Clone Name | rbastl33f06 |
---|---|
Clone Library Name | barley_pub |
>LIN12_CAEEL (P14585) Protein lin-12 precursor (Abnormal cell lineage protein 12)| Length = 1429 Score = 30.4 bits (67), Expect = 1.9 Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Frame = +2 Query: 11 IIITCAKLEGGTPRNRSILRVRIQESSIQN--RNKKYHKSMDSLQHNIITEVWDN*IFHS 184 +++ L G R R ++ + ++N +N+K H+S+ S QH+++ +D I Sbjct: 922 VVLMLGALPGNRTRKRRMINASVWMPPMENEEKNRKNHQSITSSQHSLLEASYDGYIKRQ 981 Query: 185 KHAEQ 199 ++ Q Sbjct: 982 RNELQ 986
>HEMA_PTV10 (Q70KP1) Hemagglutinin-esterase homolog precursor (EC 3.1.1.53)| (HE) Length = 430 Score = 30.4 bits (67), Expect = 1.9 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = -1 Query: 233 LVLFGSICDHST--VLRVWNGIFSCPKLLLLYCAADYPCF-YGTFCCDFGY 90 LV+F S+ ST VL + FSC K L+ +C D CF C FGY Sbjct: 183 LVIFNSVVKVSTQFVLPSSSDGFSCTKHLVPFCYIDGGCFEMSGVCYPFGY 233
>PHLC_CLOHA (P59026) Phospholipase C precursor (EC 3.1.4.3) (PLC)| (Phosphatidylcholine cholinephosphohydrolase) (Beta toxin) Length = 399 Score = 30.0 bits (66), Expect = 2.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +2 Query: 242 WRRTGAKQLTELLNLGLHLRGEMQPPYLP*NL 337 W++ +Q T LL GLH G+ PY P N+ Sbjct: 136 WKKGNYEQATWLLGQGLHYFGDFHTPYHPSNV 167
>CARD9_RAT (Q9EPY0) Caspase recruitment domain-containing protein 9 (rCARD9)| Length = 536 Score = 29.6 bits (65), Expect = 3.2 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%) Frame = +2 Query: 50 RNRSILRVRIQESSIQNRNKKYHKSMDSLQHNIITEVWDN*IFHSKHAEQLSG----RK* 217 + R +L+ R+QE + + K H++ +Q ++ E W + +H EQ S RK Sbjct: 252 QERDLLQARVQELEVSVQEGKLHRNSPYIQ--VLEEDWRQAL--QEHQEQASTIFSLRKD 307 Query: 218 IQTALAATWRRTGAKQLTELLNLGLHLRGEM 310 ++ A A R K++ EL L L +M Sbjct: 308 LRQAEALRTRCMEEKEMFELQCLALRKDAKM 338
>ALG14_YARLI (Q6CF02) UDP-N-acetylglucosamine transferase subunit ALG14 (EC| 2.4.1.-) (Asparagine linked glycosylation protein 14) Length = 216 Score = 29.6 bits (65), Expect = 3.2 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Frame = -2 Query: 175 YLVVPNFCYYIVLQTIHAFMVLFVAILDTRFLYSDS----KDASISGRAAFQFC 26 +++V N V+ AF++ F+A++DTR +Y +S S+SG FC Sbjct: 139 HVIVCNGPATCVMLCYAAFLLRFMALIDTRIIYVESLARVNRLSLSGLILLPFC 192
>CMB2_DIACA (Q42498) MADS-box protein CMB2| Length = 214 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +2 Query: 32 LEGGTPRNRSILRVRIQESSIQNRNKKYH 118 LEG T S L+ ++E+ IQ RNKKYH Sbjct: 113 LEGLTLVELSALQQEMEEAIIQIRNKKYH 141
>FAS1_YARLI (P34229) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2. Length = 2086 Score = 28.1 bits (61), Expect = 9.4 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 14/89 (15%) Frame = -1 Query: 314 VAFPPSSA-TLSSVVQLVALPPSFARLLLVLFG------SICD-HSTVLRVWNGIFSCPK 159 +AF P S +SSV+++ P F +L G S D H+ +L++++ I C Sbjct: 714 IAFKPGSIEAISSVIRIAKANPDFPIILQWTGGRGGGHHSFEDFHAPILQMYSKIRRCSN 773 Query: 158 LLLLYCAA------DYPCFYGTFCCDFGY 90 ++L+ + YP G++ DF Y Sbjct: 774 IVLIAGSGFGASTDSYPYLTGSWSRDFDY 802
>VG6_SPV4 (P11338) Gene 6 protein| Length = 71 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +3 Query: 30 NWKAARPEIEASLESEYRNRVSKIATKSTIKAWIVCSTI 146 NW + +E +E YR K+ KS K IVC I Sbjct: 29 NWLTNQLALEKEIEQGYRCETCKLVIKSVNKDEIVCKCI 67
>PANX2_RAT (P60571) Pannexin-2| Length = 664 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +1 Query: 277 TELRVALEGGNATTLPTLKSHRMLNYVTGALTPISIEVAL 396 TELR AL G +A+ P+L H+ L Y A I AL Sbjct: 91 TELRDALPGVDASLWPSLFEHKFLPYALLAFAAIMYVPAL 130
>PANX2_MOUSE (Q6IMP4) Pannexin-2| Length = 607 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +1 Query: 277 TELRVALEGGNATTLPTLKSHRMLNYVTGALTPISIEVAL 396 TELR AL G +A+ P+L H+ L Y A I AL Sbjct: 91 TELRDALPGVDASLWPSLFEHKFLPYALLAFAAIMYVPAL 130
>PHLC_CLOBI (P20419) Phospholipase C precursor (EC 3.1.4.3) (PLC)| (Phosphatidylcholine cholinephosphohydrolase) (Cbp) Length = 398 Score = 28.1 bits (61), Expect = 9.4 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +2 Query: 242 WRRTGAKQLTELLNLGLHLRGEMQPPY 322 W + K+ T LL GLH G++ PY Sbjct: 135 WEKGNFKEATFLLGQGLHYLGDLNTPY 161
>PANX2_HUMAN (Q96RD6) Pannexin-2| Length = 633 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +1 Query: 277 TELRVALEGGNATTLPTLKSHRMLNYVTGALTPISIEVAL 396 TELR AL G +A+ P+L H+ L Y A I AL Sbjct: 91 TELRDALPGVDASLWPSLFEHKFLPYALLAFAAIMYVPAL 130
>Y1135_THETN (Q8RAR7) UPF0082 protein TTE1135| Length = 243 Score = 28.1 bits (61), Expect = 9.4 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = +1 Query: 244 AKDGGKATN*TTELRVALEGGNATTLPTLKSHRMLNYVTGALTPISI-EVALHGY 405 AK+GG ++L++A+E A LP+ R + TG L + EV GY Sbjct: 36 AKEGGGDPETNSKLKLAIERAKAFNLPSENIQRAIKRGTGELGGAKLEEVIYEGY 90
>PHLC_CLOSO (Q8VUZ6) Phospholipase C precursor (EC 3.1.4.3) (PLC)| (Phosphatidylcholine cholinephosphohydrolase) Length = 399 Score = 28.1 bits (61), Expect = 9.4 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +2 Query: 242 WRRTGAKQLTELLNLGLHLRGEMQPPY 322 W++ K+ T LL G+H G++ PY Sbjct: 137 WKKGNYKEATFLLGQGMHYLGDLNTPY 163 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,761,066 Number of Sequences: 219361 Number of extensions: 1180307 Number of successful extensions: 3528 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3462 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3528 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)