>SPL15_ARATH (Q9M2Q6) Squamosa promoter-binding-like protein 15|
          Length = 354

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 226 LGPVK*SFTPPKSMRDGSSTYTTFPATITRTETSSASLLSILCNGF 363
           + PV+ +      +  GSS++TT P  I    T S+  LS+L N +
Sbjct: 185 INPVRETHPHMNVLSHGSSSFTTCPEMINNNSTDSSCALSLLSNSY 230

>CHIA1_BACCI (P20533) Chitinase A1 precursor (EC 3.2.1.14)|
          Length = 699

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 387 RTWDACARKAIAEYAQKTGGGSFSSSYGCWES 292
           R WD CA+    +Y   TGG    SS G WE+
Sbjct: 340 RGWDGCAQAGNGQYQTCTGG----SSVGTWEA 367

>ERG7_CANAL (Q04782) Lanosterol synthase (EC 5.4.99.7)|
           (Oxidosqualene--lanosterol cyclase)
           (2,3-epoxysqualene--lanosterol cyclase) (OSC)
          Length = 728

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 19  YNYLDTEGVFTHNCSYQSE*YSTKGPLTIKLTVSFYKYKYNHK 147
           + Y D EGVF H+C+ +   Y    P+     +  YK KY  K
Sbjct: 686 WKYEDIEGVFNHSCAIEYPSYRFLFPIK---ALGLYKNKYGDK 725

>ETF2_FOWPV (Q9J562) Early transcription factor 82 kDa subunit (VETF large|
           subunit)
          Length = 709

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 21/92 (22%), Positives = 40/92 (43%)
 Frame = +1

Query: 82  STKGPLTIKLTVSFYKYKYNHKYSTHVFAQLLC*IKVGKYNHLGIATVLGPVK*SFTPPK 261
           S+  P  +K++ +FYK      +  +      C  K GKYN++G   +   ++    P  
Sbjct: 383 SSLEPDMLKVSDNFYKSPTKEVFVNNNEVMFTCDDKTGKYNNIGFLAIFYKLQKICIPCC 442

Query: 262 SMRDGSSTYTTFPATITRTETSSASLLSILCN 357
            +++ S T  TF A +   +T    +   + N
Sbjct: 443 FLKNQSHT-DTFMACVHNKQTDKNIISPYILN 473

>CCG6_NEUCR (Q01302) Clock-controlled protein 6|
          Length = 142

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 10/54 (18%)
 Frame = +1

Query: 256 PKSMRDGSSTYTTF----------PATITRTETSSASLLSILCNGFARTSVPRP 387
           P  +  G +TYT            P T+T+   +++S++   C G+  +++P P
Sbjct: 38  PTEITHGGNTYTVTEATTLTISDCPCTVTKPIITTSSVICHSCTGYVNSTIPAP 91

>PTH_WIGBR (Q8D2K4) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 191

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +1

Query: 4   LVLPNYNYLDTEGVFTHNCSYQSE*YSTKGPLT---IKLTVSFYKYKYNHKYSTH 159
           LV+P+  Y++  G   +N +   + YS +  +    + L     ++K+NHK STH
Sbjct: 61  LVIPD-TYMNVNGTIIYNITNFYKIYSNEMLIVHDDLDLDTGIARFKFNHKNSTH 114

>GLNA3_PHAVU (P00965) Glutamine synthetase N-1 (EC 6.3.1.2) (Gln isozyme gamma)|
           (Glutamate--ammonia ligase)
          Length = 356

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 9/65 (13%)
 Frame = +1

Query: 220 TVLGPVK*SFTPPKSMRDGSST---------YTTFPATITRTETSSASLLSILCNGFART 372
           T+ GPVK     PK   DGSST            +P TI R      + + ++C+ +   
Sbjct: 39  TLSGPVKDPSKLPKWNYDGSSTGQAPGQDSEVILYPQTIFRDPFRRGNNILVMCDAYTPA 98

Query: 373 SVPRP 387
             P P
Sbjct: 99  GEPIP 103

>ENV_HV1Z6 (P04580) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 855

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 376 RLCAQSHCRVCSEDWRRKFQFELWLLGKL 290
           ++  Q+HC +  EDW +  Q     LG L
Sbjct: 325 KIIGQAHCNISKEDWNKTLQRVAIKLGNL 353

>KO1_GIBFU (O94142) Ent-kaurene oxidase (EC 1.14.13.78) (Cytochrome P450-4)|
           (Cytochrome P450 503A1)
          Length = 525

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = +2

Query: 71  LNNIAQKGL*LSS*QLASINISTITNTAHMYLLNCCAE 184
           ++NIAQ+ L LS   LASI+ + +T T  MY L  C E
Sbjct: 303 IDNIAQRMLILS---LASIHTTAMTMTHAMYDLCACPE 337

>ATR_DROME (Q9VXG8) Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia|
           telangiectasia and Rad3-related protein homolog) (ATR
           homolog) (dATR) (Meiotic protein 41)
          Length = 2517

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = -1

Query: 373 LCAQSHCRVCS--EDWRRKFQ--FELWLLGKLCRCL 278
           LC +     CS   +   KFQ  F LWLL KL +CL
Sbjct: 34  LCQEPSLISCSLVRELHNKFQDTFLLWLLNKLAKCL 69

>TOP1_PYRFU (O73954) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase) [Contains: Endonuclease PI-PfuI (EC 3.1.-.-)
           (Pfu topA intein)]
          Length = 1060

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 1   NLVLPNYNYLDTEGVFTHNCSY 66
           +LV+ NY+     G+  HNCSY
Sbjct: 669 DLVVENYHNFIANGIAVHNCSY 690


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,791,815
Number of Sequences: 219361
Number of extensions: 981350
Number of successful extensions: 2257
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2257
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)