>gb|AC163637.4| Mus musculus BAC clone RP23-186O3 from chromosome 9, complete sequence
          Length = 215370

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 326   tgagatctgggccagccatgac 347
             ||||||||||||||||||||||
Sbjct: 59052 tgagatctgggccagccatgac 59031

>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 80      aaattgcctgtcccaaaggtct 101
               ||||||||||||||||||||||
Sbjct: 1191939 aaattgcctgtcccaaaggtct 1191918

>gb|AC144688.3| Cercopithecus aethiops clone CH252-118C18, complete sequence
          Length = 128272

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 80   aaattgcctgtcccaaaggtct 101
            ||||||||||||||||||||||
Sbjct: 9609 aaattgcctgtcccaaaggtct 9588

>emb|AL662829.8| Mouse DNA sequence from clone RP23-188M15 on chromosome 4, complete
             sequence
          Length = 182069

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 363   aatacagctttcagaaatgcat 384
             ||||||||||||||||||||||
Sbjct: 45483 aatacagctttcagaaatgcat 45462

>emb|BX936445.8| Zebrafish DNA sequence from clone DKEY-50O12 in linkage group 6,
             complete sequence
          Length = 163720

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   caaggacagaaaagaagcaaa 138
             |||||||||||||||||||||
Sbjct: 54107 caaggacagaaaagaagcaaa 54087

>emb|CR847938.10| Zebrafish DNA sequence from clone DKEYP-30B3 in linkage group 6, complete
              sequence
          Length = 169257

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    caaggacagaaaagaagcaaa 138
              |||||||||||||||||||||
Sbjct: 162514 caaggacagaaaagaagcaaa 162534

>emb|AL161793.9| Human DNA sequence from clone RP11-23I7 on chromosome 1q32.1-32.3
              Contains the 5' end of the LRRN5 gene for leucine rich
              repeat neuronal 5 and a novel gene, complete sequence
          Length = 162345

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 77     gaaaaattgcctgtcccaaag 97
              |||||||||||||||||||||
Sbjct: 101857 gaaaaattgcctgtcccaaag 101877

>gb|AY091088.1| Arabidopsis thaliana At4g25290 mRNA sequence
          Length = 2481

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 7    aaccgtcatttttctttctga 27
            |||||||||||||||||||||
Sbjct: 2345 aaccgtcatttttctttctga 2365

>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63
          Length = 198777

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     aaccgtcatttttctttctga 27
             |||||||||||||||||||||
Sbjct: 23600 aaccgtcatttttctttctga 23580

>emb|AL035396.1|ATF24A6 Arabidopsis thaliana DNA chromosome 4, BAC clone  F24A6 (ESSAII
             project)
          Length = 92073

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     aaccgtcatttttctttctga 27
             |||||||||||||||||||||
Sbjct: 73788 aaccgtcatttttctttctga 73768

>emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, complete sequence
          Length = 116326

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   caaggacagaaaagaagcaaa 138
             |||||||||||||||||||||
Sbjct: 41318 caaggacagaaaagaagcaaa 41338

>gb|AC096675.2| Homo sapiens chromosome 1 clone RP11-80N9, complete sequence
          Length = 170467

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 77   gaaaaattgcctgtcccaaag 97
            |||||||||||||||||||||
Sbjct: 4251 gaaaaattgcctgtcccaaag 4271

>emb|BX255961.5| Zebrafish DNA sequence from clone DKEY-261N6 in linkage group 9, complete
              sequence
          Length = 176428

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 118    caaggacagaaaagaagcaaa 138
              |||||||||||||||||||||
Sbjct: 126206 caaggacagaaaagaagcaaa 126186

>emb|BX005129.6| Zebrafish DNA sequence from clone CH211-241D24 in linkage group 6,
              complete sequence
          Length = 166885

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    caaggacagaaaagaagcaaa 138
              |||||||||||||||||||||
Sbjct: 100215 caaggacagaaaagaagcaaa 100235

>emb|BX005335.9| Zebrafish DNA sequence from clone DKEY-240N8, complete sequence
          Length = 211094

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    caaggacagaaaagaagcaaa 138
              |||||||||||||||||||||
Sbjct: 136819 caaggacagaaaagaagcaaa 136839

>emb|CR855318.9| Zebrafish DNA sequence from clone DKEY-239I15 in linkage group 16,
             complete sequence
          Length = 150812

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   caaggacagaaaagaagcaaa 138
             |||||||||||||||||||||
Sbjct: 40575 caaggacagaaaagaagcaaa 40595

>gb|AC147027.4| Pan troglodytes BAC clone RP43-92F2 from 7, complete sequence
          Length = 162023

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   aaggacagaaaagaagcaaa 138
             ||||||||||||||||||||
Sbjct: 18241 aaggacagaaaagaagcaaa 18260

>gb|AC111733.5| Rattus norvegicus 13 BAC CH230-170L19 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 138366

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gaagcaaaccttctacaaca 150
             ||||||||||||||||||||
Sbjct: 70434 gaagcaaaccttctacaaca 70453

>gb|BC072041.1| Xenopus laevis hypothetical protein MGC78893, mRNA (cDNA clone
           MGC:78893 IMAGE:4174369), complete cds
          Length = 4181

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  gtcttcttcctcccctcaat 117
           ||||||||||||||||||||
Sbjct: 285 gtcttcttcctcccctcaat 304

>gb|AC161021.4| Pan troglodytes BAC clone CH251-2N24 from chromosome 7, complete
             sequence
          Length = 187139

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   aaggacagaaaagaagcaaa 138
             ||||||||||||||||||||
Sbjct: 60148 aaggacagaaaagaagcaaa 60167

>gb|AC161126.3| Pan troglodytes BAC clone CH251-595C13 from chromosome 7, complete
              sequence
          Length = 187683

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    aaggacagaaaagaagcaaa 138
              ||||||||||||||||||||
Sbjct: 140908 aaggacagaaaagaagcaaa 140927

>gb|AC053466.6| Homo sapiens chromosome 10 clone RP11-491G3, complete sequence
          Length = 172885

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     tcatttttctttctgaagaa 31
              ||||||||||||||||||||
Sbjct: 145457 tcatttttctttctgaagaa 145476

>gb|AC146046.3| Pan troglodytes BAC clone RP43-14H10 from 7, complete sequence
          Length = 155456

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   aaggacagaaaagaagcaaa 138
             ||||||||||||||||||||
Sbjct: 96305 aaggacagaaaagaagcaaa 96324

>gb|AC000058.1| Homo sapiens BAC clone CTB-111F10 from 7, complete sequence
          Length = 46419

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   aaggacagaaaagaagcaaa 138
             ||||||||||||||||||||
Sbjct: 25293 aaggacagaaaagaagcaaa 25312

>emb|AL355606.14| Human DNA sequence from clone RP11-90I7 on chromosome X Contains the gene
              for hepatocellular carcinoma-associated antigen 127
              (HCA127) (FLJ12856, FLJ12856, KIAA1166), complete sequence
          Length = 163283

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     aaaaattgcctgtcccaaag 97
              ||||||||||||||||||||
Sbjct: 152195 aaaaattgcctgtcccaaag 152176

>gb|AC027157.7| Homo sapiens chromosome 11, clone RP11-64I17, complete sequence
          Length = 158529

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     tcatttttctttctgaagaa 31
              ||||||||||||||||||||
Sbjct: 127260 tcatttttctttctgaagaa 127241

>gb|AC068185.9| Homo sapiens chromosome 11, clone RP11-330I10, complete sequence
          Length = 174189

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    tcatttttctttctgaagaa 31
             ||||||||||||||||||||
Sbjct: 17657 tcatttttctttctgaagaa 17638

>dbj|AK153669.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630040D24 product:hypothetical protein,
           full insert sequence
          Length = 3390

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 416 gtgtggggatatttctgtct 435
           ||||||||||||||||||||
Sbjct: 830 gtgtggggatatttctgtct 811

>gb|AC154217.2| Mus musculus BAC clone RP24-357L19 from chromosome 17, complete
             sequence
          Length = 183535

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   gaggtgggggaaaattgtca 177
             ||||||||||||||||||||
Sbjct: 99696 gaggtgggggaaaattgtca 99715

>gb|AC012368.6| Homo sapiens BAC clone RP11-547M24 from 2, complete sequence
          Length = 196206

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tcccaaaggtcttcttcctc 109
             ||||||||||||||||||||
Sbjct: 56628 tcccaaaggtcttcttcctc 56647

>gb|AC130304.12| Homo sapiens chromosome 8, clone RP11-205M5, complete sequence
          Length = 161953

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   tgacctgcctgccaagctgt 412
             ||||||||||||||||||||
Sbjct: 37466 tgacctgcctgccaagctgt 37485

>gb|AC167669.1| Mus musculus BAC clone RP24-138L8 from chromosome 13, complete sequence
          Length = 202905

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   gtgtggggatatttctgtct 435
             ||||||||||||||||||||
Sbjct: 46175 gtgtggggatatttctgtct 46156

>emb|BX649591.7| Zebrafish DNA sequence from clone CH211-181H6 in linkage group 20,
             complete sequence
          Length = 70838

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 118   caaggacagaaaagaagcaaacct 141
             ||||||||||||||||| ||||||
Sbjct: 60464 caaggacagaaaagaagtaaacct 60487

>emb|AL935325.14| Mouse DNA sequence from clone RP23-101O16 on chromosome 4, complete
             sequence
          Length = 133845

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    gaaaaattgcctgtcccaaa 96
             ||||||||||||||||||||
Sbjct: 44572 gaaaaattgcctgtcccaaa 44591

>emb|BX295541.1|HS172N19 Homo sapiens chromosome X PAC RP1-172N19 map Xq13 markers PHKA1-DXS227,
             complete sequence
          Length = 176589

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   ggacagaaaagaagcaaacc 140
             ||||||||||||||||||||
Sbjct: 12227 ggacagaaaagaagcaaacc 12208

>emb|CT025639.13| Mouse DNA sequence from clone RP23-233I11 on chromosome 13, complete
             sequence
          Length = 219226

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   gtgtggggatatttctgtct 435
             ||||||||||||||||||||
Sbjct: 54687 gtgtggggatatttctgtct 54706

>gb|AC137516.3| Mus musculus BAC clone RP23-259P18 from 1, complete sequence
          Length = 162037

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     aaaggtcttcttcctcccct 113
              ||||||||||||||||||||
Sbjct: 101163 aaaggtcttcttcctcccct 101144


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,451,241
Number of Sequences: 3902068
Number of extensions: 4451241
Number of successful extensions: 91284
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91210
Number of HSP's gapped (non-prelim): 74
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)