Clone Name | rbastl33g07 |
---|---|
Clone Library Name | barley_pub |
>ACOD_CYPCA (Q92038) Acyl-CoA desaturase (EC 1.14.19.1) (Stearoyl-CoA| desaturase) (Fatty acid desaturase) (Delta(9)-desaturase) Length = 327 Score = 28.1 bits (61), Expect = 5.3 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +3 Query: 270 WLRSHQIHHKYRQTIA 317 W R H++HHKY +T A Sbjct: 120 WSRDHRVHHKYSETDA 135
>TMOE_PSEME (Q00460) Toluene-4-monooxygenase system protein E (EC 1.14.13.-)| Length = 326 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +2 Query: 11 TICPLLINETIVQKSQHSRWKQQLCQSGLSS 103 T+ PLLI+ + +HSRW + L + L + Sbjct: 244 TLLPLLIDSQLKDAERHSRWSKALVKHALEN 274
>ATS20_HUMAN (P59510) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1911 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 9/54 (16%) Frame = -1 Query: 256 EMGVQGPRMVMMVDGSGN*SAQTSYGQNSCSRS---------CVDELYDEDLHY 122 E+ VQG R V+ GS N + NS +R CV LY+ D+HY Sbjct: 786 EINVQGTRTVIEYSGSNNAVERI----NSTNRQEKELILQVLCVGNLYNPDVHY 835
>YO21_CAEEL (P34671) Hypothetical protein ZK688.1| Length = 192 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +3 Query: 189 VCALQFPLPSTIITILGPCTPISPKPFWLRSHQIHHKYRQTI 314 +C L F T+ C P SP P+ +H +H + QT+ Sbjct: 6 LCILYF-----FTTVTQQCAPHSPSPWTKTTHVNNHHHHQTV 42
>PYRG_CHLTR (Q59321) CTP synthase (EC 6.3.4.2) (CTP synthase) (UTP--ammonia| ligase) Length = 539 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -1 Query: 388 GAVSAKRLCPSLLEACFALCCGAAAIVCLY 299 G +SA R C CF +C G A+V Y Sbjct: 361 GKISAARYCRERNIPCFGICLGMQALVVEY 390
>ACO11_TRINI (O44390) Acyl-CoA delta-11 desaturase (EC 1.14.19.-)| (Delta(11)-desaturase) Length = 349 Score = 27.3 bits (59), Expect = 9.0 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +3 Query: 270 WLRSHQIHHKYRQTIA 317 W R H++HHKY T A Sbjct: 119 WAREHRLHHKYSDTDA 134
>CAC1C_RABIT (P15381) Voltage-dependent L-type calcium channel alpha-1C subunit| (Voltage-gated calcium channel alpha subunit Cav1.2) (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (Smooth muscle calcium channel blocker receptor) Length = 2171 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = +3 Query: 213 PSTIITILGPCTPISP-----KPFWLRSHQIHHKYRQTIAAAPQQRAKQ 344 PST+ T+ G +P+SP + W S + H IA A Q+ A Q Sbjct: 1815 PSTVSTVEGHGSPLSPAVRAQEAAWKLSSKRCHSQESQIAMACQEGASQ 1863
>ACOD_BOVIN (Q9TT94) Acyl-CoA desaturase (EC 1.14.19.1) (Stearoyl-CoA| desaturase) (Fatty acid desaturase) (Delta(9)-desaturase) Length = 359 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = +3 Query: 210 LPSTIITILGPCTPISPKPF-WLRSHQIHHKYRQTIA 317 LP + I+G F W R H+ HHK+ +T A Sbjct: 132 LPLRVFLIIGNTMAFQNDVFEWSRDHRAHHKFSETDA 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,321,441 Number of Sequences: 219361 Number of extensions: 932725 Number of successful extensions: 2058 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2028 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2058 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)