>DNAJ_BORBU (P28616) Chaperone protein dnaJ|
          Length = 364

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 240 NAFFTLKNDIHGAINSEC*KCLKINSQKSTT*AVC 344
           NA+F  KN+I+      C  CL   S+K T+ ++C
Sbjct: 131 NAYFGYKNNINITRQMLCDSCLGKKSEKGTSPSIC 165

>PRTP_SHV21 (P24911) Probable processing and transport protein|
          Length = 679

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/29 (37%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = -1

Query: 109 TSPCTR-KLLMYQIYLRCCISFNLKRCVL 26
           ++PC+R K +++Q Y  CC+S  +K C++
Sbjct: 100 SAPCSRHKSIVFQFYNNCCVS--VKMCII 126

>TGB2_LVX (P27331) TGB2 protein (Triple gene block 2 protein) (TGBp2) (12 kDa|
           protein) (ORF 3 protein)
          Length = 108

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -1

Query: 181 DGVTLFRYGVEHRSHQV*GGRRYWTSPCTRKLLMYQIYLRCCISFNLKRCVL 26
           DG    RYG  HRSH      + W +  T   ++  ++  C  +  + RCVL
Sbjct: 52  DGTKRIRYGGPHRSHVPELPAKSW-ALITVVAILIALHFSCLRTHRVHRCVL 102

>DNAJ_BORGA (Q661A4) Chaperone protein dnaJ|
          Length = 364

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 240 NAFFTLKNDIHGAINSEC*KCLKINSQKSTT*AVC 344
           NA+F  KN+I+      C  CL   S+K T+ ++C
Sbjct: 131 NAYFGYKNNINITRQILCHSCLGKKSEKGTSPSIC 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,320,813
Number of Sequences: 219361
Number of extensions: 1007113
Number of successful extensions: 1529
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)