ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl33f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RL40_ORYSA (P35296) 60S ribosomal protein L40 (CEP52) 114 8e-26
2RL40_NICSY (P49636) 60S ribosomal protein L40 (CEP52) 108 3e-24
3RL40_BRARA (P51423) 60S ribosomal protein L40 (CEP52) 108 3e-24
4RL40_ARATH (P19232) 60S ribosomal protein L40 (CEP52) 107 5e-24
5RL40_CHLRE (P14695) 60S ribosomal protein L40 (CEP52) 106 1e-23
6RL40_RAT (P62986) 60S ribosomal protein L40 (CEP52) 100 1e-21
7RL40_PIG (P63053) 60S ribosomal protein L40 (CEP52) 100 1e-21
8RL40_OPHHA (P68205) 60S ribosomal protein L40 (CEP52) 100 1e-21
9RL40_MOUSE (P62984) 60S ribosomal protein L40 (CEP52) 100 1e-21
10RL40_HUMAN (P62987) 60S ribosomal protein L40 (CEP52) 100 1e-21
11RL40_FELCA (P63052) 60S ribosomal protein L40 (CEP52) 100 1e-21
12RL40_CHICK (P62985) 60S ribosomal protein L40 (CEP52) 100 1e-21
13RL40_CANFA (P63050) 60S ribosomal protein L40 (CEP52) 100 1e-21
14RL40_BOVIN (P63048) 60S ribosomal protein L40 (CEP52) 100 1e-21
15RL40_ACACA (P49633) 60S ribosomal protein L40 (CEP52) 100 1e-21
16RL40_DROME (P18101) 60S ribosomal protein L40 (CEP52) 98 4e-21
17RL40_SCHPO (P0C015) 60S ribosomal protein L40 (CEP52) 97 1e-20
18RL40_DICDI (P14794) 60S ribosomal protein L40 (CEP52) 96 3e-20
19RL40_YEAST (P14796) 60S ribosomal protein L40 (CEP52) 94 1e-19
20RL40_EIMBO (P46575) 60S ribosomal protein L40 (CEP52) (CEP53) 92 3e-19
21RL40_CRYNE (P40909) 60S ribosomal protein L40 (CEP52) (CEP53) 92 4e-19
22RL40_CAEEL (P49632) 60S ribosomal protein L40 (CEP52) 88 6e-18
23RL40_TETPY (P33190) 60S ribosomal protein L40 (CEP52) (CEP53) 80 9e-16
24RL40_TOBAC (P19379) 60S ribosomal protein L40 (CEP52) 80 2e-15
25RL40_TRYBB (P21899) 60S ribosomal protein L40 (CEP52) 79 4e-15
26RL40_TRYCR (P14795) 60S ribosomal protein L40 (CEP52) 78 5e-15
27RL40_LEITA (P69200) 60S ribosomal protein L40 (CEP52) 77 8e-15
28RL40_LEIMA (P69201) 60S ribosomal protein L40 (CEP52) 77 8e-15
29RL40_PYRAE (Q8ZTH0) 50S ribosomal protein L40e 36 0.020
30RL40_METKA (Q8TXM1) 50S ribosomal protein L40e 36 0.020
31RL40_AERPE (Q9YFY7) 50S ribosomal protein L40e 35 0.045
32RL40_HALMA (Q5UYU5) 50S ribosomal protein L40e 35 0.059
33RL40_METMP (P62026) 50S ribosomal protein L40e 33 0.13
34RL40_SULTO (Q976I5) 50S ribosomal protein L40e 33 0.17
35SPRL_STAAW (P67728) Protein sprT-like 32 0.38
36SPRL_STAAS (Q6G7P7) Protein sprT-like 32 0.38
37SPRL_STAAR (Q6GF11) Protein sprT-like 32 0.38
38SPRL_STAAN (P67727) Protein sprT-like 32 0.38
39SPRL_STAAM (P67726) Protein sprT-like 32 0.38
40SPRL_STAAC (Q5HED9) Protein sprT-like 32 0.38
41RL40_METJA (P54058) 50S ribosomal protein L40e 32 0.50
42RL40_SULSO (Q980V5) 50S ribosomal protein L40e 31 0.84
43RL40_METAC (Q8TJ19) 50S ribosomal protein L40e 30 1.4
44RL40_ARCFU (O28842) 50S ribosomal protein L40e 30 1.9
45ZN335_HUMAN (Q9H4Z2) Zinc finger protein 335 29 3.2
46B3A2_CAVPO (Q9Z0S8) Anion exchange protein 2 (Non-erythroid band... 28 4.2
47RL40_METTH (O26653) 50S ribosomal protein L40e 28 5.5
48STNB_CAEEL (P90761) Putative stoned B-like protein (Unc-41) 28 5.5
49SYL_CAUCR (Q9A217) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... 28 7.2
50B3A2_RABIT (P48746) Anion exchange protein 2 (Non-erythroid band... 28 7.2
51RL40_HALSA (Q9HNJ5) 50S ribosomal protein L40e 27 9.3
52PE38_NPVOP (P32512) Major immediate early protein (PE-38) 27 9.3 
>RL40_ORYSA (P35296) 60S ribosomal protein L40 (CEP52)|
          Length = 53

 Score =  114 bits (284), Expect = 8e-26
 Identities = 52/53 (98%), Positives = 53/53 (100%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIKN 179
           IIEPSLQALARKYNQ+KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIKN
Sbjct: 1   IIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIKN 53
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>RL40_NICSY (P49636) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  108 bits (270), Expect = 3e-24
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL ALARKYNQ+KMICRKCYARLHPRAVNCR+KKCGHSNQLRPKKKIK
Sbjct: 1   IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRRKKCGHSNQLRPKKKIK 52
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>RL40_BRARA (P51423) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  108 bits (270), Expect = 3e-24
 Identities = 50/52 (96%), Positives = 50/52 (96%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL ALARKYNQ KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 1   IIEPSLMALARKYNQAKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 52
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>RL40_ARATH (P19232) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  107 bits (268), Expect = 5e-24
 Identities = 49/52 (94%), Positives = 50/52 (96%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL  LARKYNQ+KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 1   IIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 52
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>RL40_CHLRE (P14695) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  106 bits (265), Expect = 1e-23
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSLQALARKYNQEKMICRKCYARLHPRA NCRKK CGH+NQLRPKKK+K
Sbjct: 1   IIEPSLQALARKYNQEKMICRKCYARLHPRAKNCRKKSCGHTNQLRPKKKLK 52
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>RL40_RAT (P62986) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 1e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_PIG (P63053) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 1e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_OPHHA (P68205) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 1e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_MOUSE (P62984) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 1e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_HUMAN (P62987) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 1e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_FELCA (P63052) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 1e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_CHICK (P62985) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 1e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_CANFA (P63050) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 1e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_BOVIN (P63048) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score =  100 bits (248), Expect = 1e-21
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ LA+KYN +KMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
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>RL40_ACACA (P49633) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 43/52 (82%), Positives = 48/52 (92%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           +IEPSLQ LARKYN +K++CRKCYARLHPRAVNCRKKKCGHSN  RPKKK+K
Sbjct: 1   VIEPSLQVLARKYNCDKVVCRKCYARLHPRAVNCRKKKCGHSNHWRPKKKLK 52
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>RL40_DROME (P18101) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 43/52 (82%), Positives = 48/52 (92%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ LA+KYN +KMICRKCYARLHPRA NCRKKKCGH+N LRPKKK+K
Sbjct: 1   IIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHTNNLRPKKKLK 52
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>RL40_SCHPO (P0C015) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ALA KYN EK ICRKCYARL PRA NCRKKKCGH+NQLRPKKK+K
Sbjct: 1   IIEPSLKALASKYNCEKQICRKCYARLPPRATNCRKKKCGHTNQLRPKKKLK 52
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>RL40_DICDI (P14794) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = -3

Query: 334 IEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKI 185
           IEPSL  LARKY  +KMICRKCYARLHPRAVNCRKKKCGHSN LRPKKK+
Sbjct: 1   IEPSLVILARKYKCDKMICRKCYARLHPRAVNCRKKKCGHSNNLRPKKKL 50
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>RL40_YEAST (P14796) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ALA KYN +K +CRKCYARL PRA NCRK+KCGH+NQLRPKKK+K
Sbjct: 1   IIEPSLKALASKYNCDKSVCRKCYARLPPRATNCRKRKCGHTNQLRPKKKLK 52
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>RL40_EIMBO (P46575) 60S ribosomal protein L40 (CEP52) (CEP53)|
          Length = 53

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 43/53 (81%), Positives = 45/53 (84%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIKN 179
           IIEPSL  LA KYN EK ICRKCYARL PRA NCRKKKCGH++QLRPKKK KN
Sbjct: 1   IIEPSLALLASKYNCEKKICRKCYARLPPRATNCRKKKCGHTSQLRPKKKPKN 53
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>RL40_CRYNE (P40909) 60S ribosomal protein L40 (CEP52) (CEP53)|
          Length = 53

 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 41/52 (78%), Positives = 46/52 (88%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ALA KYN EK ICRKCYARL PRA NCRK+KCGHS+Q+RPKK +K
Sbjct: 1   IIEPSLKALASKYNCEKQICRKCYARLPPRATNCRKRKCGHSSQIRPKKALK 52
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>RL40_CAEEL (P49632) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 87.8 bits (216), Expect = 6e-18
 Identities = 40/52 (76%), Positives = 46/52 (88%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           IIEPSL+ LA+KYN +K ICRKCYARL PRA NCRKKKCGHS++LR KKK+K
Sbjct: 1   IIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSELRIKKKLK 52
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>RL40_TETPY (P33190) 60S ribosomal protein L40 (CEP52) (CEP53)|
          Length = 53

 Score = 80.5 bits (197), Expect = 9e-16
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = -3

Query: 334 IEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           +EP++ ALA+KYN EK +CR CYARL P+A NCRK+KCGHSN LR KKK K
Sbjct: 2   MEPTIAALAKKYNCEKKVCRDCYARLPPKATNCRKRKCGHSNSLRLKKKPK 52
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>RL40_TOBAC (P19379) 60S ribosomal protein L40 (CEP52)|
          Length = 72

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 40/72 (55%), Positives = 47/72 (65%), Gaps = 20/72 (27%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCY--------------------ARLHPRAVNCRKKKCG 218
           IIEPSL+ALA K+N +KMICRKCY                    ARL PRA NCRK+KCG
Sbjct: 1   IIEPSLKALASKFNCDKMICRKCYVRCPRRTPQRTCRVLTWIPQARLPPRATNCRKRKCG 60

Query: 217 HSNQLRPKKKIK 182
           H+N +RPKKK+K
Sbjct: 61  HTNHVRPKKKLK 72
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>RL40_TRYBB (P21899) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 33/52 (63%), Positives = 43/52 (82%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           ++EP+L+ALA+KYN EK +CR+CYARL  RA NCRKK CGH + LR KKK++
Sbjct: 1   VMEPTLEALAKKYNWEKKVCRRCYARLPVRATNCRKKGCGHCSNLRMKKKLR 52
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>RL40_TRYCR (P14795) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 33/52 (63%), Positives = 43/52 (82%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           ++EP+L+ALA+KYN EK +CR+CYARL  RA NCRKK CGH + LR KKK++
Sbjct: 1   VMEPTLEALAKKYNWEKKVCRRCYARLPVRASNCRKKACGHCSNLRMKKKLR 52
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>RL40_LEITA (P69200) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 77.4 bits (189), Expect = 8e-15
 Identities = 33/52 (63%), Positives = 42/52 (80%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           ++EP+L ALA+KYN EK +CR+CYARL  RA NCRKK CGH + LR KKK++
Sbjct: 1   VMEPTLVALAKKYNWEKKVCRRCYARLPVRATNCRKKACGHCSNLRMKKKLR 52
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>RL40_LEIMA (P69201) 60S ribosomal protein L40 (CEP52)|
          Length = 52

 Score = 77.4 bits (189), Expect = 8e-15
 Identities = 33/52 (63%), Positives = 42/52 (80%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 182
           ++EP+L ALA+KYN EK +CR+CYARL  RA NCRKK CGH + LR KKK++
Sbjct: 1   VMEPTLVALAKKYNWEKKVCRRCYARLPVRATNCRKKACGHCSNLRMKKKLR 52
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>RL40_PYRAE (Q8ZTH0) 50S ribosomal protein L40e|
          Length = 53

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = -3

Query: 334 IEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 191
           ++P   A+  K+  +  ICR+C A+  P AV CR+ +   S  LRPK+
Sbjct: 5   LDPEKLAIVMKHRFQYKICRECGAKNPPDAVKCRRCR---SRNLRPKR 49
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>RL40_METKA (Q8TXM1) 50S ribosomal protein L40e|
          Length = 49

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 22/44 (50%), Positives = 27/44 (61%)
 Frame = -3

Query: 319 QALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 188
           +A AR +N  K+IC KC AR  P A  CR  KCG+   LRPK +
Sbjct: 6   EAEARIFN--KLICMKCNARNPPDATKCR--KCGYKG-LRPKAR 44
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>RL40_AERPE (Q9YFY7) 50S ribosomal protein L40e|
          Length = 50

 Score = 35.0 bits (79), Expect = 0.045
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = -3

Query: 337 IIEPSLQALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 188
           I +P L A+  K    K +CR+C A     A  CR+ +   S  LRPKKK
Sbjct: 3   ITDPELVAIFEKRVLNKKVCRRCGALNPMSATKCRRCR---SKNLRPKKK 49
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>RL40_HALMA (Q5UYU5) 50S ribosomal protein L40e|
          Length = 49

 Score = 34.7 bits (78), Expect = 0.059
 Identities = 19/34 (55%), Positives = 21/34 (61%)
 Frame = -3

Query: 289 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 188
           K IC +C AR   RA  CR  KCG+ N LRPK K
Sbjct: 14  KQICMRCNARNPQRAQQCR--KCGYGN-LRPKAK 44
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>RL40_METMP (P62026) 50S ribosomal protein L40e|
          Length = 47

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = -3

Query: 289 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 188
           K IC KC +R   +A  CR  KCG++N LRPK K
Sbjct: 13  KKICMKCNSRNSWKATKCR--KCGYTN-LRPKAK 43
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>RL40_SULTO (Q976I5) 50S ribosomal protein L40e|
          Length = 56

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 18/34 (52%), Positives = 20/34 (58%)
 Frame = -3

Query: 289 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 188
           K +CR C A    RA  CR  +C HS  LRPKKK
Sbjct: 19  KKVCRDCGALNSVRATKCR--RC-HSKNLRPKKK 49
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>SPRL_STAAW (P67728) Protein sprT-like|
          Length = 151

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -3

Query: 325 SLQALARKYNQEKMICRKCYAR-LHPRAVNCRKKKCGHSN-QLRPKKKIK 182
           S+++  ++ N E   C KC+A+ +  R V+  + +CGH N +LR K+++K
Sbjct: 103 SIESYQQRANYE-YYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK 151
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>SPRL_STAAS (Q6G7P7) Protein sprT-like|
          Length = 151

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -3

Query: 325 SLQALARKYNQEKMICRKCYAR-LHPRAVNCRKKKCGHSN-QLRPKKKIK 182
           S+++  ++ N E   C KC+A+ +  R V+  + +CGH N +LR K+++K
Sbjct: 103 SIESYQQRANYE-YYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK 151
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>SPRL_STAAR (Q6GF11) Protein sprT-like|
          Length = 151

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -3

Query: 325 SLQALARKYNQEKMICRKCYAR-LHPRAVNCRKKKCGHSN-QLRPKKKIK 182
           S+++  ++ N E   C KC+A+ +  R V+  + +CGH N +LR K+++K
Sbjct: 103 SIESYQQRANYE-YYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK 151
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>SPRL_STAAN (P67727) Protein sprT-like|
          Length = 151

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -3

Query: 325 SLQALARKYNQEKMICRKCYAR-LHPRAVNCRKKKCGHSN-QLRPKKKIK 182
           S+++  ++ N E   C KC+A+ +  R V+  + +CGH N +LR K+++K
Sbjct: 103 SIESYQQRANYE-YYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK 151
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>SPRL_STAAM (P67726) Protein sprT-like|
          Length = 151

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -3

Query: 325 SLQALARKYNQEKMICRKCYAR-LHPRAVNCRKKKCGHSN-QLRPKKKIK 182
           S+++  ++ N E   C KC+A+ +  R V+  + +CGH N +LR K+++K
Sbjct: 103 SIESYQQRANYE-YYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK 151
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>SPRL_STAAC (Q5HED9) Protein sprT-like|
          Length = 151

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = -3

Query: 325 SLQALARKYNQEKMICRKCYAR-LHPRAVNCRKKKCGHSN-QLRPKKKIK 182
           S+++  ++ N E   C KC+A+ +  R V+  + +CGH N +LR K+++K
Sbjct: 103 SIESYQQRANYE-YYCTKCHAKYIRIRKVDTNRMRCGHCNGKLRMKRQLK 151
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>RL40_METJA (P54058) 50S ribosomal protein L40e|
          Length = 47

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 18/34 (52%), Positives = 20/34 (58%)
 Frame = -3

Query: 289 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 188
           K IC +C AR   RA  CR  KCG+   LRPK K
Sbjct: 13  KKICMRCNARNPWRATKCR--KCGYKG-LRPKAK 43
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>RL40_SULSO (Q980V5) 50S ribosomal protein L40e|
          Length = 56

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 18/34 (52%), Positives = 20/34 (58%)
 Frame = -3

Query: 289 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 188
           K +CRKC A    RA  CR  +C HS  LR KKK
Sbjct: 19  KKVCRKCGALNPIRATKCR--RC-HSTNLRLKKK 49
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>RL40_METAC (Q8TJ19) 50S ribosomal protein L40e|
          Length = 49

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/34 (52%), Positives = 19/34 (55%)
 Frame = -3

Query: 289 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 188
           K IC KC AR   RA  CR  KCG+   LR K K
Sbjct: 14  KKICMKCNARNAIRATRCR--KCGYGT-LRVKSK 44
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>RL40_ARCFU (O28842) 50S ribosomal protein L40e|
          Length = 49

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = -3

Query: 319 QALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 188
           +A AR +N +  IC +C AR   +A  CR  KCG+   LRPK K
Sbjct: 6   EAEARLFNVK--ICMRCNARNPMKARVCR--KCGYKG-LRPKSK 44
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>ZN335_HUMAN (Q9H4Z2) Zinc finger protein 335|
          Length = 1342

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = -2

Query: 356 PQAPRRHHRAVPAGACPQVQPGEDDLPQMLCAPAPKG 246
           PQ    H      GA  + Q G  DLPQ+  AP P G
Sbjct: 841 PQVVTLHVAEPGGGAAAESQLGPPDLPQITLAPGPFG 877
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>B3A2_CAVPO (Q9Z0S8) Anion exchange protein 2 (Non-erythroid band 3-like|
           protein) (AE2 anion exchanger) (Solute carrier family 4
           member 2)
          Length = 1238

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 347 PRRHHRAVPAGACPQVQPGEDDLPQMLCAPAP 252
           PRR   A PAG  P ++ GE+D  +   A  P
Sbjct: 106 PRRRPGATPAGETPTIEEGEEDEDETSEAEGP 137
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>RL40_METTH (O26653) 50S ribosomal protein L40e|
          Length = 48

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/32 (53%), Positives = 18/32 (56%)
 Frame = -3

Query: 283 ICRKCYARLHPRAVNCRKKKCGHSNQLRPKKK 188
           IC KC AR  P A  CR  KCG+   LR K K
Sbjct: 16  ICLKCNARNPPTAKTCR--KCGYKG-LRYKAK 44
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>STNB_CAEEL (P90761) Putative stoned B-like protein (Unc-41)|
          Length = 1657

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -2

Query: 365 PSRPQAPRRHHRAVPAGACPQVQPGEDDLPQMLCAPAP 252
           P+RP+AP++   AV A A P+  P     P     PAP
Sbjct: 691 PARPEAPKKDETAVDAAAPPRPPPAARPPPP---RPAP 725
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>SYL_CAUCR (Q9A217) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 861

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +2

Query: 242 DSPWVQARIAFAAD--HLLLVVLAGKRLQGRLDDASAEPEDEM 364
           D+PW +A  A AAD   +L + + GKR +G +   +  P+DE+
Sbjct: 785 DAPWPKADPALAADDERVLPIQINGKR-RGEIKVKAGAPDDEV 826
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>B3A2_RABIT (P48746) Anion exchange protein 2 (Non-erythroid band 3-like|
           protein) (AE2 anion exchanger) (Solute carrier family 4
           member 2) (B3RP)
          Length = 1237

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 347 PRRHHRAVPAGACPQVQPGEDD 282
           PRR   A P GA P ++ GE+D
Sbjct: 106 PRRRPGASPTGATPTIEEGEED 127
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>RL40_HALSA (Q9HNJ5) 50S ribosomal protein L40e|
          Length = 47

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 289 KMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 194
           K +C +C AR    A +CR  KCG+ N LR K
Sbjct: 12  KQVCMRCNARNPTDAESCR--KCGYKN-LRTK 40
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>PE38_NPVOP (P32512) Major immediate early protein (PE-38)|
          Length = 307

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 153 MDWLNPSPCQSLFCYRLVV 97
           +D+L PS C  LFCY+ V+
Sbjct: 54  IDFLMPSECTHLFCYKCVL 72


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,381,182
Number of Sequences: 219361
Number of extensions: 624632
Number of successful extensions: 2093
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 2030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2091
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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