ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl33e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PPNK_BURPS (Q63R41) Probable inorganic polyphosphate/ATP-NAD kin... 32 0.91
2PPNK_BURMA (Q62HC9) Probable inorganic polyphosphate/ATP-NAD kin... 32 0.91
3PPNK_BURS3 (Q39JD3) Probable inorganic polyphosphate/ATP-NAD kin... 31 1.2
4PPNK_BURP1 (Q3JP04) Probable inorganic polyphosphate/ATP-NAD kin... 31 1.2
5MATK_WATAN (Q4H174) Maturase K (Intron maturase) 29 4.5
6ENPP3_HUMAN (O14638) Ectonucleotide pyrophosphatase/phosphodiest... 29 5.9
7YO019_YEAST (Q99248) Uncharacterized protein YOR019W 28 7.7

>PPNK_BURPS (Q63R41) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 300

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 48  SYRVLFLTRTADVHGYSHTARRLSSTTYNKYLYQRKKLQWDERISTHK 191
           S+  L L  T +V    HT   L    Y+ Y   RKKL W+E  S+ +
Sbjct: 249 SFTALELNDTIEVRRSKHTVPFLHPVGYSYYATLRKKLHWNEHPSSEE 296



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>PPNK_BURMA (Q62HC9) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 300

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 48  SYRVLFLTRTADVHGYSHTARRLSSTTYNKYLYQRKKLQWDERISTHK 191
           S+  L L  T +V    HT   L    Y+ Y   RKKL W+E  S+ +
Sbjct: 249 SFTALELNDTIEVRRSKHTVPFLHPVGYSYYATLRKKLHWNEHPSSEE 296



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>PPNK_BURS3 (Q39JD3) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 300

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +3

Query: 48  SYRVLFLTRTADVHGYSHTARRLSSTTYNKYLYQRKKLQWDERIS 182
           S+  L L  T +V    HT   L    Y+ Y   RKKL W+E  S
Sbjct: 249 SFTALELNDTIEVRRSKHTVPFLHPIGYSYYATLRKKLHWNEHAS 293



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>PPNK_BURP1 (Q3JP04) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 300

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 48  SYRVLFLTRTADVHGYSHTARRLSSTTYNKYLYQRKKLQWDERIST 185
           S+  L L  T +V    HT   L    Y+ Y   RKKL W+E  S+
Sbjct: 249 SFTALELNDTIEVRRSKHTVPFLHPVGYSYYATLRKKLHWNEHPSS 294



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>MATK_WATAN (Q4H174) Maturase K (Intron maturase)|
          Length = 522

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +3

Query: 48  SYRVLFLTRTADVHGYSHTARRLSSTTYNKYLYQRKKLQWDERISTHKKWYTTMRTESER 227
           ++   F+T+   ++ +S   +RL    YN Y+Y+ + L    R  +    +T+ RT  ER
Sbjct: 196 NWNSFFITQNKSIYLFSKETKRLFRFLYNSYVYECEFLFVFLRKHSSYLRFTSFRTFLER 255

Query: 228 FY 233
            Y
Sbjct: 256 RY 257



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>ENPP3_HUMAN (O14638) Ectonucleotide pyrophosphatase/phosphodiesterase 3 (E-NPP|
           3) (Phosphodiesterase I/nucleotide pyrophosphatase 3)
           (Phosphodiesterase I beta) (PD-Ibeta) (CD203c antigen)
           [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1);
           Nucleotide p
          Length = 875

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 138 YLYQRKKLQWDERISTHKKWYTTMRTESERFYT 236
           Y+     + ++ERIST  KW    + E  RFYT
Sbjct: 286 YMPYNGSVPFEERISTLLKWLDLPKAERPRFYT 318



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>YO019_YEAST (Q99248) Uncharacterized protein YOR019W|
          Length = 730

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 10/21 (47%), Positives = 18/21 (85%)
 Frame = +3

Query: 141 LYQRKKLQWDERISTHKKWYT 203
           L++++KLQ +ER++  KKW+T
Sbjct: 176 LWRQRKLQINERLNDKKKWFT 196


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,293,186
Number of Sequences: 219361
Number of extensions: 859348
Number of successful extensions: 1967
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1967
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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