>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 356     taacaggagctctaacgcctatttcca 382
               ||||||||| |||||||||||||||||
Sbjct: 2724991 taacaggagttctaacgcctatttcca 2724965

>dbj|AK060480.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-G08, full
            insert sequence
          Length = 1436

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 356  taacaggagctctaacgcctatttcca 382
            ||||||||| |||||||||||||||||
Sbjct: 1113 taacaggagttctaacgcctatttcca 1087

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 356     taacaggagctctaacgcctatttcca 382
               ||||||||| |||||||||||||||||
Sbjct: 2724935 taacaggagttctaacgcctatttcca 2724909

>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 145539

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 356    taacaggagctctaacgcctatttcca 382
              ||||||||| |||||||||||||||||
Sbjct: 145456 taacaggagttctaacgcctatttcca 145482

>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151878

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 356   taacaggagctctaacgcctatttcca 382
             ||||||||| |||||||||||||||||
Sbjct: 93917 taacaggagttctaacgcctatttcca 93891

>emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chromosome 4, complete
              sequence
          Length = 169474

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 104    aacaaaaagtaccataaaagcatgga 129
              ||||||||||||| ||||||||||||
Sbjct: 140385 aacaaaaagtaccctaaaagcatgga 140410

>gb|AC152953.1| Mus musculus 10 BAC RP23-403E19 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 211343

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   actgaactactgaacttaggg 289
             |||||||||||||||||||||
Sbjct: 54803 actgaactactgaacttaggg 54783

>gb|AC105395.1| Homo sapiens chromosome 4 clone RP11-397A19, complete sequence
          Length = 162281

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     attatcaactattatcatcac 21
             |||||||||||||||||||||
Sbjct: 34291 attatcaactattatcatcac 34271

>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 404    acctttttgtttaatgacttg 424
              |||||||||||||||||||||
Sbjct: 947641 acctttttgtttaatgacttg 947621

>gb|AC096647.1| Homo sapiens BAC clone RP11-2G16 from 2, complete sequence
          Length = 146935

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 344   tgctgaactatgtaacaggag 364
             |||||||||||||||||||||
Sbjct: 45335 tgctgaactatgtaacaggag 45355

>emb|BX004966.12| Zebrafish DNA sequence from clone DKEY-5E12 in linkage group 19, complete
              sequence
          Length = 134336

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 11     attatcatcacatgtgcaaaa 31
              |||||||||||||||||||||
Sbjct: 105209 attatcatcacatgtgcaaaa 105229

>ref|NM_119662.2| Arabidopsis thaliana peptidyl-prolyl cis-trans isomerase AT4G34960
            mRNA, complete cds
          Length = 1183

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   atcatcacatgtgcaaaact 33
            ||||||||||||||||||||
Sbjct: 1038 atcatcacatgtgcaaaact 1019

>gb|AC160017.2| Mus musculus BAC clone RP23-172C19 from chromosome 9, complete sequence
          Length = 189417

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   caaacagcactagcagcaac 240
             ||||||||||||||||||||
Sbjct: 77236 caaacagcactagcagcaac 77217

>gb|AC144672.2| Mus musculus BAC clone RP23-287L2 from chromosome 18, complete sequence
          Length = 139404

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 9     ctattatcatcacatgtgcaaaac 32
             ||||||||||||||||||| ||||
Sbjct: 84673 ctattatcatcacatgtgctaaac 84650

>gb|AC122459.2| Mus musculus BAC clone RP24-273F21 from chromosome 15, complete
             sequence
          Length = 156807

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   acctttttgtttaatgactt 423
             ||||||||||||||||||||
Sbjct: 75034 acctttttgtttaatgactt 75053

>emb|AL450398.9| Human DNA sequence from clone RP11-202P11 on chromosome 10 Contains
            the 3'end of a novel gene containing FLJ40604 and
            FLJ40930, complete sequence
          Length = 55063

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 403  tacctttttgtttaatgact 422
            ||||||||||||||||||||
Sbjct: 2088 tacctttttgtttaatgact 2107

>emb|AL031295.1|HS886K2 Human DNA sequence from clone RP5-886K2 on chromosome 1p35.1-36.12
             Contains a neuronal thread protein (AD7C-NTP) pseudogene,
             the TCEB3 gene for  transcription elongation factor B
             (SIII), polypeptide 3 (110kDa, elongin A), two novel
             genes, a novel gene (HT014), the LYPLA2  gene for
             lysophospholipase II, the GALE gene for
             UDP-galactose-4-epimerase and the HMGCL gene for
             3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase
             (hydroxymethylglutaricaciduria), complete sequence
          Length = 124001

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   ataataacagaagtttggga 165
             ||||||||||||||||||||
Sbjct: 29397 ataataacagaagtttggga 29378

>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces
              hansenii
          Length = 1592360

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     tatccaaaatcgcaacaaaa 110
              ||||||||||||||||||||
Sbjct: 331003 tatccaaaatcgcaacaaaa 330984

>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82
          Length = 195165

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     atcatcacatgtgcaaaact 33
              ||||||||||||||||||||
Sbjct: 105532 atcatcacatgtgcaaaact 105513

>emb|AL079347.1|ATF11I11 Arabidopsis thaliana DNA chromosome 4, BAC clone F11I11 (ESSA project)
          Length = 103150

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    atcatcacatgtgcaaaact 33
             ||||||||||||||||||||
Sbjct: 76073 atcatcacatgtgcaaaact 76054

>emb|AL022023.1|ATM4E13 Arabidopsis thaliana DNA chromosome 4, BAC clone M4E13 (ESSAII
            project)
          Length = 80346

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   atcatcacatgtgcaaaact 33
            ||||||||||||||||||||
Sbjct: 6565 atcatcacatgtgcaaaact 6546

>gb|AC068112.5| Homo sapiens chromosome 18, clone RP11-526H11, complete sequence
          Length = 165840

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    accaccctacctaccttgaa 332
              ||||||||||||||||||||
Sbjct: 113094 accaccctacctaccttgaa 113075

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 12       ttatcatcacatgtgcaaaa 31
                ||||||||||||||||||||
Sbjct: 27058310 ttatcatcacatgtgcaaaa 27058291

>gb|AF052857.1|AF052857 Dicentra eximia PISTILLATA homolog DePI-1 mRNA, partial cds
          Length = 894

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 375 tatttccatagaagttgcccttca 398
           |||||||||||||| |||||||||
Sbjct: 318 tatttccatagaagatgcccttca 341

>gb|AC022336.12| Homo sapiens 3 BAC RP11-71H17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166071

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 75     gaatacaggaatcgagtatccaaa 98
              |||||||||||| |||||||||||
Sbjct: 125805 gaatacaggaatggagtatccaaa 125828

>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0473H04
          Length = 155204

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ttatcatcacatgtgcaaaa 31
             ||||||||||||||||||||
Sbjct: 27120 ttatcatcacatgtgcaaaa 27101

>dbj|AK117671.1| Arabidopsis thaliana At4g34960 mRNA for cyclophilin like protein
            (ROC14), putative, complete cds, clone: RAFL17-33-L10
          Length = 1184

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   atcatcacatgtgcaaaact 33
            ||||||||||||||||||||
Sbjct: 1039 atcatcacatgtgcaaaact 1020

>emb|CR318601.8| Zebrafish DNA sequence from clone CH211-274E20 in linkage group 7,
             complete sequence
          Length = 165501

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    acatgtgcaaaactggaagg 39
             ||||||||||||||||||||
Sbjct: 43735 acatgtgcaaaactggaagg 43754


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,854,850
Number of Sequences: 3902068
Number of extensions: 3854850
Number of successful extensions: 67303
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67177
Number of HSP's gapped (non-prelim): 126
length of query: 431
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 409
effective length of database: 17,147,199,772
effective search space: 7013204706748
effective search space used: 7013204706748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)