Clone Name | rbastl33e09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163 | 30 | 1.8 | 2 | PKHA6_HUMAN (Q9Y2H5) Pleckstrin homology domain-containing famil... | 28 | 5.2 | 3 | PKHA6_MOUSE (Q7TQG1) Pleckstrin homology domain-containing famil... | 28 | 5.2 | 4 | ALDH_ENCBU (Q27640) Aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyd... | 27 | 8.9 |
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>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163| Length = 1693 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/31 (48%), Positives = 22/31 (70%) Frame = -2 Query: 334 NVERERETLLRSAIVYPLVCLLLAVKI*GQD 242 N+E++ + +L+ +VYPL LL AVK GQD Sbjct: 942 NLEKQCQFILKQFLVYPLEALLAAVKT-GQD 971
>PKHA6_HUMAN (Q9Y2H5) Pleckstrin homology domain-containing family A member 6| (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3) Length = 1048 Score = 28.1 bits (61), Expect = 5.2 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -2 Query: 64 KQWQRRWYMYVRSCLMCY 11 KQW +RW++ V CL Y Sbjct: 75 KQWNKRWFVLVDRCLFYY 92
>PKHA6_MOUSE (Q7TQG1) Pleckstrin homology domain-containing family A member 6| (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3) Length = 1173 Score = 28.1 bits (61), Expect = 5.2 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -2 Query: 64 KQWQRRWYMYVRSCLMCY 11 KQW +RW++ V CL Y Sbjct: 75 KQWNKRWFVLVDRCLFYY 92
>ALDH_ENCBU (Q27640) Aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde| dehydrogenase [NAD+]) Length = 497 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -1 Query: 248 PRFIITVAPA*MHA*SLALPNHPDVN 171 P +I + P H AL NHPD+N Sbjct: 212 PAGVINIVPGLGHTAGAALTNHPDIN 237 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,108,371 Number of Sequences: 219361 Number of extensions: 522892 Number of successful extensions: 954 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 944 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 954 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)