) Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)|
          Length = 972

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = -1

Query: 231 PEKM-----YILRIDKQKPDHFDPFIPYRHMTETFQEWSACSPDRTTVVSYYVGTM 79
           PEK+     Y  R+ ++KP     F   R   E F EW  C    T +   Y GT+
Sbjct: 669 PEKLKTLFCYFRRVTEKKPTGLVTFT--RQSLEDFPEWERCDKPLTRLHVTYEGTI 722

>PARG_MOUSE (O88622) Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)|
          Length = 969

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = -1

Query: 231 PEKM-----YILRIDKQKPDHFDPFIPYRHMTETFQEWSACSPDRTTVVSYYVGTM 79
           PEK+     Y  R+ ++KP     F   R   E F EW  C    T +   Y GT+
Sbjct: 666 PEKLKTLFCYFRRVTEKKPTGLVTFT--RQSLEDFPEWERCEKPLTRLHVTYEGTI 719


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,218,800
Number of Sequences: 219361
Number of extensions: 1464721
Number of successful extensions: 3071
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3069
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)