>gb|AY532594.1| Triticum aestivum minichromosomal maintenance factor (MCM2) mRNA,
            complete cds
          Length = 2923

 Score =  232 bits (117), Expect = 7e-58
 Identities = 170/190 (89%)
 Strand = Plus / Minus

                                                                        
Query: 202  gaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcatcca 261
            ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||||| |
Sbjct: 2923 gaggtcgattgagttgttatgccgcaactggatgcctgatgatcccacgcccttcatcga 2864

                                                                        
Query: 262  gaacaaagctgttgtcgttgaagtgagagctggnnnnnnngggcctcaaatcgtagatct 321
            | ||||||||||||||  |||||||||||||||        |||||||  ||||||||||
Sbjct: 2863 ggacaaagctgttgtcactgaagtgagagctggagaagaacggcctcaggtcgtagatct 2804

                                                                        
Query: 322  catattcttgggccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtg 381
            ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 2803 catattcttgggccttgttcttcaggtcatccactttaacctcaacgtgagtcaggcgtg 2744

                      
Query: 382  tggttgatcc 391
            ||||||||||
Sbjct: 2743 tggttgatcc 2734

>gb|AY532593.1| Triticum aestivum minichromosomal maintenance factor (MCM2) gene,
            exons 1 through 18 and complete sequence
          Length = 8809

 Score =  180 bits (91), Expect = 2e-42
 Identities = 142/159 (89%)
 Strand = Plus / Minus

                                                                        
Query: 12   aacactgaattatgacatcaagaaggtacaaacatctttaaatgccactggaggcacaag 71
            ||||||||||||||| |||||||||||||| ||||||  ||||||| ||| |||||||||
Sbjct: 8241 aacactgaattatgatatcaagaaggtacagacatctcgaaatgccgctgtaggcacaag 8182

                                                                        
Query: 72   ggtttcaaatagcaaacagtacaccaacaccaaaattcccgtaaaacagacacgagcagt 131
            ||||||| ||||||||||||||||||| | || || || |  ||||||||||| ||||||
Sbjct: 8181 ggtttcagatagcaaacagtacaccaatatcagaactctcacaaaacagacacaagcagt 8122

                                                   
Query: 132  cattttgccaacttacactacaaggggacatttctagct 170
            ||||||||| |||||||||||||| ||||||||||||||
Sbjct: 8121 cattttgccgacttacactacaagtggacatttctagct 8083



 Score =  137 bits (69), Expect = 3e-29
 Identities = 119/138 (86%)
 Strand = Plus / Minus

                                                                        
Query: 199  gctgaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcat 258
            ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
Sbjct: 8041 gctgatgttgattgagttgttatgctgcaactggatgcctgatgatcccacgcccttcgt 7982

                                                                        
Query: 259  ccagaacaaagctgttgtcgttgaagtgagagctggnnnnnnngggcctcaaatcgtaga 318
            |||| || |||||||||||| |||||||||||||||        |||||||  |||||||
Sbjct: 7981 ccaggacgaagctgttgtcgctgaagtgagagctggagaagaacggcctcaggtcgtaga 7922

                              
Query: 319  tctcatattcttgggcct 336
            |||| || ||||||||||
Sbjct: 7921 tctcgtactcttgggcct 7904



 Score =  109 bits (55), Expect = 7e-21
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                       
Query: 334  ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtgtggttgatccc 392
            |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 7796 ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtgcggttgatccc 7738



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 180  gctcttgaacaaagaggtagctg 202
            |||||||||||||||||||||||
Sbjct: 8085 gctcttgaacaaagaggtagctg 8063

>gb|AY109731.1| Zea mays CL9169_1 mRNA sequence
          Length = 623

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 132/162 (81%)
 Strand = Plus / Plus

                                                                       
Query: 230 tggatgcttgatgatcccacgcccttcatccagaacaaagctgttgtcgttgaagtgaga 289
           ||||||| |||||||||||||||||||||||||||  |||| ||||||  |||||   | 
Sbjct: 178 tggatgcctgatgatcccacgcccttcatccagaaggaagccgttgtccctgaagcacgc 237

                                                                       
Query: 290 gctggnnnnnnngggcctcaaatcgtagatctcatattcttgggccttgttcttcaggtc 349
           |||||        ||| ||| |||||||||||| |||||||||||||||||| |||||||
Sbjct: 238 gctggagaagaacggcttcagatcgtagatctcgtattcttgggccttgttcctcaggtc 297

                                                     
Query: 350 atccactttaacctcgacatgagtcaggcgtgtggttgatcc 391
            |||| ||| |||||||| ||||| || |||| || ||||||
Sbjct: 298 ctccaatttgacctcgacgtgagtaagacgtgaggctgatcc 339

>dbj|AK121422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N01, full
            insert sequence
          Length = 3214

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 330  tgggccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 379
            |||||||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 2857 tgggccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 2808

>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15,
              complete sequence
          Length = 149035

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 334    ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 379
              |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 102584 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 102539

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 334      ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 379
                |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 16461985 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 16461940

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 334      ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 379
                |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 16552989 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 16552944

>gb|AC144488.2| Gasterosteus aculeatus clone CH213-119K16, complete sequence
          Length = 217665

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 253   cttcatccagaacaaagctgtt 274
             ||||||||||||||||||||||
Sbjct: 92065 cttcatccagaacaaagctgtt 92044

>gb|AC144485.2| Gasterosteus aculeatus clone CH213-101E8, complete sequence
          Length = 203829

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 253    cttcatccagaacaaagctgtt 274
              ||||||||||||||||||||||
Sbjct: 120980 cttcatccagaacaaagctgtt 121001

>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence
          Length = 188853

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 190    aaagaggtagctgaggttgat 210
              |||||||||||||||||||||
Sbjct: 103298 aaagaggtagctgaggttgat 103318

>gb|AC069426.9| Homo sapiens 3 BAC RP11-200O17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128500

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 336   ttgttcttcaggtcatccactttaacctc 364
             ||||||||||||||| |||||| ||||||
Sbjct: 50709 ttgttcttcaggtcacccacttgaacctc 50737

>gb|AC130533.2| Mus musculus BAC clone RP23-211B19 from 8, complete sequence
          Length = 203431

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 66    cacaagggtttcaaatagcaa 86
             |||||||||||||||||||||
Sbjct: 90187 cacaagggtttcaaatagcaa 90167

>gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, complete sequence
          Length = 189308

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 44    catctttaaatgccactggaggca 67
             ||||||||||| ||||||||||||
Sbjct: 77476 catctttaaatcccactggaggca 77453

>gb|AC087761.6| Homo sapiens chromosome 15, clone RP11-2E17, complete sequence
          Length = 153740

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    acaaacatctttaaatgcca 58
             ||||||||||||||||||||
Sbjct: 58349 acaaacatctttaaatgcca 58368

>gb|AC012337.8| Homo sapiens chromosome , clone RP11-119O22, complete sequence
          Length = 171695

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     acaaacatctttaaatgcca 58
              ||||||||||||||||||||
Sbjct: 101665 acaaacatctttaaatgcca 101684

>emb|BX934130.2| Gallus gallus finished cDNA, clone ChEST267k10
          Length = 1947

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  gttcttcaggtcatccactt 357
            ||||||||||||||||||||
Sbjct: 1258 gttcttcaggtcatccactt 1277

>dbj|AP000040.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 11/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   tgctgctactggatgcttga 240
             ||||||||||||||||||||
Sbjct: 14249 tgctgctactggatgcttga 14268

>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete
             sequence
          Length = 192328

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   tgctgctactggatgcttga 240
             ||||||||||||||||||||
Sbjct: 50412 tgctgctactggatgcttga 50431

>emb|BX571671.3| Zebrafish DNA sequence from clone DKEY-153O22 in linkage group 20,
             complete sequence
          Length = 86323

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   cttcaggtcatccactttaa 360
             ||||||||||||||||||||
Sbjct: 16672 cttcaggtcatccactttaa 16691

>emb|BX322618.8| Zebrafish DNA sequence from clone CH211-265G21 in linkage group 20,
             complete sequence
          Length = 144211

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   cttcaggtcatccactttaa 360
             ||||||||||||||||||||
Sbjct: 71855 cttcaggtcatccactttaa 71836

>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    tgctgctactggatgcttga 240
              ||||||||||||||||||||
Sbjct: 179399 tgctgctactggatgcttga 179418

>dbj|AB056778.1| Macaca fascicularis brain cDNA clone:QccE-21094, full insert
           sequence
          Length = 1550

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 gaacaaagaggtagctgagg 205
           ||||||||||||||||||||
Sbjct: 727 gaacaaagaggtagctgagg 746

>dbj|AP000281.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:T1588, complete sequence
          Length = 66129

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   tgctgctactggatgcttga 240
             ||||||||||||||||||||
Sbjct: 58308 tgctgctactggatgcttga 58327

>dbj|AP000184.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 11/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   tgctgctactggatgcttga 240
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244

>dbj|AP000108.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 11/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   tgctgctactggatgcttga 240
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,193,700
Number of Sequences: 3902068
Number of extensions: 3193700
Number of successful extensions: 65225
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65131
Number of HSP's gapped (non-prelim): 93
length of query: 392
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 370
effective length of database: 17,147,199,772
effective search space: 6344463915640
effective search space used: 6344463915640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)